Basic Information

Insect: Noctua pronuba
Gene Symbol: -
Assembly: GCA_905220335.1
Location: LR999919.1:2561471-2600241[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0021 0.19 12.9 0.0 1 23 568 591 568 591 0.95

2 17 0.088 8.2 7.8 1.1 2 21 717 736 717 737 0.94

3 17 0.015 1.4 10.2 4.8 2 23 800 821 799 821 0.95

4 17 2.7 2.5e+02 3.1 0.8 1 23 833 857 833 857 0.89

5 17 0.00015 0.013 16.6 0.3 2 23 864 887 863 887 0.97

6 17 0.25 23 6.4 0.4 1 23 893 915 893 915 0.93

7 17 0.0038 0.35 12.1 2.9 1 23 921 943 921 943 0.98

8 17 0.13 12 7.3 0.6 1 19 953 971 953 974 0.92

9 17 0.094 8.7 7.7 0.2 1 23 1053 1075 1053 1075 0.97

10 17 2.3 2.1e+02 3.4 7.2 1 23 1082 1104 1082 1104 0.95

11 17 0.0015 0.14 13.3 1.8 1 23 1147 1170 1147 1170 0.95

12 17 0.00089 0.083 14.1 0.5 1 23 1177 1200 1177 1200 0.97

13 17 0.017 1.6 10.1 0.2 2 23 1222 1244 1221 1244 0.96

14 17 0.0015 0.14 13.4 3.0 3 23 1270 1291 1269 1291 0.95

15 17 0.00034 0.031 15.4 1.2 1 23 1316 1338 1316 1338 0.96

16 17 0.00014 0.013 16.7 0.1 1 23 1344 1366 1344 1366 0.97

17 17 0.00043 0.04 15.1 0.7 3 23 1374 1395 1372 1395 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0021	0.19	12.9	0.0	1	23	568	591	568	591	0.95
2	17	0.088	8.2	7.8	1.1	2	21	717	736	717	737	0.94
3	17	0.015	1.4	10.2	4.8	2	23	800	821	799	821	0.95
4	17	2.7	2.5e+02	3.1	0.8	1	23	833	857	833	857	0.89
5	17	0.00015	0.013	16.6	0.3	2	23	864	887	863	887	0.97
6	17	0.25	23	6.4	0.4	1	23	893	915	893	915	0.93
7	17	0.0038	0.35	12.1	2.9	1	23	921	943	921	943	0.98
8	17	0.13	12	7.3	0.6	1	19	953	971	953	974	0.92
9	17	0.094	8.7	7.7	0.2	1	23	1053	1075	1053	1075	0.97
10	17	2.3	2.1e+02	3.4	7.2	1	23	1082	1104	1082	1104	0.95
11	17	0.0015	0.14	13.3	1.8	1	23	1147	1170	1147	1170	0.95
12	17	0.00089	0.083	14.1	0.5	1	23	1177	1200	1177	1200	0.97
13	17	0.017	1.6	10.1	0.2	2	23	1222	1244	1221	1244	0.96
14	17	0.0015	0.14	13.4	3.0	3	23	1270	1291	1269	1291	0.95
15	17	0.00034	0.031	15.4	1.2	1	23	1316	1338	1316	1338	0.96
16	17	0.00014	0.013	16.7	0.1	1	23	1344	1366	1344	1366	0.97
17	17	0.00043	0.04	15.1	0.7	3	23	1374	1395	1372	1395	0.95

Sequence Information

Coding Sequence: ATGACGGAGGCGCAAGCACCTTTGATCCTGTGCATGGAGAACGCGACTGGCGAAGAGGTGGCACTCAGAATAGAACCCAATGATAATTTCCAGATGTTTCTGGATAAGGCCAGAACCCTCCTAGGCTACGACGTAGACATAAACTCGATAACCAGAAACCAACCCGTCTCACTATCTGAAAACGTCTACCAATTCCTTATCAACGCTGAACAGAACCTACAAGCAGACGAACTAACACAAAACTTTGATCCAATGTTGGACACCAATGATGGAGCCAACGACTTGGTCTACATATTGGACGATGGCACACAAATCCGTGCCTCTCAAATACATTTTGACAATGATGATCCTTTAGTAGACCTAACAGCTGAGAAGATACCTTTTGTTAAATACGCTGATGACATTACCGATGTAGATTTTGACGACATCGGTGTACATGAAACTGAAAAGTTTAATATATGCGAAAGTCCCGTGTCTCGATGGTCGAGTAAAAACTCCAGTCCAAAATGCAGCTTCGTCAATTCCTTACCGTTCAAATTAGTGTGCAATAATACATCCGGTTTCGAAGCTCAATTCACGAAATATTTAGAAGCTAATAACACTAAAACTTACGCGACTTTGAACCCTGTTACAACCAGAAATAAATCTCCAAAAAGTTTGATAAAGGACAATTTTAAGAACTATGATGATAGTTATCAGAGGAACGACAACTTGTCTTACACTCGAGAGGAGATCCTGAACATGTTTAAAGACTCCCCGATGACGTCATTGCCTTATGACCAGGGTTACAGTGAGAGGAGACATGTACGGAAAACTGACCCTTCAAGACTTGTTCATAAGACTTGGAGCAAGCCCCTTTCCTATGTCGATATAGACGGTGTTTTGATAGGAGAAAGTGAGAGCCAAATCTGTTTTATTTGCGGCAAACATGTGGATAACAACGTGGATAAATTGTACCTTTTCGATAATGAAGACCAGAGGTTACATAGATGTTCTCCGCAAAAGAAAATGTCGACGCAATTGAAAATTATCTGCGAATGTTGTCTCAACGAAAACTTTACTCCCTGTCGAATGAAAAGTGCTAACCAGTTCTTAAACCCAGATGAATATCTTGTAATTAGAAATAACCAGCAATACATCTTCCAAAAGGTGAAAAACTTCAATTTCGCGCACTTGGGGAAACCTAAAGAAACCATAACCAAGATAGAGAAGAAAATGGACAAAGAGGAGTTTGTTAAAGTCGAAATTGGTTCTGACGGAGAAATTATCACCAAACCCATAGACAATAGATCTGATGACGTCATAATAATTAAAGATGAGCATAAGGAGGGTAGTTCGAGTGACCTAGAGATTGTAGAGCCGGAACCGGAAATAGATAATATCATAGACAATTTGGAGGAGGCTGATGAGGAGGTGAAAGAGTTTCTGGGGAAATATCAAGTTGATGATAGTGAATCATTCACTTTTATCGCCATAACACAACAGCCGTATGAAACTCGCGTGCGCGCCTTTGACCTATCAGCTGTTAGCTGCGTGACGTCGTTCTGTCTGTCATTACTATCGTACCGTGCAACAGTAGGTAGGCAGTGGACCCGCGCGGCTCGCAAGCCCGAACCGTTCTGTGAGCAAATATTTCCAGATCTGACGGCAGTGGCAGATCACTGTGAAACTCACAAACATGACTTAGAGGATGGCGAAGTGTTTCCTTGTCCACTGTGTAATTATGGTTATGCAAATTTAAAATGGCTGAAGGCCCATGTGAAGGCGGCCCACGAAAAGACTGAAGCCCCAAAGGTATTAAAAGAAGAAAATGAAACAGTGAAAGAGGAGAATAAAGATGATGAAGAAACACCTACTAAAGCGTCATCACCTATCGCGACTCGCACTAGAAGTTCTAGCAAAAAAGATGATGGCGACAAAAAAGAGAATGAAAAGTCAGACGAAATAAAGGCTGATTCTAATACCGAGGCGGTGACCGAACCACCCATCATAAAAACGGAGGTAAAGCAAGAATGCTTGGACAGCAGCGAGGATGAGATCTGGATCGTTCAGACTGCTGATGTAGAAGCCACCAAGGAGCTGCAGAAACTACTGTGTAGTGCTAAGGTTAAAAAAGATGGGCAGGGGGGTGAAAGTGAGAAGACACCCAAATGTTTCAATTGCAGTCAAGTATTCGCGAACGCAGAAGGCTTATCAAACCATCGCTGTCGACGACGTAACCGGAAGCGGAAGTCCAAAGACCTGGTCAACCTCATATGTATACCTACTGAGGAAGACTTCTTGAAGAGAGCTCAGGGGCGCCCGCGACCACCTGATACAACGATAGACAACGATCTTCTCGTTATGCTTCCCCGAAAGCGTCGCAACCGGGAACCGACCTCCAACCCTCAAGTGGTCACCTGCCACAATTGTAACAAGTCATTCACATCCAAAGTTAGACTCAAGTTTCATATGCAATTCCACGAATCATCAAACCAAGCCCGAACAGACGGACGCTACTCTTGCTCCGAGTGCGACGACGCCACCTTCGGCACGGAGACGGAGCTGTTCGACCACGTGCACTTCCAGCATGACAAGCAGAAGAGGTGGCAGTGTCCCGTCGAGGGCTGCGGGAAGACTTTCTTCCTCAGGGCCACCCTTACAAAACACAGTCGCACGCACACAGACACGCGAAGATACGTGTGCGTCACGTGTAACAAGCGGTTCTTAGACAAGCAGACCCTGGATGAGCATGGAGTCACGCATTTACAGATCAAACCCTTCCAATGCCACATCTGTCTGAAGCAGCTGACCCGCCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGCCTGGTGTTCGTCTGTGCCGTCTGCACGAGGGCCTTCAGAGACCACCGGCATGCACAGGAGCACGCGACCAAATCGACGGAATGCATCGAAGCGTTTGCGAACGAGTTGAAAGAAGAGGCGGAAGAGGTATCCGTACAGTTATCTCCCACCAGCGGCCTTGTGAGACACGCCGTGGAGATTGTTGAATCACCAAAACTATCAAAGCCAATAAAACGCCAAGTATCAGCAGAGATAGCCTCCCCACTTCTGTCTCAGTTGGCAGATGAAGCGCGCGCTCTCATCAGGGTCGTCGAAATCGAGAAGGCGTTCCGATGCGAGTATTGTGAAGATGTGTTCTACCTGGAGAGCCGTCTGAACGCTCACCGCGCGATACACAAGGGCGTCAAGAATCCCTTCACTTGCCACATCTGTAAAGTTAGCTTCGCTACTTATTCCAGATGCACAACCCACAAAACCACACACGGCTTCTACAAGCGCTCACTAGCCGACGCGAAGAAGCAAGCCGACGGCCACGCACAGTCCGACGCCGACTCGGCTCGCTCCGCCACCGGCATACTGGGATACGGCGACTTTCCTGTAGTCAAACACTTCTTGTGCGAGGACTGTGGCCGCTCGTACCTGCACTGGACGTACCTACAAGTACACAGGCGCATGAAACACGCCAATGAAAACTTTCTGTACAACTGTAACCAGTGCGAGCTTACCTTTCCGAACAGTTGGAGCCTGGCTTACCATCGTAAGAAGGCGCACGGCAAGACCGGAGCCGAAGACCCTGGGAACACCAACAAGAATAATAGGGATGATTATAGGATACCATGTCGAGATTGTAGCGAGGTGCTGCCCAACAAAACAGCTCTGTACAAACACAGGAAGAAAGAACACAGCGATGGATCCACACGAGGATATTCTAAACCAGGCATGTATACGACTGCACAGTCGGAGTCTACGGGCGGCGCGTGCCCTCACTGTCAAGCCACGTTCACGCACGCTACAGACCTGCACAAACATGTCAAAGAGGCCCACGGCAAAGACGACGACTCCTGCCAATCCTGCAACAAGACATCGGTTGGCGAAGGGACATGCCCGCGCCGTCCGCACGCCTGTCCGGTCTGCGGACACGCCTTCCGGACACTGTCCATGCGGAACGAACATCTGAGAGTACATACTGGAGAGAGACCCTTTCCTTGTGATGTCTGTGGAGTCGCTTTCAGGAGGTCGACAGCCATGCGGAACCACCGACTCATCCACACCGGGGTCCGCGCGTGGGCATGCGGCCGCTGTCCCAAGCGCTTCCGCATCCGCTCCGACCTGCGCACACATCTGCGGCTCAAACATCCCGCTACCATCGTAGTTGTTGAGATGGAAGGCCTAAACCCGACTTCTGAAGAAGTACTGAAGACGCTCGCTGAACAAAACGTCCCACACGACAAACTAATAGATATCACTAAGATGTCCTTCGCCAAGGGCTCGACTAGCGTGATCCCGTCTTCTGCGCGCGCGCTCTCAGCTCTGAACAACGTGCCGCGCACGCACGTCGCGTGCATCAAGCCCGAGCCCACACGTATGTTGGAAGAGTTCCAACCCGCCCGTCGAGGTCGCGGCATCGCTAAGAACCCGCGGCGGCCCAAGATACTACAGCGAGGGGAGGACGACCCACAAGACAACTCTGCCTTCCCCATCGTTGGAGGACAGGAACTATCAGACCTGAACGTGCAGCTGTTGCTCCGTGACGGCGGCGTGCTCGTCAACGATAACCAGATGGTACAGCTTCAGCTAGATGACCCTATACTGATGGAGTAG
Protein Sequence: MTEAQAPLILCMENATGEEVALRIEPNDNFQMFLDKARTLLGYDVDINSITRNQPVSLSENVYQFLINAEQNLQADELTQNFDPMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADDITDVDFDDIGVHETEKFNICESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANNTKTYATLNPVTTRNKSPKSLIKDNFKNYDDSYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKTWSKPLSYVDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICECCLNENFTPCRMKSANQFLNPDEYLVIRNNQQYIFQKVKNFNFAHLGKPKETITKIEKKMDKEEFVKVEIGSDGEIITKPIDNRSDDVIIIKDEHKEGSSSDLEIVEPEPEIDNIIDNLEEADEEVKEFLGKYQVDDSESFTFIAITQQPYETRVRAFDLSAVSCVTSFCLSLLSYRATVGRQWTRAARKPEPFCEQIFPDLTAVADHCETHKHDLEDGEVFPCPLCNYGYANLKWLKAHVKAAHEKTEAPKVLKEENETVKEENKDDEETPTKASSPIATRTRSSSKKDDGDKKENEKSDEIKADSNTEAVTEPPIIKTEVKQECLDSSEDEIWIVQTADVEATKELQKLLCSAKVKKDGQGGESEKTPKCFNCSQVFANAEGLSNHRCRRRNRKRKSKDLVNLICIPTEEDFLKRAQGRPRPPDTTIDNDLLVMLPRKRRNREPTSNPQVVTCHNCNKSFTSKVRLKFHMQFHESSNQARTDGRYSCSECDDATFGTETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCNKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVFVCAVCTRAFRDHRHAQEHATKSTECIEAFANELKEEAEEVSVQLSPTSGLVRHAVEIVESPKLSKPIKRQVSAEIASPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESRLNAHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGHAQSDADSARSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYNCNQCELTFPNSWSLAYHRKKAHGKTGAEDPGNTNKNNRDDYRIPCRDCSEVLPNKTALYKHRKKEHSDGSTRGYSKPGMYTTAQSESTGGACPHCQATFTHATDLHKHVKEAHGKDDDSCQSCNKTSVGEGTCPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPTSEEVLKTLAEQNVPHDKLIDITKMSFAKGSTSVIPSSARALSALNNVPRTHVACIKPEPTRMLEEFQPARRGRGIAKNPRRPKILQRGEDDPQDNSAFPIVGGQELSDLNVQLLLRDGGVLVNDNQMVQLQLDDPILME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_01533383; iTF_00685747;
80% Identity: -