Xrho007879.1
Basic Information
- Insect
- Xestia rhomboidea
- Gene Symbol
- dmd-4
- Assembly
- GCA_963853795.1
- Location
- OY970761.1:11697715-11703974[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-24 1.1e-20 74.2 9.2 1 47 8 54 8 54 0.98 2 2 4 3.8e+04 -4.6 7.0 2 11 285 294 279 294 0.91
Sequence Information
- Coding Sequence
- ATGATGAATAGTGGGCGGGCCCGGGTCCCGAAGTGTGCACGGTGTCGAAACCATGGCCTGATCTCAAGTCTAAGAGGCCACAAGAAAGCTTGTGCCTACCGTCTTTGCCAATGCCCCAAGTGTGGTCTGATCAAGGAGAGGCAACGGATTATGGCCGCTCAGGTGGCATTAAAACGACAGCAAGCTGCAGAAGATAAGATAGCCTTACACTTGGCTTCCGTAGAAAGCGGAACGGCCCTAGACTCGCTTCCTCCGGGCCGGATATATGGGATGAGAGTCACCGGCCCTTGCCCAAGTCCTGGTCCGGAGCCGGATTCTGTCGCAGATGACCATACTCCCATCCACATCGACAGCGAGACGAGTGACTCTATGCCTGACTGTTGCACCGTTTCTCCCGATTCTGCTGGAAACTCTTCAGCATCTGCATCATTACGGGTGGGCGAAGAAGGTTCAGAGAGTGAGAACGCAGTGAGCACGGCTGGTCTAGAGATGCTGCGCAAGCTGTTCCCCGGCAAGAAGCGCTCCGTGCTTGAGCTGGTGCTGCGGCGCTGCAACCACGACCTGCTGCGAGCTGTCGAACATTTCAACGCTACACGAGATCAACGAGACAAAATACCAGGACTCAGCTCGGGCAGTTACGACGCCTCCGTGTCCAGTTCTGAGGAAGTAGAGGCGAGGTGGTCAGCATTCCGTCCAGTGGGGCCTCGCGCTCCAATATTACCAGCATTGGTCATGGGCAGGGTGTGTGGCTCTGATTGGCTCATACCGATGCCGGCTCTCCCCGCGCTGTCGGGCCCACTACTTCTACCCCTGCAGCATCCACATGCCCCACCGCCGTCTTGCAACCCTTGCTCCCCCGACTGCAGGCAGTGCAACCACCATTAG
- Protein Sequence
- MMNSGRARVPKCARCRNHGLISSLRGHKKACAYRLCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTALDSLPPGRIYGMRVTGPCPSPGPEPDSVADDHTPIHIDSETSDSMPDCCTVSPDSAGNSSASASLRVGEEGSESENAVSTAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHFNATRDQRDKIPGLSSGSYDASVSSSEEVEARWSAFRPVGPRAPILPALVMGRVCGSDWLIPMPALPALSGPLLLPLQHPHAPPPSCNPCSPDCRQCNHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00157251;
- 90% Identity
- iTF_00018212; iTF_00037866; iTF_01363150; iTF_01532065; iTF_01094090; iTF_01527278; iTF_00928755; iTF_01534881; iTF_00667534; iTF_01533984; iTF_00040867; iTF_01362467; iTF_00123428; iTF_00124322; iTF_00147506; iTF_00121493; iTF_00177178; iTF_01247034; iTF_01026244; iTF_01029319; iTF_01030288; iTF_01028345; iTF_00888315; iTF_01031195; iTF_01062852; iTF_00041827; iTF_00449156; iTF_01063812; iTF_00111717; iTF_01085286; iTF_00375271; iTF_00771977; iTF_00726410; iTF_00758218; iTF_01064714; iTF_00850796; iTF_00122447; iTF_00951887; iTF_00446192; iTF_01117264; iTF_00445233; iTF_00173010; iTF_00302162; iTF_00745748; iTF_01061940; iTF_00071477; iTF_00907094; iTF_01094966; iTF_00039863; iTF_00952759; iTF_01119384; iTF_00374169; iTF_00447194; iTF_01118363; iTF_00906204; iTF_01084316; iTF_01192764; iTF_00907936; iTF_01340164; iTF_01338809; iTF_00042682; iTF_00785253; iTF_01230633; iTF_01285591; iTF_00786043; iTF_00809189; iTF_00810118; iTF_00273650; iTF_01361672; iTF_00300265; iTF_00301226; iTF_00831275; iTF_00043552; iTF_01538796; iTF_00017386; iTF_00274477; iTF_00851853; iTF_01377518; iTF_00072176; iTF_00685492; iTF_01221622; iTF_00185360; iTF_01260152; iTF_01441145; iTF_01439986; iTF_01342268; iTF_00049954; iTF_00186229; iTF_00327131; iTF_01487743; iTF_00924733; iTF_00237630; iTF_01425112; iTF_00425439; iTF_00000384; iTF_00001223; iTF_01264661; iTF_01076547; iTF_00383708;
- 80% Identity
- -