Ctra003144.1
Basic Information
- Insect
- Cosmia trapezina
- Gene Symbol
- dmd-4
- Assembly
- GCA_905163495.1
- Location
- LR991020.1:18642793-18654047[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-24 1.6e-20 74.2 9.2 1 47 8 54 8 54 0.98 2 2 6 5.3e+04 -6.0 8.5 2 11 286 295 279 295 0.89
Sequence Information
- Coding Sequence
- ATGATGAACAGTGGGCGTGCCCGGGTCCCAAAGTGTGCACGGTGTCGAAATCATGGCCTGATTTCAAGTCTAAGAGGACACAAGAAAGCTTGTGCCTACCGACTCTGCCAATGCCCTAAGTGTGGCCTGATCAAAGAAAGGCAACGGATTATGGCGGCTCAGGTGGCATTAAAACGCCAGCAAGCTGCAGAAGATAAAATAGCCTTACACTTGGCTTCCGTAGAAAGTGGAACGGCGCTAGACACTCTACCACCAGGCAGAATATATGGGATGCGAGTCACCGGCCCTTGCCCAAGTCCTGGACCGGAGCCGGATTCTGTCGCTGATGATCATACTCCAATCCACATCGACAGCGAGACGAGCGATTCTATGCCCGACTGTTGCACAGTTTCACCCGATTCTGCTGGAAACTCTTCAGCGTCTGCTTCATTACGAGTGGGAGAAGAAGGTTCCGAAAGTGAGAATGCAGTGAGCACGGCTGGTCTGGAGATGCTACGCAAGTTGTTTCCCGGCAAGAAGCGCTCCGTGCTCGAGCTGGTGCTGAGGCGCTGCAACCACGACCTGCTGCGAGCTGTTGAACACTTTAATGCTACACGCGATCAACGAGACAAAATACCAGGACTCAGCTCGAGCAGCGGGTACGAGGCCTCCGTGTCCAGTTCTGAGGAAATAGAGTCGAGGTGGTCAGCATTCCGTCCGGTAGGACCGCGAGCTCCGATACTGCCAGCATTGGTCATGGGCAGGGTGTGTGGCTCTGATTGGCTCATACCGATGCCAGCACTGCCCACGCTATCAGGGCCACTACTTTTCCCACTGCAGCATCCACACGCGCCACCCCCGACGTGCAACCCTTGCTCCCCCGACTGTAGGCAGTGCAACCATCATTAG
- Protein Sequence
- MMNSGRARVPKCARCRNHGLISSLRGHKKACAYRLCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTALDTLPPGRIYGMRVTGPCPSPGPEPDSVADDHTPIHIDSETSDSMPDCCTVSPDSAGNSSASASLRVGEEGSESENAVSTAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHFNATRDQRDKIPGLSSSSGYEASVSSSEEIESRWSAFRPVGPRAPILPALVMGRVCGSDWLIPMPALPTLSGPLLFPLQHPHAPPPTCNPCSPDCRQCNHH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00157251;
- 90% Identity
- iTF_01533099;
- 80% Identity
- -