Xash030599.2
Basic Information
- Insect
- Xestia ashworthii
- Gene Symbol
- retn
- Assembly
- GCA_950022955.1
- Location
- OX465563.1:8497363-8505487[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 7.1e-16 59.9 0.0 16 89 6 77 2 77 0.94 2 2 3.2 1.7e+04 -2.2 0.0 25 38 204 217 166 220 0.55
Sequence Information
- Coding Sequence
- ATGATGGATATCAGCAGATGCACTCCAATCAACCGGTTACCAATAATGGCGAAGTCGGTGCTAGACCTGTACGAGCTGTACAACCTGGTGATAGCTCGCGGTGGGCTGGTGGAAGTCATCAACAAGAAGCTGTGGCAGGAGATCATAAAGGGGCTGCGGCTCCCGTCGTCCATCACGTCTGCTGCCTTCACGTTGCGCACACAATACATGAAATACCTGTATGACTACGAGTGCGAGAAGAAGAACCTATCAACCAGGAGTGAGCTGGACGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGCCGCGCCTCGGGGCAGTATGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCACTGGGAGGCGTGGCCCCGCGCCTGCCACCACTGCCGCCGCATGCGCCTCACCTGGCGCAGCACGACATCGAGTACAGGGTGCGCGAATACATGAAGATGATACAGCAGCAAAGGGAGCTTATGAGAAATGGCTCCGAATCACCCCCCAGCAACGGCCAAGCGCCAATAATGTCGCCCCGCGACGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACCCTCTGGTCGCTCTacaacaataacaacaacaacagccCACAACCGGACCTAGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTGACGAGTGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCTTACCGGCCGCCAAGCGCCGCACGCCGCGCCCCGCCTCCCGCCCCGCCTCTCCCCGCGACCACCTGCACTCGCCGCCACAGCACCGCCACAGCCGCAGGGACGCCACGTCACCGCCACAGATCAACGGCATGCCCAACACTAATGGTGTCAATGGAGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTAGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTTTTCCCCTCAGGCAATGGTCAGAACGGACACAGACAAATGGTGTcctaa
- Protein Sequence
- MMDISRCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPLPAAKRRTPRPASRPASPRDHLHSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -