Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947086425.1
Location
OX352216.1:6036535-6061910[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-24 2.3e-21 76.2 0.0 2 89 101 184 100 184 0.93
2 2 4.3 1e+04 -2.8 0.0 45 68 1285 1309 1273 1323 0.66

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACTAATGTGGAAGTTAATATGGGGGACTCGGCGTCCCCCATGAAACCGGACAACTTCACGTTCACGCCGCCGCCGGAGGCCCCGGTGTTCGAGCCCACGGCCGAGGAGTTCTTGGACCCCTTGGCGTACATCAGCAAGATACGGCCCATCGCCGAGAAGTCGGGCATCTGCAAGATAAAACCTCCTGCGCATTGGCAGCCACCGTTTGCCGTGGACGTAGACCGTCTGCGGTTCACGCCCAGGATCCAGAGGTTGAACGAGCTAGAGGCCATAACCCGAGTGAAGTTGAACTTCCTCGACCAGATCATAAAGTTCTGGGAGCTGCAGGGCTCCGTTCTGAAGATCCCCACGGTGGAGCGGAAGCCACTTGACCTGTACGCATTGCACAAAGTTGTGCAGGATGCTGGTGGTTTCGAAGTTTGCTCAGCGGAACGCAAATGGTCCAAGATCGCGCGTCGCATGGGCCACCCCCAGGGCAAGGGTATTGGATCCATCTTGAAGAATCATTACGAAAGGATCCTGTATCCTTATGATGTGTTCAAGAACAATGGTGTTGTTGGAGATAATAAGGAGACTAAGATAGAAGTGAAACGCGAACAAACTCCAGAGTCAGGTCGCGCTCGCTCCGCGTCCAAATGTCCCGCGGCGACCCCCCCTCCCCCCGCCTCCCCCGCCAGACGGTACAAGGCAGAGCCGGAGCCGGCGGCGGAAGGGAGTCACACAGAGGGTGCTTTACCACCCAACAATGATAAGGGTATGAAGACACCGGTCAAAGAAGAAAGCCCCGAGACTAATAGACGGAGTCCCCGCGAGAACAAGTGGATGTCCGGAACGGGCAGCTGCGGCTCCCGCGGGCGCGTGACCCGCTCCACTCGTCTCCGCGAGCACCGCATGTCCAACATGACGGTGTCGGTGACCCCCGCGCCCCCGCCCGGCGCCCCCCCGCCCATCACCAGCGTACACGATCCTCTGGCAAAGTACATGTGCCACGTTTGCGGTCGCGGTGACGTGGAGGAACAGATGTTATTGTGTGATGGATGCGACGACTCCTACCACACCTTCTGCCTGCTGCCTCCGTTGGCAGACGTGCCTAAAGGCGACTGGCGCTGCCCGGTCTGCTTGGCTGAAGCGGTATCAAAGCCAACGGAGGCTTTCGGCTTCGAGCAAGCGTCGCGAGAGTACACGCTGCAACAGTTTGGAGAAATGGCGGATCAGTTCAAATCCGACTACTTCAATATGCCCGTACATATGGTGCCGACGTCGACAGTGGAGCGGGAGTTTTGGCGCGTCGTGTCTTCAATCGATGAGGACGTAACAGTCGAGTACGGAGCCGATCTACACTCTATGGACCATGGTTCTGGTTTCCCAACAAAGTCCAGCGCCCACCTGTACCCGGGCGAGCAGCAGTACGCAGACTCCAGCTGGAACCTCAACAACCTGCCCGTGCTGGAGGGTTCCGTGCTGGGGCACATCAACGCTGACATATCCGGCATGAAGATTCCATGGCTGTACGTGGGCATGTGTTTCGCGACATTCTGCTGGCACAATGAGGATCACTGGAGCTATTCCATCAACTATCTACATTGGGGAGAGCCCAAGACTTGGTACGGAGTGCCGAGTTCAAAAGCGGAACAGTTCGAGGCTGCCATGAAGGCGGAGGCTCCCGAGCTGTTCCAGCTGCAGCCGGACCTGCTGCACCAGCTCGTCACCATCATGAACCCCAACGTGCTCATGAAGGCAGGAGTGCCAGTATACAGAATGGACCAGCACGCGGGTGAATTCGTGATAACATTCCCGCGCGCGTACCACGCCGGCTTCAACCAGGGATATAACTTCGCGGAGGCCGTCAACTTCACGCCCCCTGATTGGTTAAAAATGGGCCGAGAATGCGTCCTTCACTACTCAACTCTCCGCCGCTACTGCGTCTTCTCTCACGACGAGTTGGTTTGCAAGATGGCGCTCGAAGCAGACTCTTTGAGCCTCACGGTAGCACTAGCGGCCTATAGGGACATGCGGACCATGCTGCATACTGAGAGGAAGCTGAGGAAGAATATACTGCACTGGGGTGTGACAGAAGCGGAGCGCGAAGCATTCGAGCTGCTCCCGGACGACAGCCGGCAGTGCATCTCGTGCAAGACGACGTGCTTCCTGTCGTGCGTCACGTGCGCCTGCACGCCGCACGTCGCCTGTCTGCGACACGCCGCCGCGCTCTGCGCCTGCGCACCCAGCAACCATAGACTCAGATACCGCTACACCCTGGACGAGCTCCCCGCTATGCTGGAGAAGCTCAAGAAGAAGTCGGAACAGTTCCGCGAATGGGCGGAGGGGGTTCAGAACGCACTCGATCCCGAAACGCCCAAGACCTGCGACCTGGACGGGTTGAGAGCGCACCTGCATCGGGCTACTGAACTCAAGATGCAAAAGACGGAGCTAGTCCGCGCCCTCGAGACCGCCATCGAGGACGCGGAGAAGTGCGCCTCCGTGATCCAGCAGCTGGACCTCAACAAGATGCGCACGCGCACGCGGCACCACGACCCCAAGTACAGGCTCTCTGTACACGAGCTCACGCTCTTTGCTGCGGAGATAGATAGCCTGGCTTGTGTTCTACCTGAAGGATCTGCCGTAAAGGAAGTACTTCGTCAGACGTCAGAGTTCGAGGCGCGCTCCACTGATCTGCTCAACAGGGACCTGGAGAAGGTTGATACGGCATACGTCAGGGAATTGGAAGAGACTGTAGAACTAGGCGGCCGTCTCTGCATAGTCCTGCCACAGCTCGAAGCGTTAACCGTCCGCCTGGCGCAAGCTCGCTGGCTGGAAGACTCGCAGCATCACAGAGACAACTGCAACTCACTCACACCAGCTGTCCTCACTCAGCTGCTGGCCAAGACTGAGGGACTGTTGCCTCATGTCGCTATAGAGAAGGAGCGGGCTATACTCTACAAACTACAAGCGGAAGTGGAAGAATGGGAGAAGAAAGCCCAATCGGTCCTCATCGACACAAGCAAACCGCTCGATGAAGACGACTCTGAATACAACACCATCTCCGAGCTGACGCAGTTGTTGGATGAAGGGTCGGACATTGAAGCCGCCTTGCCTTCCTACCACACATTGCAGACCGCCATCACGCATGCCAAGGATTGGCTCAACAAGGTGGAAGAAATGCAGTCAAAAGACTTATACCCCTACATGCACAGCGTAGAAGTATTGGTGAAGAAAAGCCAGGCGCTGCCGCTAGCGTTGCTAGAGAAGCAACAGTTAGCCAGCGCCTTACAATCAGCGAGGGATTGGCAACGCGGCGCCGCTGAGATGTTCCTTAAGAAAACAACGCCAGATAAGAAGAACTACCCCCACACGTTACTAGAAGCCCTCTCCCCCCGCACCACCCCTTCAGGCAATCGTCGTCGCACACAACCCTCGCTGGAAACTACCCTCTTCTTGGACAAGTTTAATGAAGAGTCCACGCCTACGGAGATAGTGGCGGCTTTTAAACAAGCTGAGACACGGGAATTGCAAGCTATTAAGGAGCTTAGAGCCCGAAATATGCGTAAGGATGTGCGCGCGCCGCCGGCTACTACGATTACATTCTGCATCTGTCAGAAACGACAGTACGGCGTTATGACGCAATGCGAGCTATGCAAGGATTGGTTCCATGCGTCATGCATCGCGAACGCGCGTGACGACCGCGAGGAGTCTCCTGACCGCGAAGGCTTCCCCTCCAGCGAGTCCAAGTTCCTCTGTCCCGACTGCGTGCGCACCAAGCGACCTCGTCTGGACAGGATACTGGCACTTCTAGTGTGGCTACAGAAGCTGCCGGTCCGTCTGGCGGAGGGCGAAGCCCTACAATGCGTGACGGAGCGCGCGATGGCGTGGCAGGACCAGGCCCGCGCTATGCTGGCGCAGCCGCATCATGTGCACTCGCATCAGGCGAGCAGAGAAAAAGCAGACAAATTGAACGCAGAACTAAAGAAAGCAACGGGAAGAGGTCACGAAAACTCAAGATCATCAGCATCAGTGGAGCACGCCTACAGCGCCTCGCCCCGCTCACCAGGCTCACGCCTGCCGCCCGCCGCGCTGCACAAACTGGAAGATCTCATGCTGGAAGGTGATCTACTTGAGGTGGTGTTAGAAGAACAGCAGCATGTGTGGGAGGCAGTGAGCCTGGCTCGCGGCGCGGCCGGGAGACGCGGCGCCAGGGTGCTGGACGCCGGGAGACGGAAGAGACCGCGCGCGCCGCCGCCCAGGTCCGCCAAGAGGACCAGGAACCATCATGCTGCTGGTCCATCAACATCATCATCGACAGCGGCGGCTCCGACGTCGACGAAGCCGTCGACATCCTCCAAGCGCGGTGGGGCTACCACCACAAACTATCTGAACAGGAAACAGGGATTGTCATCAGCATCTGGTCTGATGATGAGAAAACACTACATGGCTCGCCAGGAGCGGAGGAAACGCGGCGTCTCTACCAGACATAGAGGGTCGACTCGCGGCGGAACCAGTGCATCATCAGGTCGCGCCCCACAGGACAGCAGTACCTCCTCCATGTCCTCGGGAGAAGACGAAGACGACTGCGCGGCGGTCAACTGTCTGCGACCAACTGGCAAAGAGGTGGACTGGGTGCAATGCGACGGCGGCTGCGACGAATGGTTCCACATGCACTGCGTGGGCGTCATCAAGGGAACGCTCGGGGAGAACGATGACTACGTCTGCGGATCGTGCGCTAAAGACAACAAGCAGTGA
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKVVQDAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKNNGVVGDNKETKIEVKREQTPESGRARSASKCPAATPPPPASPARRYKAEPEPAAEGSHTEGALPPNNDKGMKTPVKEESPETNRRSPRENKWMSGTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPPGAPPPITSVHDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEAVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPPDWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHTERKLRKNILHWGVTEAEREAFELLPDDSRQCISCKTTCFLSCVTCACTPHVACLRHAAALCACAPSNHRLRYRYTLDELPAMLEKLKKKSEQFREWAEGVQNALDPETPKTCDLDGLRAHLHRATELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSVHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFEARSTDLLNRDLEKVDTAYVRELEETVELGGRLCIVLPQLEALTVRLAQARWLEDSQHHRDNCNSLTPAVLTQLLAKTEGLLPHVAIEKERAILYKLQAEVEEWEKKAQSVLIDTSKPLDEDDSEYNTISELTQLLDEGSDIEAALPSYHTLQTAITHAKDWLNKVEEMQSKDLYPYMHSVEVLVKKSQALPLALLEKQQLASALQSARDWQRGAAEMFLKKTTPDKKNYPHTLLEALSPRTTPSGNRRRTQPSLETTLFLDKFNEESTPTEIVAAFKQAETRELQAIKELRARNMRKDVRAPPATTITFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPSSESKFLCPDCVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDQARAMLAQPHHVHSHQASREKADKLNAELKKATGRGHENSRSSASVEHAYSASPRSPGSRLPPAALHKLEDLMLEGDLLEVVLEEQQHVWEAVSLARGAAGRRGARVLDAGRRKRPRAPPPRSAKRTRNHHAAGPSTSSSTAAAPTSTKPSTSSKRGGATTTNYLNRKQGLSSASGLMMRKHYMARQERRKRGVSTRHRGSTRGGTSASSGRAPQDSSTSSMSSGEDEDDCAAVNCLRPTGKEVDWVQCDGGCDEWFHMHCVGVIKGTLGENDDYVCGSCAKDNKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
iTF_01528061; iTF_00662014;
80% Identity
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