Basic Information

Gene Symbol
Kdm5
Assembly
GCA_951394285.1
Location
OX596161.1:7227883-7263166[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-24 3.6e-21 75.8 0.0 2 89 101 184 100 184 0.93
2 2 4.2 9.5e+03 -2.5 0.1 45 68 1364 1388 1351 1404 0.65

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACTAATGTGGAAGTTAATATGGGGGACTCGGCGTCCCCCATGAAACCGGATAACTTCACGTTCACGCCGCCGCCGGAGGCCCCGGTGTTCGAGCCCACCGCCGAGGAGTTCCTGGACCCCTTGGCGTACATAAGCAAGATTCGTCCCATCGCCGAGAAGTCAGGCATCTGCAAGATAAAACCTCCTGCGCATTGGCAGCCCCCGTTCGCCGTAGACGTAGACCGGCTGCGGTTCACGCCGAGGATCCAAAGGCTGAATGAGCTGGAGGCCATCACCCGAGTGAAGCTGAACTTCCTCGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCTCCGTGCTGAAGATCCCCACGGTGGAACGGAAGCCGTTGGATCTGTATGCGCTGCACAAAGTCGTGAAAGAAGCTGGTGGCTTCGAGGTGTGTTCAGCGGAGCGCAAATGGTCGAAGATCGCGCGCCGCATGGGCCACCCCCAAGGGAAGGGCATCGGCTCCATCCTCAAGAACCATTACGAGAGGATCCTGTACCCGTACGATGTGTTCAAGAGTAATGGAGCTATTGGAGATAATAAGGAGACTAAGATAGAAGTGAAACGCGAACAAACCCCAGAAGCAGGCCGCGCCCGCTCGGCCTCCAAGTGCACCGCGGCGACCCCCCCGCCGCCCGCGTCCCCCGCGCGCCGCTACAAGTCGGAGCCCGAGCCCGCGGCTGAAGGCAGCCACACTGAGGGCGCCCTGCCCCCCAACAATGATAAGGGGATGAAGACGCCGGTTAAGGAGGAGAGCCCCGAGACTAACAGACGAAGTCCCCGCGAAAACAAATGGATGTCAGGAACCGGCAGCTGCGGTTCCCGTGGTCGCGTAACCCGTTCCACGCGCCTTCGTGAGCACCGCATGTCCAACATGACGGTGTCAGTGACGCCCGCGCCTCCGCCCGGCGCGCCCGACGCCGGCGCCGTCATCTCCCCCCACGACCCGTTGGCAAAATACATGTGCCACGTGTGCGGCCGCGGGGACGTTGAGGAACAGATGCTTCTGTGCGACGGTTGTGATGACTCATACCACACCTTCTGCCTGCTGCCGCCGCTGGCTGACGTGCCTAAAGGGGACTGGCGATGTCCCGTCTGTTTGGCTGAAGCGGTGTCAAAACCCACAGAAGCGTTTGGCTTCGAACAAGCGTCGCGCGAATACACACTACAGCAGTTCGGAGAAATGGCAGATCAATTCAAATCTGACTATTTCAACATGCCTGTACATATGGTGCCAACTTCAACAGTAGAGCGGGAGTTCTGGCGCGTTGTTTCTTCTATTGACGAGGATGTAACAGTGGAATATGGTGCAGATCTACACTCAATGGACCATGGATCTGGTTTTCCAACAAAATCCAGCGCTCACTTATACCCAGGCGAGCAACAGTATGCGGAGTCCAGCTGGAACCTCAACAACCTGCCCGTTCTAGAAGGTTCTGTGCTGGGGCACATCAACGCTGATATATCTGGCATGAAGATCCCATGGCTGTATGTGGGCATGTGTTTCGCAACTTTCTGCTGGCACAATGAAGACCACTGGAGCTATTCCATCAACTACCTTCATTGGGGAGAACCTAAGACTTGGTACGGAGTCCCGAGCTCCAAAGCCGAGCAGTTCGAAGCAGCCATGAAGGCAGAAGCCCCGGAGCTGTTCCAGCTGCAGCCGGACCTGCTGCATCAGCTCGTCACCATCATGAACCCTAATGTGCTGATGAAGGCAGGAGTTCCGGTCTATAGAATGGACCAGCACGCGGGTGAGTTCGTGATAACGTTCCCGCGCGCCTACCACGCGGGGTTCAACCAGGGGTACAACTTCGCAGAGGCCGTCAACTTCACGCCGGCCGACTGGttaaAAATGGGCAGAGAATGCGTCCTCCATTACTCAACTCTCCGCCGCTACTGCGTGTTCTCCCACGACGAGCTGGTCTGCAAGATGGCGCTGGAGGCCGACTCCCTGAGCCTGACGGTGGCGCTGGCGGCCTACAGGGACATGCGCACCATGCTGCATGCTGAGAGGAAGCTGAGGAAGAATATCCTGCACTGGGGTGTAACAGAAGCGGAGCGGGAAGCTTTCGAGCTGCTGCCTGATGACTCGCGACAATGCGTGTCGTGCAAAACCACGTGCTTCTTGTCGTGCGTCACGTGCTCGTGCACGCCGCACGTGGCCTGCCTGCGCCACGCCGCCGAGCTCTGCGCCTGCGCACCCGCCGCGCACAGACTCAGATACCGGTACACCCTAGACGAGCTGCCAGCAATGCTGGAGAAGCTGAAGAAGAAGTCGCAGCAGTTCCACGAGTGGGCAGAAGGCGTCCAGAATGCTCTCGACCCTGACACCCCCAAGACCTGCGACCTGGATGGACTTCGAGCGCATCTACAGCGAGCCTCGGAACTCAAGATGCAGAAGACCGAGCTGGTCCGAGCCCTGGAGACAGCCATCGAGGACGCGGAGAAGTGCGCCTCAGTGATCCAACAGCTGGATCTGAACAAGatgcgcacgcgcacgcgGCACCACGACCCCAAGTACCGGCTCTCTATACACGAGCTGACTCTCTTTGCGGCGGAGATCGACAGTCTGGCTTGTGTGCTGCCTGAAGgatCGGCGGTGAAGGAAGTACTGCGTCAGACATCAGAGTTTGAGATGCGCTCCACTGAACTCCTCAATAAGGACTTGGAGAAGATAGATACGGCGTACGTCAGGGAGATGGAAGAGACGGTAGAACTAGGCGGGCGCCTCTGCATAGTGCTCCCCCAACTGGAAGCCCTGAGCGTCCGGCTCGCGCAGGCTCGCTGGCTGGAGGACTCGCAGCACCACCGGGACAACTGCAACTCGCTGACCCCGGCCGTACTGACCCAGCTGCTGGCCAAGGCGGAGGACCTGCTGCCACATGTTGCTATTGAGAAGGAACGGGCTGTACTCTACAAACTGCAAGCGGAAGTAGAAGAATGGGAGCAGAAAGCCCAGGCGGTGCTCATCGACACAAGCAAACCCATCGACGACGACGATACCCAGTACAGTACCATCACTGAACTAACGCAGCTGTTGGCCGAAGGATCCGATATAGAGGCCGCGTTGCCTTCTTATCACACGCTGCAGACTGCTATCACGCATGCTAAGGATTGGCTGAACAagGTGGAAGAAATGCAGTCCAAAGACCTGTACCCCTACATGCACAGCGTGGAGACCCTGGTCAAGAAGAGTCAATCTCTCCCTCTGGCGTTGTTGGAGAAGCAGCAGTTGGCCAGCGCGCTACAATCTGCACGAGACTGGCAACGTGGAGCCGCTGAGATGTTCCTGAAGAAAAGCACACCGGACAAGAAGaACTACCCCCACACGCTTCTAGAAGCTCTTTCCCCCCGCACCACCCCCTCGGGGGGTCGTCGACGTACTCAACCCTCGTTGGAAACTACCCTCTTCTTGGACAAGTTTAATGAGGAGTCCACGCCTACAGAGATTGTAGCTGCGTTTAAACAGGCTGAAACGCGCGAGCTTCAAGCTATCAAGGAGCTTAGAGCAAGAAACATGCGCAAAGACGTGCGCGCGCCACCCGCGACTAGCGTTACATTCTGCATCTGTCAGAAGCGGCAGTATGGCGTTATGACGCAATGTGAACTCTGCAAGGATTGGTTCCATGCGTCGTGCATAGCTAACGCGCGCGACGACCGCGAAGAGTCCCCAGACCGCGAGGGTTTCCCCGGCAGCGACTCCAAGTTCCTGTGCCCAGACTGCGTGAGGACCAAGCGGCCCCGCCTCGACAGGATCCTGGCTCTGCTCAAAGTCCCCAGACCGCGAGGGTTTCCCCGGCAGCGACTCCAAGTTCCTGTGCCCAGACTGCGTGAGGACCAAGCGGCCCCGCCTCGACAGGATCCTGGCTCTGCTCGTGAGTACTGTACACATAGAAAGTCCCCAGACCGCGAGGGTTTCCCCGGCAGCGACTCCAAGTTCCTGTGCCCAGACTGCGTGAGGACCAAGCGGCCCCGCCTCGACAGGATCCTGGCTCTGCTCGTTTGGCTACAGAAACTGCCCGTCCGCCTGGCGGAGGGCGAAGCCCTACAGTGCGTGACGGAGCGCGCGATGGCCTGGCAGGACCAAGCTCGCGCCATGTTGTCGCAGCCGCATCAGTTACACTCGCATCAGGCGAGCAGAGAAAAAGCTGACAAATTGAACGCAGAACTGAAGAAGGCGACCGGACGAGGTCATGAAAACTCAAGATCCTCTGCATCAGTGGAGCACGCGTACAGCGCCACCCCCCGCTCCCCCGGGGCGCGGCTCCCCCCCGCAGCCCTGCAGAAGCTGGAGGAGCTGATGCTGCAGGGGGACCTGCTGGAGGTGGTGTTAGAGGAGCAACAGCAAGTCTGGGAGGCGGTCAGCCTAGCTCGGGGCGCGGGGGGGCGGCGGGGGGCGCGGGTGTTGGACGCGGGGCGACGCAAGCGGCCCCGCGCGCCCCCGCCCCGACACGCGGCCAAGCGGACCCGGGGGCCTACCGCAGCTggtccatcatcatcatccgcagccgcCTCAACGTCGTCGACGAAACCACCGACATCCTCCAAGCGTGGCGGGGCCACCACCACCAACTATCTCAATAGGAAACAGGGTTTGTCATCAGCATCCGGTCTGATGATGCGGAAGCACTACATGGCTCGCCAGGAGAGGAGGAAACGAGGTGTCTCCACCAGACACCGAGGGTCTACCCGAGGCGGCGCCGGTACATCATCAGCTCGCGCGGCGCAAGACAGCAGCACGTCTTCCATGTCCTCGGGCGAAGACGAAGATGACTGCGCAGCTGTTAACTGTCTTCGGCCAACTGGCAAGGAAGTAGACTGGGTGCAATGCGACGGCGGCTGTAACGAGTGGTTCCACATGCATTGCGTCGGCGTCATCAAGGGCACACTCGGAGAAAACGATGACTACGTCTGCGGCTCCTGCGCCAAGGATAACAAGCATTGA
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKVVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAIGDNKETKIEVKREQTPEAGRARSASKCTAATPPPPASPARRYKSEPEPAAEGSHTEGALPPNNDKGMKTPVKEESPETNRRSPRENKWMSGTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPPGAPDAGAVISPHDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEAVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHAERKLRKNILHWGVTEAEREAFELLPDDSRQCVSCKTTCFLSCVTCSCTPHVACLRHAAELCACAPAAHRLRYRYTLDELPAMLEKLKKKSQQFHEWAEGVQNALDPDTPKTCDLDGLRAHLQRASELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFEMRSTELLNKDLEKIDTAYVREMEETVELGGRLCIVLPQLEALSVRLAQARWLEDSQHHRDNCNSLTPAVLTQLLAKAEDLLPHVAIEKERAVLYKLQAEVEEWEQKAQAVLIDTSKPIDDDDTQYSTITELTQLLAEGSDIEAALPSYHTLQTAITHAKDWLNKVEEMQSKDLYPYMHSVETLVKKSQSLPLALLEKQQLASALQSARDWQRGAAEMFLKKSTPDKKNYPHTLLEALSPRTTPSGGRRRTQPSLETTLFLDKFNEESTPTEIVAAFKQAETRELQAIKELRARNMRKDVRAPPATSVTFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPGSDSKFLCPDCVRTKRPRLDRILALLKVPRPRGFPRQRLQVPVPRLREDQAAPPRQDPGSAREYCTHRKSPDREGFPGSDSKFLCPDCVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDQARAMLSQPHQLHSHQASREKADKLNAELKKATGRGHENSRSSASVEHAYSATPRSPGARLPPAALQKLEELMLQGDLLEVVLEEQQQVWEAVSLARGAGGRRGARVLDAGRRKRPRAPPPRHAAKRTRGPTAAGPSSSSAAASTSSTKPPTSSKRGGATTTNYLNRKQGLSSASGLMMRKHYMARQERRKRGVSTRHRGSTRGGAGTSSARAAQDSSTSSMSSGEDEDDCAAVNCLRPTGKEVDWVQCDGGCNEWFHMHCVGVIKGTLGENDDYVCGSCAKDNKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
iTF_01528978;
80% Identity
-