Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963582015.1
Location
OY757054.1:423942-457710[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-24 4.3e-21 75.7 0.0 2 89 101 184 100 184 0.93
2 2 4.3 1.2e+04 -2.6 0.0 45 68 1286 1310 1274 1326 0.66

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACTAATGTGGAAGTTAATATGGGGGACTCGGCGTCCCCCATGAAGCCGGATAACTTCACGTTCACGCCGCCGCCAGAGGCCCCGGTGTTCGAGCCCACGGCCGAGGAGTTCCTGGACCCCTTGGCGTACATCAGCAAGATACGGCCCATCGCCGAGAAGTCGGGCATATGCAAGATAAAACCTCCTGCGCACTGGCAGCCACCGTTTGCCGTGGACGTAGACCGTCTGCGGTTCACGCCCAGGATCCAGAGGCTGAATGAGTTGGAGGCCATAACCCGAGTGAAGCTAAACTTCCTCGACCAGATCATAAAGTTCTGGGAGCTGCAGGGCTCCATGCTGAAGATCCCCACGGTGGAGCGCAAGCCACTCGACCTGTACGCACTGCACAAAGTCGTGAAGGATGCTGGTGGTTTCGAGGTGTGCTCGGCGGAGCGCAAGTGGTCTAAGATCGCGCGTCGCATGGGCCATCCCCAGGGGAAGGGCATTGGGTCCATCCTGAAGAATCATTATGAGAGGATCCTGTATCCTTATGATGTGTTCAAGAACAATGGAGCTGTTGGAGACAATAAGGAGACTAAGATAGAAGTGAAACGCGAACAAACCCCGGAGACCGCGCGCGCCCGCTCGGCGTCGAAATGCCCCGCGGCcacccccccgccccccgcctccCCCGCGCGACGCTACAAGGCAGAGCCGGAGCCGGCGGCTGAAGGGAGTCACACAGAAGGTGCTTTACCCCCCAATAATGACAAGGGGATGAAGACACCGGTTAAGGAAGAGAGCCCGGAGACCAATAGACGAAGTCCCCGCGAGAACAAGTGGATGTCCGGCACCGGCAGCTGCGGCTCCCGCGGTCGCGTGACGCGCTCGACCCGTCTCCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTGACGCCCGCGCCCCCGCCCGGCGCGCCCGTCGCGCACGTCACCAGCGCGCACGACCCCTTGGCGAAGTACATGTGCCACGTCTGCGGCCGCGGTGACGTGGAAGAACAGATGTTGCTGTGTGATGGCTGCGATGACTCCTACCATACCTTCTGCCTTCTGCCGCCGTTGGCAGACGTGCCCAAAGGCGACTGGCGCTGCCCCGTCTGCCTAGCTGAAGCGGTTTCAAAACCAACAGAGGCTTTCGGTTTCGAGCAGGCGTCGCGGGAGTACACGCTACAACAGTTCGGAGAAATGGCGGATCAGTTTAAATCAGACTACTTCAACATGCCCGTACATatGGTGCCGACGTCGACAGTGGAGCGGGAGTTCTGGCGCGTCGTGTCGTCCATAGACGAGGATGTCACTGTCGAGTACGGGGCTGACCTACACTCTATGGATCACGGATCTGGTTTCCCGACCAAGTCCAGCGCTCCCCTGTACCCCGGTGAACAGCAATATGCAGAGTCCAGCTGGAACCTCAACAACCTGCCCGTTCTAGAAGGTTCTGTGCTGGGACACATCAACGCTGATATATCGGGCATGaagATTCCATGGCTGTACGTGGGCATGTGTTTCGCGACTTTCTGCTGGCACAATGAGGACCACTGGAGCTATTCCATCAACTACCTCCATTGGGGAGAGCCTAAGACATGGTATGGAGTGCCAAGTTCCAAGGCGGAGCAGTTCGAGGCCGCCATGAAGGCGGAGGCTCCCGAGCTGTTCCAGCTGCAGCCCGACCTGCTGCATCAGCTCGTCACCATCATGAACCCTAATGTGCTCATGAAGGCAGGGGTTCCTGTATACAGATTGGACCAGCATGCTGGTGAGTTCGTGATAACATTCCCCCGCGCCTACCACGCAGGCTTCAACCAGGGATACAACTTCGCTGAGGCAGTCAACTTCACGCCCGCCGACTGGTTGAAGATGGGCAGAGAATGCGTGCTCCACTACTCCACTCTCCGACGCTACTGCGTGTTCTCGCACGACGAGCTGGTCTGCAAGATGGCGCTGGAGGCGGACTCGCTGAGCCTGACCGTGGCCCTGGCGGCGTACCGGGACATGCGGACCATGCTGCATACGGAGAGGAAGCTGAGGAAGAGCATCCTGCACTGGGGTGTGACGGAGGCGGAGCGCGAGGCCTTCGAGCTCCTCCCGGACGACTCCCGGCAGTGCGTGTCGTGCAAGACCACGTGCTTCCTGTCGTGCGTGACGTGCGCCTGCACGCCGCACGTCGCCTGTCTGCGGCACGCCGCCGCGCTCTGCGCCTGCGCACCCGGGAACCATCGCCTAAGATACCGCTACACCCTGGACGAGCTGCCGGCCATGCTGGAGAAGCTGAAGAAGAAGTCGGAGCAGTTCCGCGAGTGGGCGGAGGGCGTGCAGAACGCGCTCGACCCCGACACGCCCAAGACCTGCGACCTGGAGGGGCTGCGGGCGCATCTCCAGCGAGCCACTGAACTCAAGATGCAAAAAACCGAGCTAGTCCGCGCCCTAGAGACCGCCATAGAAGACGCGGAGAAGTGCGCCTCCGTCATCCAGCAGCTGGACCTCAACAAGATGCGCACGCGCACGCGACACCACGACCCCAAGTACAGGCTGTCTATACACGAGCTCACGCTCTTCGCCGCAGAGATAGATAGTCTAGCTTGTGTTTTACCTGAAGGATCGGCCGTCAAAGAAGTACTCCGTCAGACGTCAGAGTTCGAGACGCGATCCACTGAGCTACTCAACAAGGACTTGGAGCAAATAGATACAGCATACGTGAGGGATTTAGAAGAGACGGTAGAGCTAGGCGGTCGCCTCTGCATAGTCCTTCCCCAGCTGGAAGCGCTAACAGTGCGCCTCGCGCAAGCTCGCTGGCTGGAGGATTCGCAGCATCACAGAGATAACTGCAACTCCCTGACTCCACCTGTTCTCACACAACTCCTGGCGAAAGCAGAGGATCTCTTACCACATGTGGCTATTGAGAAGGAACGGGCTATACTCTACAAGCTGCAAGCGGAAGTAGAAGAATGGGAGAAGAAAGCGCAATCAGTCCTCATCGACACCAGCAAACCTCTCGACGAAGACGACCCTCAGTACAGCACGATAGCGGAGCTGACGCAGCTGCTGGCCGAGGGGTCGGACATCGAGGCCGCATTGCCTTCCTACCACACGCTACAAGCCGCCATCACTCATGCCAAGGATTGGCTGAATAAGGTGGAAGAGATGCAGTCCAAAGATCTATACCCCTACATGCACAGTGTAGAAGCGTTGGTGAAGAAGAGTCAGACGTTGCCGCTAGCATTGTTGGAGAAGCAGCAACTGGCCAGCGCTTTGCAATCAGCGAGGGACTGGCAGCGCGGCGCCGCTGAGATGTTTCTCAAGAAGACTACACCAGATAAGAAGAACTACCCCCACACACTGCTAGAAGCCCTCTCCCCCCGCACCACCCCCTCGGGCAACCGTCGTCGAACACAACCCTCGCTAGAGACTACCCTCTTCTTGGACAAGTTCAATGAGGAGTCCACACCTACGGAGATAGTAGCGGCTTTCAAGCAAGCTGAGACACGCGAGCTGCAAGCTATAAAGGAGCTTAGAACTCGTAATATGCGCAAAGACGTGCGCGCGCCGCCCGCTACTACGATCACATTCTGCATTTGCCAGAAACGGCAGTACGGCGTCATGACGCAATGCGAACTCTGCAAGGATTGGTTCCATGCATCGTGCATCGCGAACGCGCGCGACGACCGCGAGGAGTCACCAGACCGCGATGGTTTCCCATCCAGCGAGTCCAAGTTCCTCTGCCCGGACTGCGTCAGGACCAAGCGACCACGGCTCGACAGGATCCTGGCTCTGCTCgtCTGGCTACAGAAGCTGCCTGTCCGCCTGGCGGAGGGCGAAGCCCTACAGTGTGTGACGGAGCGCGCCATGGCGTGGCAGGACCAGGCCCGCGCTATGCTGGCGCAGCCCCATCACATGCATCCGCATCAGGCAAGCAGAGAAAAAGCCGACAAATTAAACGCAGAGCTAAAGAAAGCGACTGGAAGAGGTCATGAAAACTCAAGATCGTCAGCATCCGTGGAGCACGCGTACAGCGCGACGCCCcgggcgggcggcgcgcgccTGTCCCCCGCCGCCCTGCACAAGCTGGAGGACCTCATGCTGGAGGGGGATCTACTCGAGGTGGTGCTTGAAGAGCAGCAGCAAGTGTGGGACGCGGTGAGCCTGGCGCGGGGCGCGGCCGGCCGGCGCGGCGCCCGGGTCCTGGACGCCGGCCGCCGCAAGAGGCCGCGCGCGCCCCCGCCGCGCTCCGCCAAGCGGACACGGAACCATCATCCAGgtgaggggggaggggggggggactGTAACACCTGCGATGGACAGGGAACCGCTGCTGTCGCCAAGGGACTGGAATCCATCAtgcaagtgttaagggaaggGGGAGGGGGGACTGTAACACCTGCGATGGACAGGGAACCGCTGCTGTCGCCAAGGGACTGGAATCCATCATGCAAGTGTTaa
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSMLKIPTVERKPLDLYALHKVVKDAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKNNGAVGDNKETKIEVKREQTPETARARSASKCPAATPPPPASPARRYKAEPEPAAEGSHTEGALPPNNDKGMKTPVKEESPETNRRSPRENKWMSGTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPPGAPVAHVTSAHDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEAVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAPLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRLDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHTERKLRKSILHWGVTEAEREAFELLPDDSRQCVSCKTTCFLSCVTCACTPHVACLRHAAALCACAPGNHRLRYRYTLDELPAMLEKLKKKSEQFREWAEGVQNALDPDTPKTCDLEGLRAHLQRATELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFETRSTELLNKDLEQIDTAYVRDLEETVELGGRLCIVLPQLEALTVRLAQARWLEDSQHHRDNCNSLTPPVLTQLLAKAEDLLPHVAIEKERAILYKLQAEVEEWEKKAQSVLIDTSKPLDEDDPQYSTIAELTQLLAEGSDIEAALPSYHTLQAAITHAKDWLNKVEEMQSKDLYPYMHSVEALVKKSQTLPLALLEKQQLASALQSARDWQRGAAEMFLKKTTPDKKNYPHTLLEALSPRTTPSGNRRRTQPSLETTLFLDKFNEESTPTEIVAAFKQAETRELQAIKELRTRNMRKDVRAPPATTITFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDRDGFPSSESKFLCPDCVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDQARAMLAQPHHMHPHQASREKADKLNAELKKATGRGHENSRSSASVEHAYSATPRAGGARLSPAALHKLEDLMLEGDLLEVVLEEQQQVWDAVSLARGAAGRRGARVLDAGRRKRPRAPPPRSAKRTRNHHPGEGGGGGDCNTCDGQGTAAVAKGLESIMQVLREGGGGTVTPAMDREPLLSPRDWNPSCKC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
iTF_01528978;
80% Identity
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