Basic Information

Gene Symbol
ZFY
Assembly
GCA_963853775.1
Location
OY970814.1:2852000-2869039[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.14 20 7.5 0.7 1 23 95 117 95 117 0.97
2 12 0.26 37 6.6 4.1 1 23 124 146 124 146 0.97
3 12 0.84 1.2e+02 5.0 1.1 1 15 150 164 150 173 0.82
4 12 5.3e-06 0.00075 21.4 3.6 1 23 178 200 178 201 0.95
5 12 0.0019 0.26 13.4 0.9 2 23 208 229 207 229 0.97
6 12 1.2e-05 0.0017 20.2 0.7 2 23 243 264 242 264 0.97
7 12 1.4 2e+02 4.3 4.7 3 23 270 291 268 291 0.95
8 12 4.1e-05 0.0058 18.6 3.6 2 23 302 324 301 324 0.97
9 12 0.12 16 7.7 0.8 1 23 331 354 331 354 0.93
10 12 0.0039 0.55 12.4 0.4 5 23 366 385 364 385 0.93
11 12 4.4e-05 0.0062 18.5 4.7 1 23 394 416 394 416 0.98
12 12 0.00077 0.11 14.6 0.4 1 23 421 444 421 444 0.97

Sequence Information

Coding Sequence
ATGGAAAAAGAAACTAAAGATCTGAAATCAAAATTGCCGCTAAAGAAGAGATTCGAGAAGAGAGTCAAACCAGAAGATGACGACTTCTCGAGGAAAGAAAAACCGGAAGAAAACAATGTCACCGAAGAAAATGAACAGCAAGTGGATAATTCTCAACCTAAGACGGAAACCCCCTTGATGTACTCCTACGAAACATTAAGGAACATAGAAATTGTGACCATCAACGAAGAAGAACGTCAGCAAGAGTACCAAGAGACGTTGAAGTCGCGTCAACACATGCGTCATGTGTGTGTGCACTGTGCGCTCGGATTCGTACTCAAACAGGCGTTTGATGTGCATATGAAGGTTCATTCTCCCCAATCAGGCGACCACGAGTGCTTACTCTGTCACTCCCGTCTCAAAACCGCTGACATGTTATACCGGCACCGCTTACGGCATTACCGCCGTTACCGGTGCCTGCTTTGCCGGATGCGGTTTAAAGATAAAGACACTGCCGCCTGTCATGTCATGAACGATCATGCCGGACAGACCTTCGAATGCGAACATTGTGGGAGAGGATTCAAACGACCGCAGTACCTGAAGAGGCacgtggaacagcaccacaccAAGCCCCATCATCTTGAATGTGGCGTCTGCTTCCGAGTCTTCCACGAGAGGGGCTGGTATAGGTCTCATATCAGgacACATAACGAAGAGGTACGAGCCAAGACGGTGCGCCTACCAGTCACCTGCGAGATCTGTTCTCGCGACTACAAAAACAAAGCAAGCCTGAAGCGTCACCTTCTCACTCACGACGAGAATGTCCACTGCGAGATCTGTTACGAGAAGTGCAAGAATCGGATAACGTTGGGACATCACTACTTGAAGGTGCATAATGAGAAATATGTTGGAGCGCCGGAACAGACTTGCCCGCATTGCGACCGGATCTGTGCGACAAGAGCGATGCTAAAGAGACACATGCAAAGGATGCACAGCGATAGAACTAAGAAATACCAATGCGATCACTGCCAACGCCTCTACCTGACTAAAGGTGAGGTCCGGGCCCACATCACCTGGTCGCACATGCCGGCTGAAGCCCGAGGGGGGCACGCTTGCACCTGTGGTCGTATCTTCAGGAGCCCCTCGCTACTTCGCGACCATAAGGCCAGGTTCCATGCGTCACAGCCACCACCAAGGGTTCACCAGTGTGAACACTGTGATAAGGCTTTTGCGAACAAACAAGTGCTGAATCGTCACAAGAAAAGCCACTCCGACGAGATGTATCCCTGCAAAGAATGTGGATTACTCTTCAAAACTCAACCTTACGTCAAAGTCCACTACCAAATCAAACACCTAAACATGACGAGAGCACAAATCAAAGCACAGAGGAAACTCAACAAGGAACAAATAATACAGAATAATATACACAGAAGTACGAATTGGGAACCACCCATCTCTGACAAGAAGAAAAGTTCAGTTGATATTGAAAACGAAGAAGACCCGCTTCTGGTTCAGGAGGGGGAGATACAAATGAAATCGGAGAATGAAGATGACCTTCACTCTTTGGTTCAGGAGGGCGAAATACAAATCAAATTGGAGAGGGTAGATGACCTTCAAATCCCGACGTTCCAAACCTTTGTTGATATTAGTAGGGAATAG
Protein Sequence
MEKETKDLKSKLPLKKRFEKRVKPEDDDFSRKEKPEENNVTEENEQQVDNSQPKTETPLMYSYETLRNIEIVTINEEERQQEYQETLKSRQHMRHVCVHCALGFVLKQAFDVHMKVHSPQSGDHECLLCHSRLKTADMLYRHRLRHYRRYRCLLCRMRFKDKDTAACHVMNDHAGQTFECEHCGRGFKRPQYLKRHVEQHHTKPHHLECGVCFRVFHERGWYRSHIRTHNEEVRAKTVRLPVTCEICSRDYKNKASLKRHLLTHDENVHCEICYEKCKNRITLGHHYLKVHNEKYVGAPEQTCPHCDRICATRAMLKRHMQRMHSDRTKKYQCDHCQRLYLTKGEVRAHITWSHMPAEARGGHACTCGRIFRSPSLLRDHKARFHASQPPPRVHQCEHCDKAFANKQVLNRHKKSHSDEMYPCKECGLLFKTQPYVKVHYQIKHLNMTRAQIKAQRKLNKEQIIQNNIHRSTNWEPPISDKKKSSVDIENEEDPLLVQEGEIQMKSENEDDLHSLVQEGEIQIKLERVDDLQIPTFQTFVDISRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01441398;
90% Identity
iTF_00449573;
80% Identity
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