Xtog048490.1
Basic Information
- Insect
- Xanthia togata
- Gene Symbol
- clz9
- Assembly
- GCA_963853775.1
- Location
- OY970817.1:1319175-1323930[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-11 2.8e-08 34.9 0.0 1 40 25 64 25 67 0.95
Sequence Information
- Coding Sequence
- ATGGTTCGAAAATATACAAGAACATTTAGAAACTTGAGAAATGGTAAACGTTTCATGCCGTACATCTCCTATACTCATGATGATTTGAACAAGGCATTATCAGACGTCAAATCTAAAAAACTGTCTACCAGAGAAGCGGAACACAAATATGGCGTCCCCAAAAGTACAATTAACCGtcatttaaaagataaaaacttACTTTATTCAAGACCAGGGCACCCTACATTATTTTCAGAGGTGGAAGAAAAAACATTCGTCGATTATGTTAAGCATATGGGAGAATGGGGATTTCCCTTAGATCTAATGGATTTGAGAGTCTTCGcccaaaaatatttacaaaaaataggaaGGACTGTCTATAATTTGAAAGACAATTTACCGGGACGGGATTGGGCGGCTTGTTTTTTACAGAGGCATAAAGCACAGATTTCTAACAGATGTGCTGCAAATATATCCTCGGACAGAGCAACCTTAAGCTCAGAGGTGCTTGACGCATTCTTTGACCATTATGAACAAAATTTGGAACATGTCACACCGGACTGTGTAATAAATTACGACGAGACTAACCTGACAGACGACCCTGGATCCAAAAAGTACATTTTTAAGCGAGGAAAAAAGTACCCTGAGAGGATTATTAACAATTCTAAATCGTCTGTAAGTCTGATGTTTTCTGGCACAGCATCAGGACTACTTTTACCAGTATATGTTGTATATAAAGCAGAGCACTTGTACGACACGTGGCTCTTAGGAGGCCCAGAACACACAAGATACAATAAATCCAAAAGCGGATGGTTTGATTCGCTATGTTTTGAGAATTGGTTCCAGACGATCATCATTCCATATGTAAAAACGAAGGAGGGAAAAAAGGTTGTGCTTATAGGAGATAATCTATCGTCTCATTTCTCATCTAAAGTATTGGAAGATtgtgaaaaattcaatataacTTTTGTGTGCTTACCACCAAAGGCCACACACATTCTGCAGCCCCTTGATGTCGCTTTTTTCGCTCCTTTGAAACATTATTGGCGAATTATTTTGACAAATTGGAAAAAAGGCGAAGGCCGGAAATGCAAAACGCTTGCTAAAAATAGCTTTCCTGGCCtattaagtgaattattaaaaatgctGCATGCAGAAGATGCTGCTTCACAAAATCTCAAGTCTGGTTTTGCCAAATGCGGCCTGCTGCCTGTCGACAGAAATAGACCGAAAGAAAGACTTCCTGGGCAAATATCGGATTTGGACATACTACAAAACAGGGCTTCTAGTGTTATTATAGAGATGTTAGGAGAAATAAGGGGTTGTACCGGTGAAACAAAAAGTACCAGGAAGAAACGCTGCAATGTTCCTGCCGGCCAAAGCATAACATTAGCTGATTTAAACACTGAAGAACGGAGCAACAAAGAGAAGGGTAAAggaaaaggaaaaggaaaaaaaacacgACCTGTGACACCAACATCCACTATTTTACCGATAATAGAAAATTTAACTCAGCCATCCAGTGAAAAACAAGaccaaaaaaaattgagcaaCAAAGGGAATGGTAAGGGCAAAGAAAATCAAACACCAACAGCAACAGAAAAAGTTCTTGAAGTttcaacaatgaaaaaaaatactcagcCATGTGAAAATGTGACGACGGAACATACAActcctaaaaaaaatactgaaagaaaaaaatggcGACTACATAGTGAAACCTCTTCCTCGGATAGTGACATTGAAATAAGTGTTCACAGTGACTCGGACATTTTAAATGTTAGTGATGATGACGAAATGGGAAAGTCGCCATTTCGTCAAGAGGTCCTGTCTCCAGAATCAGTATCAGCAACCCTGACGTTAAAAGAGGCTGTAAACAGTCCAAGTCCAGTCCCAGGTCCAAGTCGGGAAACGGTCGTGGTTGACTGTGTACCGGTAGTATATGATGTAGGTGACTCCGTTTTGATGAACGCTCATCGGTATTACGTGTGCTTGACCGAGTTGGAATGTCTATGGGAAGATTTTTGTAGTAATGGTGGTAAATTGGCGGAATGTATGGTAGAAGATCAAGCATATGTTTAA
- Protein Sequence
- MVRKYTRTFRNLRNGKRFMPYISYTHDDLNKALSDVKSKKLSTREAEHKYGVPKSTINRHLKDKNLLYSRPGHPTLFSEVEEKTFVDYVKHMGEWGFPLDLMDLRVFAQKYLQKIGRTVYNLKDNLPGRDWAACFLQRHKAQISNRCAANISSDRATLSSEVLDAFFDHYEQNLEHVTPDCVINYDETNLTDDPGSKKYIFKRGKKYPERIINNSKSSVSLMFSGTASGLLLPVYVVYKAEHLYDTWLLGGPEHTRYNKSKSGWFDSLCFENWFQTIIIPYVKTKEGKKVVLIGDNLSSHFSSKVLEDCEKFNITFVCLPPKATHILQPLDVAFFAPLKHYWRIILTNWKKGEGRKCKTLAKNSFPGLLSELLKMLHAEDAASQNLKSGFAKCGLLPVDRNRPKERLPGQISDLDILQNRASSVIIEMLGEIRGCTGETKSTRKKRCNVPAGQSITLADLNTEERSNKEKGKGKGKGKKTRPVTPTSTILPIIENLTQPSSEKQDQKKLSNKGNGKGKENQTPTATEKVLEVSTMKKNTQPCENVTTEHTTPKKNTERKKWRLHSETSSSDSDIEISVHSDSDILNVSDDDEMGKSPFRQEVLSPESVSATLTLKEAVNSPSPVPGPSRETVVVDCVPVVYDVGDSVLMNAHRYYVCLTELECLWEDFCSNGGKLAECMVEDQAYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01025974;
- 90% Identity
- iTF_01527006; iTF_00237414; iTF_01025970; iTF_01025972; iTF_01025974; iTF_01025977; iTF_01025971; iTF_00446043;
- 80% Identity
- -