Mimp011389.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- clz9
- Assembly
- GCA_905147345.1
- Location
- LR990341.1:16194305-16196503[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-11 1.9e-08 35.7 0.0 1 41 25 65 25 67 0.96
Sequence Information
- Coding Sequence
- ATGGTTCGAAAATATACAAGAACATTTAGAAACTTGAGAAATGGTAAACGTTTCATGCCGTACTTCTCCTATACTCGTGATGATTTGAACAAGGCATTATCAGACGTTAAATCTAAAAGACTGTCTACCAGAGAAGCGGATCAGAAATATGGCGTCCCCAAAAGTACAATCAACCGTCATTTAAAAGAGAAAAACTTATTGTATTCAAAACCAGGGCACCCTACATTATTTTCAGAGGTGGAAGAAAAAATATTCGTCGATTATATTAAACATATGGGAGAATGGGGATTCCCCTTAGATCTAATAGATTTGAGGGTCTTcgcccaaaaatatttacaaaaaataggaAGGACTGTCTATAATCTGAAAGACAATTTACCGGGACGGGATTGGATGGTTTGTTTTTTACAAAGGCATAAAGAACAGATTTCTAACAGATATGCTGCAAATATATCCTCGGACAGAGCAACCTTAAGCTCAGAAGTGCTTGACGCATTCTTTGACCATTACGAACAAAATTTGGAAGATGTCACACCTgattgtttaataaattatgaCGAGACTAACCTGACAGACGACCCTGGATCCAAAAAGTACATTTTTAAGCGAGGAAAAAAGTACCCTGAGAGGATCATTAACAATTCTAAATCGTCTGTGAGTCTGATGTTTTCTGGCACAGCATCAGGACTACTTTTACCAGTATATGTTGTATACAAAGCAGAGCACTTGTACGACACGTGGGTCTTAGGAGGCCCAGAACACACAAGATACAATAAATCCAAAAGCGGATGGTTTGATTCGCTATGTTTTGAGAATTGGTTCCAGACGATCATCATTCCATATGTAAAAACGAAAGAGGGAAAAAAGGTTGTGCTTATAGGAGATAATCTATCGTCACATTTCTCGTCTAAAGTATTGGAAGATtgtgaaaaattcaatataacTTTTGTGTGCTTACCACCAAAGACCACACACATTCTGCAGCCTCTTGATGTTGCCTTTTTCGCTCCTTTGAAACATTATTGGCGAATTATTTTGACAAATTGGAAAAAAGGCGATGGCCGGAAATGCAAAACTCTTGCTAAAAATAGCTTTCCTAGCCTTTTAagtgaattattaaaaatgctGCATGCAGAAGATACCGCTTCACAAAATCTCAAGTCTGGTTTTGCCAAATGTGGTCTGCTGCCTGTTGACAGAAATAGACCGAAAGAAAGACTTCCTGGGCAAATATCGGATGTGGATATAATACAAAACAGGGCTTCTGGTGTTATTATAGAGATGTTAGAAGAAATAAGGGGTTGTACTGGTGAAACAAAAAGTACGAGGAAGAAACGCTGCAATGTTCCTGCCGGCCAAAGCATAACATTAGCTGATTTAAACACTGAAGAACGGAGCAACAAAGAGAAGGGAAAGGGTAAAGGAAAAGGGAAAAAAACACGACCTGTGACACCTACATCGACTATTTTACCGATAATAGAAAATTTTACTGGGCTATCCTGTGAGGTACAAGACCAACAAAAATTGAGCAACAAAGGGAAAGGTAAgggcaaagaaaataaaaaaccatcAGCAACAGAAAAAGTTCTTAAAGTTTCAACAATGAATAAAAATACTCAGCCATGTGAAAATGCATCGACGGAACATACAACTCCTAAAAAAaattctgaaagaaaaaaatggcgaCTACGTAGTGAAACCTCTTCCTCGGATAGTGACATTGAAATAAGCGTTCACAGTGACTCAGACATCTTACAAGTTAGTGAAGATGACGAAATTGGGACTTATCGAAACCTTGAAGAATTCCAAGATTTTGATAAGACCCCATTTCGTCACGAGGTCCTGTGTCCAGAATCAGTACCAGCAAATCGGACGTTAAAAGAGGCTGTACACAGTCCAAGTCCAGTCCCAGGACCAAGTAGGGAAACGGACGTGGTTGATTGTATACCAGTTGTTTATAATGTTGGTGACTCCGTCTTGGTgagatatattttaaaaaaaaaggtgcaaTATTTTGTTGGACATATTTTAAGCAAATCTGGCGACAAGCAATTCACCAtttcttttctaaaaaaaactggaagGAGTGATAGTAATGATGACATGATTGTGAAGCCGATTGAGCTGTTGGCGCTGAATGAGAAGGAAACTGAATTCGTCTTTATGAATGacgaagatatatttttttttgaatattga
- Protein Sequence
- MVRKYTRTFRNLRNGKRFMPYFSYTRDDLNKALSDVKSKRLSTREADQKYGVPKSTINRHLKEKNLLYSKPGHPTLFSEVEEKIFVDYIKHMGEWGFPLDLIDLRVFAQKYLQKIGRTVYNLKDNLPGRDWMVCFLQRHKEQISNRYAANISSDRATLSSEVLDAFFDHYEQNLEDVTPDCLINYDETNLTDDPGSKKYIFKRGKKYPERIINNSKSSVSLMFSGTASGLLLPVYVVYKAEHLYDTWVLGGPEHTRYNKSKSGWFDSLCFENWFQTIIIPYVKTKEGKKVVLIGDNLSSHFSSKVLEDCEKFNITFVCLPPKTTHILQPLDVAFFAPLKHYWRIILTNWKKGDGRKCKTLAKNSFPSLLSELLKMLHAEDTASQNLKSGFAKCGLLPVDRNRPKERLPGQISDVDIIQNRASGVIIEMLEEIRGCTGETKSTRKKRCNVPAGQSITLADLNTEERSNKEKGKGKGKGKKTRPVTPTSTILPIIENFTGLSCEVQDQQKLSNKGKGKGKENKKPSATEKVLKVSTMNKNTQPCENASTEHTTPKKNSERKKWRLRSETSSSDSDIEISVHSDSDILQVSEDDEIGTYRNLEEFQDFDKTPFRHEVLCPESVPANRTLKEAVHSPSPVPGPSRETDVVDCIPVVYNVGDSVLVRYILKKKVQYFVGHILSKSGDKQFTISFLKKTGRSDSNDDMIVKPIELLALNEKETEFVFMNDEDIFFFEY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01025970; iTF_01025972; iTF_01025977; iTF_00446043; iTF_00237414; iTF_00237473; iTF_01527006; iTF_01527008; iTF_01025971;
- 90% Identity
- iTF_01527008;
- 80% Identity
- -