Basic Information

Insect: Diarsia dahlii
Gene Symbol: clz9
Assembly: GCA_949775195.1
Location: OX459204.1:2186638-2189777[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.2e-11 1.9e-08 35.3 0.0 1 41 25 65 25 70 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.2e-11	1.9e-08	35.3	0.0	1	41	25	65	25	70	0.95

Sequence Information

Coding Sequence: ATGGTTCGAAAATATACAAGAACATTTAGAAACTTGAGAAATGGCAAACGTTTCATGCCGTACTTCTCCTATACTCGTGATGATTTGAACAAGGCATTATCAGATGTTAAATCTAAAAGACTGTCTATCAGAGAAGCAGAGGGGAAATACGGCGTCCCCAAAAGTACAATTAACCGTCATTTAAAAGAGAAAAACTTAATGTATTCAAGACCAGGGCACCCTACATTATTTTCAGAGGTGGAAGAAAAAACATTCGTCGATTATATTAAACATATGGGAGAATGGGGGTTCCCCTTAGATCTAATGGATTTAAGAGTCTTCGcccaaaaatatttgcaaaaaatagGAAGGACTGTGTATAATTTAAAAGACAATTTACCGGGACGGGATTGGGCGGCTTGTTTTTTGCAGAGGCATAAAGAAAAGATTTCTAACAGATATGCTGCAAACATATCATCGGACAGAGCATCCTTAAGCTCAGAGGTGCTTGATGCATTCTTTGACCATTATGAACAAAATTTGGAAGATGTCACACCTgattgtttaataaattacgacGAGACTAACCTGACTGACGACCCTGGATCCAAAAAGTACATATTTAAGCGAGGAAAAAAGTACCCAGAGAGGATCATTAACAATTCTAAATCGTCTGTGAGTCTGATGTTTTCTGGCACAGCATCAGGGCTACTTTTGCCAGTATATGTCGTATATAAAGCAGAGCACTTGTACGATACGTGGGTCTTAGGAGGCCCAGAACACACAAGATACAATAAATCCAAAAGCGGTTGGTTTGACTCGCTATGTTTCGAGAATTGGTTCCAAACGATCATCATTCCATATGTAAAAACGAAAGAGGGAAAAAAGGTTGTGCTCATAGGAGATAATCTGTCGTCACATTTCTCGTCTAAAGTATTGGAAGATTgtgaaaaatttaatataacttttgtgtgCTTACCACCAAAGGCCACACACATTCTGCAGCCTCTTGATGTTGCTTTTTTTGCTCCTTTGAAACATTATTGGCGAATTATTTTGACAAATTGGAAAAAAGGCGACGGCCGGAAATGCAAAACGCTTGCTAAAAATAGCTTTCCTAGCCTTTTAAgtgaattattaaaaatgctgCATGCAGAAGATGCTGCTTCACAAAATCTCAAGTCTGGTTTTGCCAAATGCGGTCTGCTGCCTGTTGACAGAAACAGACCGAAAGAAAGACTTCCTGGGCAAATATCGGATGTGGATATAGTGCAAAACAGGGCTTCTGGTGTTATTATAGAGATGTTAGAAGAAATAAGGGGTTGTACTAGTGAAACAAAAAGTACGAGGAAGAAACGTTGCAATGTTCCTGCCGGTCAAAGCATAACGTTAGCTGATTTAAACACTGAAGAACGGAGCAACAAACAGAAGGGTAAGGGTAaaggaaaaggaaaaaaaacacgACCTGTGATACCAACATCCACTATTTTACCGATGATAGAAAATTTAACTCGGTTATCCTGTGAAGTACAAGACCAACAAAAATTGAGCAACAAAGGGAAGACCAAGGGCAAAGAAAATCAAACACCATCAGCAACAAAAAATGTTCTTGAAACTTCAACaatgaataaaaatactcaGCCATGTGAAAATGTATCGACAGAACACACTCcaagaaaaaaatctgaaaaaaaaaggcGACTAGCTAGTGAAACCTCTTCCTCGGATAGTGAAATAGAATTAAGTGTTCACAGTGACTCAGACATCTTAAATGTTAGTGAAGGTGACGAAATGGGGACTCCATTCCGACAAGAGGTCCTGTGTCCAGAATCAGTAACAGCAACCCTGACGTTTAAAGAGGCTGTACACAGTCCAAGTCCAGTCCCAGGACCAAGTAGGGAAACGGACCTGGTTGACTGTGTACCGGTTGTTTATGATGTAGGCGACTCCGTTTTGAATCTTCTCAATGAAAGATGTGATGGCTGa
Protein Sequence: MVRKYTRTFRNLRNGKRFMPYFSYTRDDLNKALSDVKSKRLSIREAEGKYGVPKSTINRHLKEKNLMYSRPGHPTLFSEVEEKTFVDYIKHMGEWGFPLDLMDLRVFAQKYLQKIGRTVYNLKDNLPGRDWAACFLQRHKEKISNRYAANISSDRASLSSEVLDAFFDHYEQNLEDVTPDCLINYDETNLTDDPGSKKYIFKRGKKYPERIINNSKSSVSLMFSGTASGLLLPVYVVYKAEHLYDTWVLGGPEHTRYNKSKSGWFDSLCFENWFQTIIIPYVKTKEGKKVVLIGDNLSSHFSSKVLEDCEKFNITFVCLPPKATHILQPLDVAFFAPLKHYWRIILTNWKKGDGRKCKTLAKNSFPSLLSELLKMLHAEDAASQNLKSGFAKCGLLPVDRNRPKERLPGQISDVDIVQNRASGVIIEMLEEIRGCTSETKSTRKKRCNVPAGQSITLADLNTEERSNKQKGKGKGKGKKTRPVIPTSTILPMIENLTRLSCEVQDQQKLSNKGKTKGKENQTPSATKNVLETSTMNKNTQPCENVSTEHTPRKKSEKKRRLASETSSSDSEIELSVHSDSDILNVSEGDEMGTPFRQEVLCPESVTATLTFKEAVHSPSPVPGPSRETDLVDCVPVVYDVGDSVLNLLNERCDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01025974;
90% Identity: iTF_01527008;
80% Identity: -