Basic Information

Gene Symbol
ZFY
Assembly
GCA_949128155.2
Location
OX421955.2:2088657-2108379[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.15 16 7.4 0.7 1 23 122 144 122 144 0.97
2 12 0.27 29 6.6 4.1 1 23 151 173 151 173 0.97
3 12 0.76 82 5.1 1.5 1 15 177 191 177 200 0.82
4 12 5.5e-06 0.00059 21.3 3.6 1 23 205 227 205 228 0.95
5 12 0.0019 0.2 13.3 0.9 2 23 235 256 234 256 0.97
6 12 1.3e-05 0.0014 20.2 0.7 2 23 270 291 269 291 0.97
7 12 1.5 1.6e+02 4.2 4.7 3 23 297 318 295 318 0.95
8 12 4.2e-05 0.0045 18.5 3.6 2 23 329 351 328 351 0.97
9 12 0.12 13 7.7 0.8 1 23 358 381 358 381 0.93
10 12 0.004 0.43 12.3 0.4 5 23 393 412 391 412 0.93
11 12 4.6e-05 0.0049 18.4 4.7 1 23 421 443 421 443 0.98
12 12 0.00079 0.085 14.5 0.4 1 23 448 471 448 471 0.97

Sequence Information

Coding Sequence
ATGGAAAATACACGCAATCACCCATTACGACTCCTCCAAGTGGAAAAGTCGAAAAAAAATGCCATAAGGTTCCGAAAACCACTCAAAAAAGAAACTAAAAATCTGAAATCAAAATTGCCGCTAAAGAAGAGATTCGAGAAGCGAGTCAAACCAGAAGATGACGACTTCCCGAAGAAAGAAAAACCGGAAGAAAACAATGTCACTGAAGAAAATGAACAGCAAGTGGATAGTTCTCAACCTAAGACGGAAACCCCCTTGATGTACTCCTACGAAACATTAAGGAACATAGAAATTGTGACCATCAACGAAGAAGAACGTCAGCAAGAATACCAAGAGACGTTGAAATCGCGTCAACACATGCGTCATGTGTGTGTACACTGCGCGCTCGGATTCGTTCTCAAACAGGCGTTTGATGTGCATATGAAGGTTCATTCTCCCCAATCAGGCGACCACGAGTGCTTACTCTGTCACTCCCGTCTCAAAACCGCTGACATGTTATACCGGCACCGCTTACGGCATTACCGCCGATACCGGTGCCTGCTTTGCCGGACGCGGTTTAAAGATAAAGACACTGCCGCCTGCCACGTCATGAATGATCATGCCGGACAGACCTTCGAGTGCGAACATTGTGGAAGAGGATTCAAACGACCGCAGTACCTGAAGAGGCATGTAGAACAGCATCACACGAAGCCCCATCATCTTGAATGTGGCGTTTGCTTCCGAGTCTTCCACGAGAGGGGCTGGTATAGGTCTCATATCAGgacACATAACGAAGAGGTACGAGCCAAGACGGTACGCCTACCTGTCACCTGCGAGATCTGTTCCCGCGACTACAAGAACAAAGCAAGCCTGAAGCGTCACCTTCTCACACACGACGAGAATGTCCACTGCGAGATCTGTTACGAGAAGTGCAAGAATCGGATCACGTTGGGACATCACTACTTGAAGGTGCATAATGAGAAATATGTTGGtGCGCCGGAACAGACTTGCCCGCATTGCGACCGGATCTGCGCGACACGAGCGATGCTCAAGCGACACATGCAAAGGATGCACAGCGATAGAACTAAGAAATACCAATGCGATCACTGCCAACGCCTCTACCTGACGAAAGGTGAGGTCCGGGCCCACATCACCTGGTCGCACATGCCGGCTGAAGCCCGAGGGGGGCACGCTTGCACCTGTGGTCGCATCTTCAGGAGCCCCTCGCTACTTCGCGACCATAAGGCCAGGTTCCATGCGTCACAGCCACCACCAAGGGTTCACCAGTGTGAACACTGTGATAAGGCTTTTGCGAACAAACAAGTGCTGAATCGTCACAAGAAAAGCCACTCCGACGAGATGTATCCCTGCAAAGAATGTGGATTACTCTTCAAAACTCAACCCTACGTCAAAGTCCACTACCAAATCAAACACTTAAACATGACGAGAGCACAAATCAAAGCACAGAGGAAACTCAACAAGGAACAGTTAATACAGAATAATATACACAGAAGTACGAATTGGGAACCACCCATCTCTGACAAGAAGAAAAGTTCAGTTGATATTGAAAATGAAGAAGACCCGCTTCTGGTTCAGGAGGGGGAGATACAAATGAAATCGGAGAATGAAGATGACCTTCACATTTTGGTTCAGGAGGGCGACATACAAATCAAATTGGAGCAGGAAGATGACCTTCAAATTCCGACGTTCCAAACCTTTGTTGATATTAGTAGGGAATAA
Protein Sequence
MENTRNHPLRLLQVEKSKKNAIRFRKPLKKETKNLKSKLPLKKRFEKRVKPEDDDFPKKEKPEENNVTEENEQQVDSSQPKTETPLMYSYETLRNIEIVTINEEERQQEYQETLKSRQHMRHVCVHCALGFVLKQAFDVHMKVHSPQSGDHECLLCHSRLKTADMLYRHRLRHYRRYRCLLCRTRFKDKDTAACHVMNDHAGQTFECEHCGRGFKRPQYLKRHVEQHHTKPHHLECGVCFRVFHERGWYRSHIRTHNEEVRAKTVRLPVTCEICSRDYKNKASLKRHLLTHDENVHCEICYEKCKNRITLGHHYLKVHNEKYVGAPEQTCPHCDRICATRAMLKRHMQRMHSDRTKKYQCDHCQRLYLTKGEVRAHITWSHMPAEARGGHACTCGRIFRSPSLLRDHKARFHASQPPPRVHQCEHCDKAFANKQVLNRHKKSHSDEMYPCKECGLLFKTQPYVKVHYQIKHLNMTRAQIKAQRKLNKEQLIQNNIHRSTNWEPPISDKKKSSVDIENEEDPLLVQEGEIQMKSENEDDLHILVQEGDIQIKLEQEDDLQIPTFQTFVDISRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01441398;
90% Identity
iTF_00449573;
80% Identity
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