Xict024155.1
Basic Information
- Insect
- Xanthia icteritia
- Gene Symbol
- retn
- Assembly
- GCA_949128155.2
- Location
- OX421948.2:7947422-7959633[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4 1.5e+04 -2.4 0.0 32 51 17 36 12 55 0.73 2 3 2.5e-19 8.8e-16 59.2 0.0 17 89 99 169 92 169 0.93 3 3 6.1 2.1e+04 -2.9 0.0 25 38 297 310 259 314 0.59
Sequence Information
- Coding Sequence
- ATGATCCGGCGTAGTCGCATCGTCGTCTTTCAGCCGCATCCGACATTTCCATTGTTGCAATTTTATTGCCGGTGTTACCGTGCTGGCGGAGATCGTAAACTACGCACCAGCGCTCGATACTATCGGCGGCTCGGCCTGATGGCTGATGGGCCGCGCGACCGCACCGCGCCGCATTATCGCGCACCACCGCCACCGCAGCCGCGATTTTCATTCGTTTCTAATAAATTGATACGAGAGCTACGCGACGTGCCATTGGTCGACTCACTCCCCGGACTTCGATCCTCGGACCATGACCGCACTCCAATCAATCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTACGAGCTGTACAACCTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTCATCAATAAGAAGTTGTGGCAGGAAATCATCAAGGGACTGCGGTTGCCATCGTCCATCACGTCTGCTGCCTTCACGTTACGTACACAATACATGAAATACCTGTATGACTATGAGTGCGAGAAGAAGAACCTATCAACCAGGAGCGAGCTGGATGCAGCCATTGAAGGGAACAAGCGTGAGGGACGTCGCGCCTCTGGGCAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTGTCGCTGTCCCTGGGGGGCGTCGCGCCGCGTCTGCCACCGCTgccgccgcacgcgccgcatCTCGCACAGCACGACATCGAGTACAGGGTACGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCGCCCCCCAGCAATGGCCCAGCACCAATGATGTCACCTCGTGACGCAGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACTCTCTGGTCACTCtacaacaataacaacaacaacagcccACAACCGGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCAGTGACGAGCGGCGGCAAGCGCGAGGCGTGCCgctcgcccgcgccgcccgccaagcgccgcacgccgcgcccccCCTCGCGCCCCCCCTCGCGCCCGCCGTCGCCGCGCGCGCACGAGCCGCTGGAGCCGCCGCAGCACCGCCACAGCCGCAGGGATGCCACGTCACCGCCACAGATCAACGGCATGCCCAATTCCAACGGAGTCAATGGAGCTGCCTTCAAGATTACTACCAGAGGAGACGCGGGCACAGGTGACCAGCAACTGGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTATTTCCCTCAGGCAACGGTCAAAATGGACACAGACAAATGGTGtcttaa
- Protein Sequence
- MIRRSRIVVFQPHPTFPLLQFYCRCYRAGGDRKLRTSARYYRRLGLMADGPRDRTAPHYRAPPPPQPRFSFVSNKLIRELRDVPLVDSLPGLRSSDHDRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSVTSGGKREACRSPAPPAKRRTPRPPSRPPSRPPSPRAHEPLEPPQHRHSRRDATSPPQINGMPNSNGVNGAAFKITTRGDAGTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -