Wsmi011929.1
Basic Information
- Insect
- Wyeomyia smithii
- Gene Symbol
- grn
- Assembly
- GCA_029784165.1
- Location
- CM056644.1:143228258-143249903[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-19 2e-15 57.8 4.3 1 35 354 387 354 388 0.98 2 2 2.5e-19 1.7e-15 58.0 4.8 1 35 413 446 413 447 0.97
Sequence Information
- Coding Sequence
- ATGATGGATGCCTCGGCGATAGAGGCGCGCGGTTGGTATGACAACCGCCTAGCGGCGGAAAGTTCGCTCGGACCGACGGCAGCTGCAGCGGCGGCCGCTGCGGCCTCGCTCGGACAGCAGTCCGGTACCGGTGGCGTCGATACGTCCGATATGAATGCATTTTACCGGTTCGAGAACGGCGCTGCAGCAGCGGCAGCCCACCGGCGGTACTACCCCACCGGATACGGCAGCCATGCTTCTCGGATGTCCCCGCATATGGCCCCACAAGTATGTCGACCGCACTTTCCGAGTCCCCTGTCTTGGTTCAATGAATCGACCAAACCTTTTGCTGCCAGCGGAAGCTGGAGTAGTCCCTTTACTTGCCCCCAGGATCCGCAGGAGAGTAAACAAAACCAACTGCAAAGCAGCCAAACATCGGCGGGTCAACATTTGTTCTCATTTCCACCGACACCACCGAAGGACTCCACGCCGGATTCAGTACAGACGCCTACCGAGTACCAAACCACCCTAAACAGCTTTATGCACCATAGTCAGACGGCGGCAAATGGCCTGAATGCTAGTTCGAGctcaaacagcaacaataacaacaattcTAGCATCTCGACGCATTCGGCGGACAACTGCGGAATCGATGTGAAACCCTGCTTATCCGGGAATTCGCTTAGCGATCGGAATAACGCAGAGGTGGAGCATAATCACCCAAAGCATCGGGAAGGTACGGGTAACAACAATAGTAATAACAACAATAGTTCCGCATCCGCTACTAACAGTCACGGCGGAAGCAGTAGTGGTAACAGTACCGCCACCTACCAAAATTCCACCGTCAACAATTCGTTCAACATGTTCGATCAGACGCACCACAGTGGGATCGGGTACGATCACACCGGGTACGGATTCCACCAAACCGGACACAGCATCGGTGGCGGTGGTAGCGGTACTGGCGGTGGCGGAGGCGGAACAGGTGGAACATACCAGCAGAGCCCCCGACCGGGCCTCATGAACAGCTCACACATAAAGGCGCAGAGAGCAAAAGCGAAATCCAGTGCCGAGGGACGAGAATGCGTCAACTGTGGTGCCACCTCGACGCCCCTCTGGCGGCGAGATGCAACCGGCCACTATCTGTGCAATGCGTGCGGACTGTACTACAAAATGAACGGCCAAAACCGACCGCTAATCAAACCGAAACGAAAACCAGTTACCTCCCAGCAAAGTGCAGCCCGTCGGGCAGGAACATCATGTGCAAACTGCAAAACCACAACCACGTCGCTGTGGAGGAGGAACCAAAGCGGAGAACCAGTCTGCAACGCCTGTGGACTGTACTACAAGTTGCATAATGTGGATCGACCACTCACGATGAAAAAAGAAGGCATTCAAACAAGGAACCGCAAATTGACAGCTAAATCTAAAAAACGGAAATCAACACCTGGCTATAGTTTCTCCTTCGGAGATCTTATGAATCCTCTGGACCATAACAAATCCTTCCCGGGGGCATTCCCAACATCGATGGGACAACACGCTCATCTGTCCAGTGGGCTGCATCCCGCCCATTCGCACATGCACAGTGGATGGTACACGACAAGTCTCGGATCGCTTGGAACCTCCGGAAGCTTGCAAAATGGCTTTAGTAGTACAGCACCTCTTGGAACCGGAGCTGTAGCACACCCGCAATCGTACCATCTAGGATTGAACTctatgagtTGGCGATCGGAATACACGTGA
- Protein Sequence
- MMDASAIEARGWYDNRLAAESSLGPTAAAAAAAAASLGQQSGTGGVDTSDMNAFYRFENGAAAAAAHRRYYPTGYGSHASRMSPHMAPQVCRPHFPSPLSWFNESTKPFAASGSWSSPFTCPQDPQESKQNQLQSSQTSAGQHLFSFPPTPPKDSTPDSVQTPTEYQTTLNSFMHHSQTAANGLNASSSSNSNNNNNSSISTHSADNCGIDVKPCLSGNSLSDRNNAEVEHNHPKHREGTGNNNSNNNNSSASATNSHGGSSSGNSTATYQNSTVNNSFNMFDQTHHSGIGYDHTGYGFHQTGHSIGGGGSGTGGGGGGTGGTYQQSPRPGLMNSSHIKAQRAKAKSSAEGRECVNCGATSTPLWRRDATGHYLCNACGLYYKMNGQNRPLIKPKRKPVTSQQSAARRAGTSCANCKTTTTSLWRRNQSGEPVCNACGLYYKLHNVDRPLTMKKEGIQTRNRKLTAKSKKRKSTPGYSFSFGDLMNPLDHNKSFPGAFPTSMGQHAHLSSGLHPAHSHMHSGWYTTSLGSLGTSGSLQNGFSSTAPLGTGAVAHPQSYHLGLNSMSWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00402435; iTF_00401375;
- 90% Identity
- -
- 80% Identity
- -