Basic Information

Insect: Culex quinquefasciatus
Gene Symbol: grn
Assembly: GCA_015732765.1
Location: NC:42705917-42736237[+]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.2 6.8e+03 -3.5 0.0 13 23 83 93 83 94 0.82

2 3 2.4e-19 5e-16 57.7 4.3 1 35 361 394 361 395 0.98

3 3 2e-19 4.2e-16 58.0 4.8 1 35 420 453 420 454 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.2	6.8e+03	-3.5	0.0	13	23	83	93	83	94	0.82
2	3	2.4e-19	5e-16	57.7	4.3	1	35	361	394	361	395	0.98
3	3	2e-19	4.2e-16	58.0	4.8	1	35	420	453	420	454	0.97

Sequence Information

Coding Sequence: ATGATGGATGCATCGGCGGTGGAGGCTCGCGGCTGGTACGACAACCAGCGGCTAGCCGCCGAGAGTTCGCTGGGGCCGTCGGCAGCTGCAGCGGCGGCTGCGGCCGCTTCGCTCGGTCAGCaatcggcggcggcggccggaGTTGGCGACGCGTCCGACATGAACGCGTTCTATCGGTTCGAGAACGGAGCGGCGGCCGCAGCCCACCGACGGTACTACCCGACCGGATACGGAACGCACGCCTCCCGGATGTCCCCGCATATGACGCCCCAGGTGTGCCGGCCGCACTTTCCCAGCCCGCTGTCCTGGTTCAACGAGTCGACGAAACCGTTCGCCGCGAGCGGCAGCTGGAGCAGTCCCTTCAGCTGTCCCCAAGACCCCCAGGAAAGCAAACAGAATCAGCAGATGCAGGCCAGCAGTCAGGCCGCGGCCGTCGGCCAGCATCTGTTCTCGTTCCCGCCAACGCCCCCCAAGGACTCGACGCCGGACTCGGTGCAGACGACCCCGAGCGAGTACCAAACCACCCTGAACAACTTCATGCACCTGTCCTCGAGCCAAGCGACCTCCGCCGGCAGTCAGCAGACGCACGGTGCGTCCGgctccagcaacaacaacaacaacaactccagCCTCTCGTCCGAGCAGTGCGGCATCGACGTCAAGCCCTGCCTCACCGGAAGCGGCGGCGGCTCCATGAACGACCGGAGCGTCGTCGGACAGGACGTCGAGCAGAACCAGCCAAAGCATCGGGAAGGTACGGGCAGTAGCAATAACGTCAACAACAGCAGTTCCGCGTCCAGTGCCAACAGTCATGGGGCCTACCAGAACTCCGCGGCGGCGGCCGCCAACTCGTTCAACATGTTTGACGGAACGGGTCACGGCGGCAGCGGGTACGACCACACCGGCTACGGGTTCCACCAGACCACCGGACATGGGATCGGTGGCGGTGGGGGTGGTACCTCCGGTGGGGGATCGTACCAGCAGAGTTCGAGGCCGCCCGGCGGTGGCGGTGGCCTCATGAACAGCTCCCACATGAAGGCCCAGCGGGCCAAAGCGAAATCCAGTGCCGAGGGCCGCGAGTGCGTCAACTGCGGTGCGACGTCGACGCCGCTGTGGCGGCGGGACGCCACCGGCCACTACCTGTGCAATGCCTGCGGGCTGTACTACAAGATGAACGGCCAGAACCGGCCGCTGATCAAGCCCAAGCGGAAACCAGTTACCTCCCAGCAGAGTGCGGCCCGGCGGGCGGGAACCTCGTGTGCAAACTGCAAAACCACGACCACCTCGCTGTGGAGGAGGAACCAGAGCGGCGAACCGGTCTGTAACGCCTGCGGACTGTACTACAAGTTGCATAACGTGGACCGACCGCTGACGATGAAGAAGGAGGGCATCCAGACGCGGAACCGCAAGCTGACGGCCAAATCGAAGAAGCGAAAATCCACGCCCGGGTACAGCTTCTCCTTCGGCGATCTCATGAACCCGCTGGACCACAACAAGTCCTTCCCGGGGGCGTTCCCGACGACGATGGGTCAACACGCGCACCTGTCCGGTGGGTTGCACCCGGCCCACTCGCACATGCACAGCGGTTGGTACACGACCGGACTCGGATCGCTGGGATCTGGGAGCAGCCTGCAGAACGGATTTAGCAGTGGGGCACCGCTGGGAACCGGCGCGGTAGCGCACCCCCAGTCCTACCATCTGGGGTTGAATTCGATGAGCTGGCGCTCGGAATACACGTGA
Protein Sequence: MMDASAVEARGWYDNQRLAAESSLGPSAAAAAAAAASLGQQSAAAAGVGDASDMNAFYRFENGAAAAAHRRYYPTGYGTHASRMSPHMTPQVCRPHFPSPLSWFNESTKPFAASGSWSSPFSCPQDPQESKQNQQMQASSQAAAVGQHLFSFPPTPPKDSTPDSVQTTPSEYQTTLNNFMHLSSSQATSAGSQQTHGASGSSNNNNNNSSLSSEQCGIDVKPCLTGSGGGSMNDRSVVGQDVEQNQPKHREGTGSSNNVNNSSSASSANSHGAYQNSAAAAANSFNMFDGTGHGGSGYDHTGYGFHQTTGHGIGGGGGGTSGGGSYQQSSRPPGGGGGLMNSSHMKAQRAKAKSSAEGRECVNCGATSTPLWRRDATGHYLCNACGLYYKMNGQNRPLIKPKRKPVTSQQSAARRAGTSCANCKTTTTSLWRRNQSGEPVCNACGLYYKLHNVDRPLTMKKEGIQTRNRKLTAKSKKRKSTPGYSFSFGDLMNPLDHNKSFPGAFPTTMGQHAHLSGGLHPAHSHMHSGWYTTGLGSLGSGSSLQNGFSSGAPLGTGAVAHPQSYHLGLNSMSWRSEYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01525596;
90% Identity: iTF_00401375;
80% Identity: -