Basic Information

Insect: Wyeomyia smithii
Gene Symbol: PAXBP1
Assembly: GCA_029784165.1
Location: CM056646.1:274841921-274846126[-]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.4e-31 1.7e-26 95.2 0.0 3 271 640 849 638 851 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.4e-31	1.7e-26	95.2	0.0	3	271	640	849	638	851	0.95

Sequence Information

Coding Sequence: ATGTCACTCTTCCGGAAACCGAAAAAACCGATCCAGCGACGCGTCTTCAGCAGCTATGATGACGAAGAGGATTCTGCCTCCTGCGTCAGTGGCAATTCTGCCCCCTCCGCTCAGCAGGATAATGGTACCCGAATGGAGATGGACTCATCCACACCACCGCCGCCCCCTTCGATTTCTCTGAAATCATCCGCTTCATCCTCCCGGAAGGACAAGAAGCACTCGAAGGGTAGCACCTTGGgctcccagcagcagcagccggtTGGGACCAAGCTCGGCTCGAAAATGTCTTTGCTAAGTTTCGAAGATGAAGAGGAAGGCGAAGTGTTCCAGGTGAAGAAGACTTCCCAGAGcaaaaaagtgatgaaaaaCTTGGACAAGGAGCGTCGCCGAAAACGCCACGCGGAGAAGAATGGTTCCAAAGAGAGCTTCGGCGGATATTCGTCTTCCGCATCAACGAAATCTAGCAAAAATGGCAAAGACTGTGGCGCTGCAGCAGCGGCTACTGAAGACTCTTCTCATAAAGATAAATTTAAAAAGGAAAAGTGTGAAAATCCTAGTTCTAATATCCAAACAGAAATACGCACAGACGACTTTGTGCTCGTGGTCAAGAAATCCGATCCGGATAATGTGATCCTGAATGGGCGGGCGGCTCTGTGTGCCGGCCGAGATGACATGTCCTCTGAGGGTGAGGAGGACCCACCGGATGAGGATTCGGCCGGTGAAGGGCATCACCATCGGTTCGCGAAGCCTGATAACTTCAAGATGTATCTGGAGAATGGAGTGATTCCGGATGCGGCCATGATACATGCCGCTAGAAAGCGCCGTCAGAAGGCCAGGGAACAGGGTGATTTAATACCAGTGGAAGAACCGAAAGAAGATAAGAGCAAAAAACGTGTGGTACGTGAAGATGGTGCTGGAGACGGATCGGACGAAGATGATGACCGGATCGACATGGCAGCAATTACTGGGGCAAAAGAACGCGAAGAACGCAGAGAGCAGTTTTATTCGGTCCAACGTGAAGattctgCGGAGGAATCGGATGTTGAGTCAAAAGAATGGGAGAATCAGCAAATCCGTAAAGGCGTCACGGGAGCGCAGTTGGTATCGGCCCATCAGGAATCTGTTATATCACAATACATGATTCAAGGTTTCAGTCATTCATATCAAACCGAAGAACAACCGCTTTCCACGGCAGCACTGCTGGAACAAGCGTACGCTCGTAGTTCCGGTCTGTCCAAGGCAAACACAAAAGCAGCTTCCGCTGGGTTGATTTCACGAGTTGCTACCAGCGGCAAGCAAGATCAGAAGTCGGGACCTCGAATGCCACAGGAAATTTTAAAGCAGGTCACCGAGCGACTTCAAACGACCAGAGAACTAAACTACAAACATATCGCCGATATCGAACGAATAGTGCAAGAGGTTAAGGTCCTCAAGCTGGACCATCTGCAAAGTGAACAGAAAGCCCCGGCTGCTGCGGCGAAATATCGATTCTACCAGGAGGTGAAGTGCTATGTTAACGATTTGGTAGAATGTTTGGACGATAAAATGCCCCAGATTGTGGCATTGGAGCAGCGCACGCTAAGCACAATGGGAAAATATTCCAGCATGCTGATCGAACGGCGCCGGCAGGATATGCGGGACCAGGCCAAGGAGATGGCCGATGCAGGCAAAACCTTCAAGCGTCAGCACGACGACCCCGATCGGGTGCGACGGGCCGCGGAACGTGAAGGACGTCGAACACGCCGAAGGAGAGATCGCGAGAAGAACGAAACGGCCGATTCCCACCTGGATGGAATGTCCAGCGACGATGAGGTAGCGGACATCGAAGTTCAGCAGTACCAGACAAACATGAAGGACATCGCCCTGGAAGCGTTTCACGTACTCGACGACGCTAGCGAAGAGTACAGCGATATCGGTTGCATACTGGCAAAGTTCCAAAATTGGCGTGAAACCGAAATGGATGCCTACAAAGATGCATACGTTAGTCTCTGCCTGCCGAAGATCGTCGGACCGCTAATTCGGCTGCGGCATGTTCTGTGGAATCCGGTTAGCGGTCATGATGACTTCGATTTCGAGCGAGAAGAGTGGTACCGTAGCTGCGCCCTGTACGGACGCCAGCCAGGCGAAACGGAAACCAGTTTAGCCGAAGATCCGGATGTACGTTTAGTACCtacgcttattgaaaaaattgtgCTTCCCAAGCTGACGGCATTGATAGAGCAAGTGTGGGATCCACTGTCCACCACACAAACGTTGAAGCTCGTACGGTTGATCAACCGTCTTAGTCGAGATTATCCTTCGCTGAGAAGAACCTGCAAACAACTGAGAATGCTCTTTCAAGCAATACTGGATAAACTGAAACTGGCAGTTGATAATGACGTCTTCATTCCGGTTTTCCCCAAACAGATGCAAGAGGCCAAATCGTCCTTCTTCCAGCGACAGTTCTGCAGCGGCTTGAAACTCCTGCGTAACATCACCTGCTGGCAGGGTATCATTGCGGACGGTCCACTGACCGAGTTGGCAATCGGTTCACTATTAAACCGATATTTACTGAACGGGATGCGCGTCTGCACTCCGGTGGATGCCCTTAACAAAGCGTCTATGATCATGTATACCTTACCGCGGGTTTGGCTCACCACCGGATCCGCCATCGTCCAAAGCATGAGCCAGTTTGTGGCGGTGCTGCGCCACGTTGAAGCCCAACTGGATTCGTCGATTGCCGGTCACGGGGAAATAATCAAAAAGGTCCAGGATATCTTATCTAGCTTGCACGTCACTTAA
Protein Sequence: MSLFRKPKKPIQRRVFSSYDDEEDSASCVSGNSAPSAQQDNGTRMEMDSSTPPPPPSISLKSSASSSRKDKKHSKGSTLGSQQQQPVGTKLGSKMSLLSFEDEEEGEVFQVKKTSQSKKVMKNLDKERRRKRHAEKNGSKESFGGYSSSASTKSSKNGKDCGAAAAATEDSSHKDKFKKEKCENPSSNIQTEIRTDDFVLVVKKSDPDNVILNGRAALCAGRDDMSSEGEEDPPDEDSAGEGHHHRFAKPDNFKMYLENGVIPDAAMIHAARKRRQKAREQGDLIPVEEPKEDKSKKRVVREDGAGDGSDEDDDRIDMAAITGAKEREERREQFYSVQREDSAEESDVESKEWENQQIRKGVTGAQLVSAHQESVISQYMIQGFSHSYQTEEQPLSTAALLEQAYARSSGLSKANTKAASAGLISRVATSGKQDQKSGPRMPQEILKQVTERLQTTRELNYKHIADIERIVQEVKVLKLDHLQSEQKAPAAAAKYRFYQEVKCYVNDLVECLDDKMPQIVALEQRTLSTMGKYSSMLIERRRQDMRDQAKEMADAGKTFKRQHDDPDRVRRAAEREGRRTRRRRDREKNETADSHLDGMSSDDEVADIEVQQYQTNMKDIALEAFHVLDDASEEYSDIGCILAKFQNWRETEMDAYKDAYVSLCLPKIVGPLIRLRHVLWNPVSGHDDFDFEREEWYRSCALYGRQPGETETSLAEDPDVRLVPTLIEKIVLPKLTALIEQVWDPLSTTQTLKLVRLINRLSRDYPSLRRTCKQLRMLFQAILDKLKLAVDNDVFIPVFPKQMQEAKSSFFQRQFCSGLKLLRNITCWQGIIADGPLTELAIGSLLNRYLLNGMRVCTPVDALNKASMIMYTLPRVWLTTGSAIVQSMSQFVAVLRHVEAQLDSSIAGHGEIIKKVQDILSSLHVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00948750;
90% Identity: -
80% Identity: -