Mgen009024.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- PAXBP1
- Assembly
- GCA_030247185.2
- Location
- CM058072.1:18901178-18909831[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.076 1.1e+03 0.2 0.1 65 99 511 545 491 556 0.73 2 2 1.2e-31 1.7e-27 98.0 0.0 3 271 634 843 632 845 0.95
Sequence Information
- Coding Sequence
- ATGTCGCTCTTCCGTAAACCGAAGAAACCAATCCAGCGACGCGTTTTCAGTGGCTATGACGATGAGGAAGACTCTGCCACCATTCCAGCCTGCAGCAGCAATAGTGGAGCTATCGGTCAGCATCAGCATAACAATGGCAATCGGATGGATGTGGAGCCAACGCTACCGCCGGCACCCTCGATTAGTTCCAAATCCAAAAAGGACAAAAAACACTCCAAATGCACCTCTTCGTCCTCGGTCTCTTCCCAGGGGACCTCGAGCAAACCCAGCTCCAAAATGTCTTTACTAAGTTTTGAAGATGAAGAGGAGGGTGAAGTGTTTCAAGTAAAGAAAAGTTCACAGAGCAAGAAAGTCATGAAAAACATGGACAAAGAACGTCGTCGTAAACGACATGCCGAGAAGAATGGATCCAAAGATACCGTCAGTTCAATGttttcgtcgtcgtcatcgaaaTCCAACAAAAATGGCAAAGATAATACAGAAGACTCTTCCCataaagataaaattaaaaaggaaAAGTGTGAAAATACTAGTTCTAATATCCAAACAGAAATACGCACTGACGACTTTGTGCTTGTGGTTAAGAAATCCGATCCGAACAATTTGATACTGAATGGACGTGCCGCTCTGTGTGCAGGTAAAGATGACATGTCCTCGGAAGGAGATGACCCGGAAGAGGATGCCGATTCTGCAAGCGAAGGACACCATCGGTTTGCGAAGCCGGACAATTTTAAAGTGTATCTGGAAAACGGTGTCATCCCGGATGCTGCGATGATCCATGCCGCTAGAAAGCGACGGCAAAAGGCTAGAGAACAAGGCGATTTTATACCGATTGAAGAGCCCAAAGAAGATAAAAGCAAGAAAAGAGTAGTTCGCGAAGATGGTGCCGGTGATGGTTCGGATGAAGATGACGATCGAATCGACATGGCGGCTATCACGGGAGCCAAGGAACGCGAGGAACGGAGAGAGCAATTCTATTCCGTTCAGCGAGAAGATTCGGCCGAGGAATCAGATCTAGAATCAAAAGAATGGGAAAACCAGCAGATCCGCAAAGGAGTTACCGGTGCGCAGTTGGTGTCTGCCCATCAGGAATCCGTCATTTCCCAGTACATGATTcaagattatagtcactcttacCTCACTAACGATGAGGAAAAACCACTTTCCACGGGAGCTCTGCTGGAGCAGGCTTACGCTCGTACCACCGGTCTGTCGAGGGCAAACACCAAGGCAGCCTCGGCTGGGTTGATCTCGCGTGTCGCCACTGCCGGCAAACAAGAACCGAAAGTCTCCGGTCCCCGTATGCCGcacgaaattttgaaacaactcAGCGAAAGACTGCAATCTACGCGGGACCTGAACTTAAAACATATCGCCGACATTGAAAAGATTACCCAGGACGTAAAGGTGCTCAAGCTGGACTACATGCAAAGTGAACAGAAGGCACCGGCTGCAGCGGCCAAATATCGTTTCTACCAGGAAATGAAGTGCTATGTGTGCGATTTGATCGAGTGTTTGGATGAGAAACTACCGCAAATTGTGGCACAGGAACAGCGAATGCTTAATTCGATGGCGAAATATTCCAGCATGCTGATCGAACGGAGAAGACAGGACATGCGGGATCAGGCCAAGGAAATGGCAGATGCAGGCAAGAGCATGAAACGCCAGCAGGACGATCCGGACCGAGTCCGGAGGGCAGCAGAGCGGGAGGGACGACGAACAAGGCGACGACGGGATCGCGAGAAAAATGAAACGGCCGATTCCCATTTGGATGGGATGTCCAGTGATGACGAGGTGGCAGACATCGAAACCCAGCAGTACCGGGCGACGCTGAAGGAAATCGCTGTCGAAGCGGCCCAGATATTCGACGACACGAACGAGGAATACAGCGACGTGGGTACCATACTAGAAAAGTTTCAGGGTTGGCGCGAAAACGAAATGGACGCCTACAGAGATGCGTTCGTTAGTCTTTGTCTGCCGAAGGTGATTGGCCCGCTGATCCGTCTGAGACACGTACTGTGGAATCCGGTTAGTGGGACCGATGAATCCAACTTCGAGCGCGAAGACTGGTACCGGAGCTGTGCACTTTATGGTCGCAGCCCGGACGAAACAGAAACCAGTTTGGCAGAAGATCCGGATGTTCGTTTGATTCCCACTCTCGTGGAAAAAATCGTGCTTCCCAAACTAACGGCACTGATCGAACAGGTGTGGGACCCTTTGTCAACGACTCAAACTCTGAAGCTAGTTCGACTGATCAACAGACTTAGCCGTGACTATCCGTCACTAAGGAGAACCTGTAAACAACTGCGAACATTATTCCAAGCGATACTGGATAAACTTAAGCTAGCCGTCGATAATGACGTTTTCATTCCGGTTTTTCCCAAACAAATGCAAGAAGCCAAGTCCTCGTTCTTTCAGCGACAATTTTGCAGCGGTCTGAAGCTACTGCGTAACATAACTAGTTGGCAGGGTGTTATCGCCGATGGTCCCCTGACGGAACTTGCCATCGGATCGCTGCTAAACCGGTATCTTCTGAATGGAATGCGCGTTTGCACCCCAACCGATGCCATCAATAAAGCTTCAATGATTGTGTACACACTGCCGAGGGTTTGGCTCACCGCTGGTTCGTCGGTGGTTCAAACCATGAGTCAGTTTGTTACGATGCTGCAACACGTGGAAAGTCAACTGGATCCGTCGATCGCAGGCCATGGGGAGTTAATCAAAAAAGTGCAGGATATATTGTCCAGTTTGCATGTGGTTTCTTAA
- Protein Sequence
- MSLFRKPKKPIQRRVFSGYDDEEDSATIPACSSNSGAIGQHQHNNGNRMDVEPTLPPAPSISSKSKKDKKHSKCTSSSSVSSQGTSSKPSSKMSLLSFEDEEEGEVFQVKKSSQSKKVMKNMDKERRRKRHAEKNGSKDTVSSMFSSSSSKSNKNGKDNTEDSSHKDKIKKEKCENTSSNIQTEIRTDDFVLVVKKSDPNNLILNGRAALCAGKDDMSSEGDDPEEDADSASEGHHRFAKPDNFKVYLENGVIPDAAMIHAARKRRQKAREQGDFIPIEEPKEDKSKKRVVREDGAGDGSDEDDDRIDMAAITGAKEREERREQFYSVQREDSAEESDLESKEWENQQIRKGVTGAQLVSAHQESVISQYMIQDYSHSYLTNDEEKPLSTGALLEQAYARTTGLSRANTKAASAGLISRVATAGKQEPKVSGPRMPHEILKQLSERLQSTRDLNLKHIADIEKITQDVKVLKLDYMQSEQKAPAAAAKYRFYQEMKCYVCDLIECLDEKLPQIVAQEQRMLNSMAKYSSMLIERRRQDMRDQAKEMADAGKSMKRQQDDPDRVRRAAEREGRRTRRRRDREKNETADSHLDGMSSDDEVADIETQQYRATLKEIAVEAAQIFDDTNEEYSDVGTILEKFQGWRENEMDAYRDAFVSLCLPKVIGPLIRLRHVLWNPVSGTDESNFEREDWYRSCALYGRSPDETETSLAEDPDVRLIPTLVEKIVLPKLTALIEQVWDPLSTTQTLKLVRLINRLSRDYPSLRRTCKQLRTLFQAILDKLKLAVDNDVFIPVFPKQMQEAKSSFFQRQFCSGLKLLRNITSWQGVIADGPLTELAIGSLLNRYLLNGMRVCTPTDAINKASMIVYTLPRVWLTAGSSVVQTMSQFVTMLQHVESQLDPSIAGHGELIKKVQDILSSLHVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01524815;
- 90% Identity
- -
- 80% Identity
- -