Waur000130.1
Basic Information
- Insect
- Wasmannia auropunctata
- Gene Symbol
- Hr39
- Assembly
- GCA_000956235.1
- Location
- NW:178406-204809[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 3.4 1e+04 -5.1 6.9 124 164 36 71 17 102 0.55 2 6 0.63 1.9e+03 -2.7 5.3 73 163 306 396 230 408 0.61 3 6 4 1.2e+04 -8.1 9.7 76 143 437 508 404 541 0.40 4 6 7.6e-08 0.00023 20.1 0.0 1 21 608 628 608 636 0.92 5 6 1.2 3.7e+03 -3.6 0.0 88 113 665 690 638 696 0.62 6 6 6.4e-70 1.9e-66 224.6 0.0 172 408 771 1001 730 1001 0.90
Sequence Information
- Coding Sequence
- ATGTCAGAGCAAAACGGGCCCAGCGAGGGCCCAGGGCCAGGACCCGGTTCGGACTCGAGCTGGTGGCCAACCACGCAGACTTGGAAGTCGTCAGCGGCCGCCTCGTCGTCGACTGCGTCGATCCCGACTTCGGCGGCGGGCTCAGCGTCCGTCTCTGTCTCCTGCTCCGCGTCCAGCTCATCCTCGACGAGTTCCTCCACCTCGATCAACTCGTCCGCGACCTGTTGTCCCTCATCGTGCATCGGCGTGTCCTGCACGATGAGCCCGAGCCGTTCCACGGAGACGGGGAAAAACGTGTCCGTCACCACGATTAACGTACCGCCCAATCAAGAAATGCACGATGGTAAAGGGGTATGTAAATATCTCGGGGGCCAAAACGGCGTGACGGTGTCGGTGGTATCGACCTCGGTACTGGGATGCGGAAACGCGAATGCCGTCCCGACAAGCGGAATCTGCACGAATACGGGGCCGCATAGTATCGGCATCGGAATTGGTGGCATCCTCGCCGCGAACGCGGCCGACATCGATGATCCCGAGGATAGCGACGGTGAGATTAGCAAGATTGACTTTAGAGGCGTCAATCTACGTTCGAAGAAGAAACGCGACGTATCGGGTAATCAGAATGGCGACAAAATCGGTGACGGAGACgcgaacggcgacggcggGGGATGCTGCGATGACAATTCGCAACAGCAGCCTGAGAGGCCTATGTCGTGGGAGGGTGAACTATCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGGACCACAACGAGGAAACGTCCATGGAGGGGGTTCAAGTATGCAGCACGAGTCCTGGGCCTATGGAACAGAAGTTCCCAATTAAGTCGGAGCCGGATTTTCGATCTAGCCCAGGTTTCACAATAGGATCCTTTCACGACGGTGGACTGCCCATAACACACAATCAACAATtgcagcaacaacaacagcaacaACGCGGTATCGAAAATCTCGAACAGACTCAACAGAGCGACCTACCGTTGCTCGTAGGCAAGCTTCTCGGTGGATACAACAACTCAACGCCTAACCACAGTCCTGTTCTCAATCCGCGACATCATCTAACGAAACATAGTCATACTAGATCGCAGGTGCCGTCACCAGATTCCGCCATTCATTCTGCGTACAGCGTCTTCAGTTCACCGACACAGAGCCCTCACGCGGCACGGCACTCCGCCCTAGGAGCGGGTAGTCCGATACCCTCCTCGTCATTGTCCCTCTCTCGACACAGCTTCAACAACTCGACTTCCTCGTTATCCCTGTCGCTGTCGCATTCGCTTTCGAGGAACAACTCCGACGCTTCCAGTAGCTGCTACAGCTACGGCTCGCTTAGCCCGCCTACGCATTCACCCGTCCAGCAGCCGAGACATCCGCACTCGCACTCGCAGCATCATCAGCATCAAGTGGCGCAAGGTAGTCCGCTGCATCTACCAGCCTCGTCCGCCGTTGCCGCACATCATTACTCGTCCTCTTCCATACCAGGCTCGGAATTGTCGCCGGACGGCCATCCCGTTGCGGAGGATCAGGAAGACTGTAGGATACCTTCAGCGCCGTCGGGTATCTCCACCAGGCAACAATTGATAAACAGTCCTTGCCCGATTTGCGGCGACAAGATAAGCGGCTTCCATTACGGCATCTTTTCATGCGAATCATGCAAGGGCTTCTTCAAGCGCACCGTCCAGAATCGCAAGAACTATGTGTGCCTTAGAGGCGCAGGCTGCCCGGTCACCGTGGCCACGAGGAAGAAGTGCCCGGCCTGCCGCTTCGACAAGTGCCTCAATATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGTAGAAGCACTTATCAGTGCACCTATACTCTGCCGGCAAATCTCGTCGGCAGCCCTGCCGGCGGTATGACCAGTGAGAAACTGACGACGGGCAATTGCAGCCCGGCACCGGCCGGCAGCGAGCACCATTATTCCGTTAGGTATCATTCAAATCATTCTCACAAGATGCAAGTAGTACCTCAACTTTTGCAAGATATCATGGATGTGGAGCATCTTTGGCATTATAACGACAACGATCGGGTAAGCGGCAGTGGAGGGATACTTGGTAGTGCAAGGAATGCCGGTGGTGATAGTATGCTGCTCGGCGGACCCGGAAGCGGCCTGGCGTCCAGCGGCACTGGAACCGCGACTGGTATTGTCGCTGCCGGAAACAACGGGGGTGCAGTGGAATGTTCGTCGAATGACTCTGGCAATGTCGATACTAATAGCAGAAGAGTAGAGACGGCGAGCCCCATCGATTCGACCTTAACGGGGGCGTCCGATCAACATTCCACAAATGGCAATATCACTAATAATAGTAATTCTCAAATTGCCAGTAATTCCAACGGTAATTCGGCGCAGCATCCAGACTTTCTATCGAATCTGTGCAACATCGCGGACCATCGGCTCTATAAGATTGTCAAGTGGTGCAAGAGTTTGccattgtttaaaaatatttccatcgACGATCAAATCTGTTTGCTGATCAACTCTTGGTGTGAGCTACTACTTTTCTCGTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAGATAAGGGTATCTCTTGGCAAGTCGATTACTCTTGAACAAGCAAGACAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCGCTTTTACCAACAATCTGCGAAGACTGAGAGTAGACCAATACGAATATGTTGCAATGAAGGGGATCGTGCTGTTAACTTCCGACACAAGCGAATTAAAGGAGCCCGAGAAAGTCAGAGCTTCTCAAGAAAAGGCACTGCAAGCACTGCAGCAATACACACTCGCGAGGTACCCGGAAATGCCTGCCAAATTCGGTGAACTATTGTTGAGAATTCCAGATCTGCAAAGAACATGTCAGGCAGGAAAAGAATTGCTCAGTGCAAAACGCGCCGAGGGAGAAGGCAGCTCGTTTAACCTTTTAATGGAATTGTTGAGAGGAGATCACTGA
- Protein Sequence
- MSEQNGPSEGPGPGPGSDSSWWPTTQTWKSSAAASSSTASIPTSAAGSASVSVSCSASSSSSTSSSTSINSSATCCPSSCIGVSCTMSPSRSTETGKNVSVTTINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNANAVPTSGICTNTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGDANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFTIGSFHDGGLPITHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQHQVAQGSPLHLPASSAVAAHHYSSSSIPGSELSPDGHPVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMTSEKLTTGNCSPAPAGSEHHYSVRYHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRVSGSGGILGSARNAGGDSMLLGGPGSGLASSGTGTATGIVAAGNNGGAVECSSNDSGNVDTNSRRVETASPIDSTLTGASDQHSTNGNITNNSNSQIASNSNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKGIVLLTSDTSELKEPEKVRASQEKALQALQQYTLARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267641;
- 90% Identity
- iTF_00885153;
- 80% Identity
- iTF_01523393;