Vzon029316.1
Basic Information
- Insect
- Volucella zonaria
- Gene Symbol
- Hr39
- Assembly
- GCA_963966105.1
- Location
- OZ014531.1:25478893-25483980[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.047 3.5e+03 -0.9 3.5 100 159 202 259 135 332 0.56 2 3 9.6e-15 7.2e-10 40.9 2.3 1 152 444 577 444 591 0.67 3 3 1.7e-79 1.3e-74 254.1 0.3 200 408 587 788 576 788 0.96
Sequence Information
- Coding Sequence
- ATGTCATCATCAATAAAAAGTGATTCACCCGCATATAATGTGTCTCATGGCAGCACTATCACAAACATTGTCCCACAATCATCGACAACATCATCAATAATACGTAATAATGTTTCTGTAACTAATATCAAATGTGAAGGTGACCGTAATAGCAACGCTATTCGAGCCACTGCATCATCAGGCTGCATAGCTCCAAAGGCTTACTACAACAAAGGCAATGGGGCAATACGAATTCCCGtcacaaagggagatgaatctgATTCAGAAACCGAATTGTCGCATATTGAAAATCTAAAAGTGACTCGTCGGGCAATCAGTCAATCAGTGAAGAATGGACCTCGTCCAATGTCGTGGGAAGGTGAACTTTCCGATACTGAAGCCGATCTTATGGACACAGAAAATTcaacgagctgcgacaaaacGTTTTCTATTGATTCCGTGACAGTAAATAAGAACGATCAGGACAGACGGCCGATACTTGATCAAATCCGCGTTGAAATTAATTCATCACACTTCATCAATAAAAAGCCACAGAGTGATCCTATTAATCTTAAGTATGAACCAGGTCTGCTAACAGATCCAACCAGCAGTAGTAGTTCACCATTACTTGTACGTTCAAAGACGACAGCCAACTTATTGCCTACAAATCCTAGCCCCGATTCTGCCATTCATTCCACATATACACACAGCTCTCCAAGTCAATCGCCTCTTACGTCACGACATGCACCCTATACGCCTTCCTTGAGTCGCAACAATAGTGATGCATCGCATAGCAGCTGCTACTCTTATAGCTCTGAATTTAGTCCGACGCACTCTCCTATTGCAGGTCGTCATAATATGTATGGCAGCTATAATGGGGCTTCACTTCATCATTCCGTTTTATTTCGCCCGACAATTGGTGATAATGGCAGCAGTGCTGTCGGAAATTGTTCTACAGATCCACAAAATCTATCACAAGCCGCTGTAGTAGCAGCGGCAGCGTCTGCGCTGGCCGCAGCAGCTTCTACATCAATTTCTGTAAATGGAAGCACCCCACCTGGATTAAAGACGGAAGAGTTACTTTTTGATAGTGAAGCAATACCATCAGCGGGTATTTCACGCCAGCAGCTAATCAATTCACCCTGTCCTATTTGTGGCGATAAAATATCTGGATTTCATTATGGCATATTTTCATGCGAATCGTGTAAAGGGTTTTTTAAGAGAACGGTTCAAAATCGAAAGAACTATGTTTGTGTAAGAGGTGGGCCTTGTCCAGTAGCTATTTCGACCCGCAAAAAATGTCCTGCCTGTCGTTTCGAGAAATGCTTACAAAAAGGAATGAAATTAGAAGCTATCCGAGAAGACAGGACACGTGGAGGTCGTTCAACTTACCAATGTTCATATACTTTACCTAATTCTATGCTTAGTCCATTGCTGAATAATGAACAACCTGGtcctcagcagcaacaacaacaacataattCCCGAATGGGGCTAAATGGGTTTGTTATAAAAACAGAGCAGCCTGATAGTAGCGCTGGTGGTACTTCCACTCCAACGCCAGGAAGCAGCAGTCACCAGCATTCTACACACCAAGATATTCCCACTCTTCTGCAGGAAATAATGAATGTTGAGCATCTTTGGCAATATAATGCAACTGAGTTGGCACGACTTAATCAGCCTTTAACGACTTCGTCTTCGTCATCGCCATCACCGGTATCGACAGCCACGTCTGGTAGTATTGCATCAAATCCGCTGCTGGCCAGCGCTGGTCTTTCCTCTAATGGGGAAAATGCAAATCCAGATTTAATTGCAAACCTGTGCACGGTAGCTGATCATCGATTATATAAAATTGTGAAATGGTGCAAAAGCTTACCACTGTTTAAGAATATATCAATTGATGATCAAATTTGTTTGCTGATAAATTCTTGGTGTGaacttttgttattttcatGCTGTTTTCGGTCGATTGATTCACCGGGTGAGATAAAAATCTCACAAGGAAAATCAATAAACTTAGATCGAGCGAAGTCGAATGGTTTGCAGTCGTGCATCGAACGAATGCTCAATTTGACAGACCATTTACGACGATTGCGGGTCGATCGATATGAATATGTTGCCATGAAGGTTATTGTTTTGCTTCAATCAGATACTTCTGAATTGCAAGAGCCAGTTAAAGTTCGTGAATGTCAAGAGAAAGCTCTACAATCTCTACAAGATTATACTTTGGTTCATTACCCAGAAATGCCATCAAAATTTGGTGAATTACTTCTTAGGATTCCCGAGCTACAAAGAACTTGTCAACTTGGCAAGGAAATGCTAACAATCAAGTCCCGTGATGGAGGTGATTTTAATTTACTAATGGAGCTTTTACGTGGAGAACATTGA
- Protein Sequence
- MSSSIKSDSPAYNVSHGSTITNIVPQSSTTSSIIRNNVSVTNIKCEGDRNSNAIRATASSGCIAPKAYYNKGNGAIRIPVTKGDESDSETELSHIENLKVTRRAISQSVKNGPRPMSWEGELSDTEADLMDTENSTSCDKTFSIDSVTVNKNDQDRRPILDQIRVEINSSHFINKKPQSDPINLKYEPGLLTDPTSSSSSPLLVRSKTTANLLPTNPSPDSAIHSTYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIAGRHNMYGSYNGASLHHSVLFRPTIGDNGSSAVGNCSTDPQNLSQAAVVAAAASALAAAASTSISVNGSTPPGLKTEELLFDSEAIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVAISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLNNEQPGPQQQQQQHNSRMGLNGFVIKTEQPDSSAGGTSTPTPGSSSHQHSTHQDIPTLLQEIMNVEHLWQYNATELARLNQPLTTSSSSSPSPVSTATSGSIASNPLLASAGLSSNGENANPDLIANLCTVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDSPGEIKISQGKSINLDRAKSNGLQSCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELQEPVKVRECQEKALQSLQDYTLVHYPEMPSKFGELLLRIPELQRTCQLGKEMLTIKSRDGGDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311850;
- 90% Identity
- iTF_01521119;
- 80% Identity
- iTF_01522726;