Vzon005840.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Volucella zonaria
Gene Symbol
rfx7.L
Assembly
GCA_963966105.1
Location
OZ014530.1:74210302-74225551[+]

Transcription Factor Domain

TF Family
RFX
Domain
RFX domain
PFAM
PF02257
TF Group
Basic Domians group
Description
RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-31 4e-27 96.6 0.0 3 78 361 436 359 437 0.97
2 2 1.1 4.1e+04 -2.8 0.6 22 39 767 784 760 790 0.80

Sequence Information

Coding Sequence
ATGTCCGAGAAAAATGTACACCAATTGCAATGGAAACAAAAGAATCAGGATCAATCGATGTACGCCTCTCGAAATGCTGGTATACAATCAACAACAGCGATTTCCAATCAgtcagcaacatcagcagcaggTGCAGCTACCACCATATCAAATCATCCATCACATTCAGGAGCATTACTTGGAACACCTTCTAATGGCCGTTATCCGATAATTGTATCTGGTGGTAATCCACAGTCATCGGGGCCACCTCCAGGTACATCGGGCACACCAAgtacatcaacatcatcatctgCTGCGATTGGCcttcaacattttcatcatatGCATCAActtcagcaacagcagcagcatcaactatcacagcagcaacaacaacagcagcaccagcaccagcatcaGCATCAACATCAGAGTCATCATCCTCCTCCACCTTCTTCTACTCATCAAACGAATGCACATTTTGAACTATCTAAAATTATGGCCAATTCGGGAGCATTAACCAGAATGGAACTACCTCCGAGTTTGGGCAACCATCCCGTGTCGAGTGCGATAACAGAGAATGTCTTAAGTCTGATTGGAATGTCACCGTCTAGTGCAGGCAGTTCAAATAGACCTGGTGACAGTATTAAGATTCCAGATGAGGAAAAACTGCGAAAGGTTCAAACATTTGTGGAGTCTAATATCGGTCATGATTATAATGAGCCAGATTTTAATTTGGTTGCCATGAATTTTGAGgaatttttgagagaattgacAACAGATGATGATGCAACTTCAACTCCTTCAGGACCTGATTCTGATATTTCTTCAGTGACTTCATGTGGGTCAGGTTCAAATTTACAGCCTGAGGGTCAGCAACCTCAGTTAATATTATCTTTTGATTCGGAGGACGATATTCCTCTTTTGGAAATCCAGTTCCTTGATCATGCGAGACAGCAGATTTTACAAATCATAGACAGAATTTCAACATTAAAACCAGTTGAGCGATTACTTTTGTACCTACGGATGCCGGGAGAAACTCCAGAATCAGATCCTCTTAGGCAACCGCAAAATCCTCTAGGAGCTCGATCTGAAATAAATCACACAATCAATTGGGTTCGCTCGCATTTAGAACATGATCCAAAGGTTTCCATCCCAAAGCAAGATGTTTACAACGATTACATTTTATATTGTGAGCGCTTGGATATAAAACCTTTGTCGACAGCAGATTTTGGAAAAGTCATGAAGCAAGTGTTTCCTGAAATTCGCCCAAGACGTTTGGGAACACGTGGTCATTCAAGATATTGCTACGCGGCCATGCGAAAAACAACAAAGCTTACACCACCACAATTACCAATGCTAGGAGGGAAAAATATAGATGCGGCCAATAGTGAAATAGAATGTGTCCCAGATGCAGAATCGTGGAACACTGTTCGGACATGGGCTGAAGGATTGTTGAATGCGAAATTTGATAGCATCAAAGATTTAGCTGAGCACATTGGTAAGAGTGATTATGTTGGTAGTGGAGCTGGTAGTTCTAGAGTTCTACTGCAGAAGAAACTTTTGCAAAGAGACGCGAAAGAAAAGCGAGTTTATGCTGATTCTGGACCGCTAAAGAAACGACGGAAGAAAAAACGTAAAGGTTCTACTTCCTCCGAATCAAGCACTACGCAGCAGACATCATCTGTGGGTTCACTAAATGACCCCTCACGATCATGTGATGACATTCTTATTGCCCCACACACAATTAAACAAGAAGTTTTAGACTCACCAAATTCACAGCCTCAAATACCAGTGGTAGCGCAAATGAATTTGCAGCATGCTACGGCGTCTTATGATGGCCAAATGCATAGCCATCAATTGCTTCCAATGAATTTAGCAACAGAGAACGAACGCACCAAGTCCTTAGGTCAACTACCAACAAACAGTCCAGTGGCaaaaaatcttacaaaagcAATTTCTGACCTTGCGCCGTTAGTAAACCTGTTGCCTATTGAACAGCAAACAGCACAACTAGCCTCTGTAAAAGAAGAGATAATTAACGATgaatacaatccacaaaatGTGATatgcaaaaaagtacgaagggCACATTTAACGAAAGGTATTTTAGCTACAAGTAACTCTACTTCTTCAACGATCACCACATCAAGAGGGACTGCAATTGAAGCACCAACTGCGCCACCATCAATTGCACTATCACCGGCAGCTGTAAACCACTACTCAATGGGACCTCCTGCACAGACAACAACCACAGCAATGGAAACAGCGAAAGTAGCCTCACAATTACGCGCCAAAAAATTGCGTTATTTACAGGCTCATTCTGAGATGTACCAGACCTATgatcagcaacagcagcagcagcagcaacaaaatcaacatcaaTCGCCTTTAGTAGATAATGTTGAGATAACAGAGGATAAAGATGTAGTGCCCGAAAACCTAGGTTTGCCGCGTGAGCGCGTTATAAGTATTTGTAATATGGACAAACATGAGTTAGATGATTATTTGAACGCAAACGACGAAGAGAACTCCCAAGATCAAGACGCTGAATTACTTCAATATTTTCAGACGGGAGACGCTGAgaacaacaataataacaacaaagaAACGCAGCTGCaaccgcaacaacaacagcaccagcaGCAGCCAAATATAGATGCACCAAACCCAACGTTGACAGAGATGAACTCCAATTCGGCATTTGAAAtaccaaataagaaaaaatccattggtACAACAGGTAGCGGCTGTATTACGAAAGATCGTGATGACATAACACAGCTTCGTAATTATCTTCATCAAAATTTGGAGACAATTGGAGCATTAGCAGCAGGAGCTACAGTTCATCAAAAAGGAAATATCCAGGTGGAAAAATGTCCGTCAAATGGAAACCATTATATCATGCCGGGCATATACAACGAAGGGTCAGCCTCAGCGTCTCTAGCAATCATGTCTCAAAAGCATCTTAAACAAGCAGCATCACCATCAGTTGCCATGGGTACTGCTGCAGTTGGAGCAGCATCTGCTACACATACAGTGGCACCACCCTCTAATATTGGCATCACTACTTCAACAATAGATACATTGGCTATAACACCTGATGAATATACAGCTGTTCCAAATAATGTGCGCGCAACACAGAAGAGAAAGATAAACCTTAACGCAATGGTACCTGCTTCAAATACAACACAACGGCGAAAGAACTGCACTTTCTTTCCAATTTCGCCAAATATAAATCTTACCAATACTACTATAAACAGCACATTGACTCCATCTAGCACTACTTCCATGTCCGCTGCACCCAACATAAATCTTTTTGCTAGTCCAAGGCCGACAACTTTTTCAGTGCGAAATAAGCCAgtgctacacaaacaacaaTCGTTGCCAGCAGCAGACAAGAATGTTATTACATCCGCTAACGATCCAATGATTGGAGCTACTCGCAACAATAGAAGCTACAATTCCATAACTTCGGCATCAGCACCGCCCAGTCCGTCAATATTACAAGACACGATAATGCTTAGCAAAAGTTATGTCACTGTACCCGGCAATCCTATGGGCGGATACAATTCACTTCTATTGAATCACGACTACCAACATGAATTTGCAAATTCATGTGGAACAAACAAAATGCTGCCAAACGACCAAAATTCTTTAGAGTGTGTTTTAGATGAACCTCCTTCACATTTGATGGCAGAATCGCGTTCAAGAAGTGTTCCACTTCAGTATTGCAATAGCCCCGCGTTTAATCAGACTACAAACTATCCTGGTTTCTTATCGACTTGTAGTTCAGCTGCACAAACTCCAGTGCCACCACATTTTGCTGATTTCAATGACACATCATCAATTTTAGATATTTTCAGCGATACAAGTCAAACACATGGAACATCAATTAAACTGGAGGAATCTACTGGAAGTCTACTTTGCGGTTCTGTTGCTGATATTCTACCTCCAGAGAATGTAATTCCAGAATATGGTAGAATTCCGACTAATTTTGGTGGAATTGTCTCTAGATCAGTACCATCAACGCCTTTACCGCTGCAGAATGCTATTGATCCGTTTTTTGGTAGCAAAAATCATGAACAGAAACAAGACATCACCTCCAgtgcacaaaataaatattcaacgaAAATGTACGATATTTCCAAGTCAATGCCCACAACACCGATAACGTCAAACACAGCTACGCCATCGTTCCGCTACAGTCCGGAATTCAATCGTGATTTTCTAATCAACGGTAATACCGTGGAAAGCACTCCCGCATATAGTCGAGCTCCATCTGTTGCAGCAGGCACAGCACCCAGTCTGACTGATTCATTACTTGACGATGGCAGAGAAGGTGAATCCAATTCACTAACCGATGGCATGGATGACTTAGGCAGTTTCGGTGAGGTATCCGAGGCAGACATTCTAAACATGAATAATCTTTGA
Protein Sequence
MSEKNVHQLQWKQKNQDQSMYASRNAGIQSTTAISNQSATSAAGAATTISNHPSHSGALLGTPSNGRYPIIVSGGNPQSSGPPPGTSGTPSTSTSSSAAIGLQHFHHMHQLQQQQQHQLSQQQQQQQHQHQHQHQHQSHHPPPPSSTHQTNAHFELSKIMANSGALTRMELPPSLGNHPVSSAITENVLSLIGMSPSSAGSSNRPGDSIKIPDEEKLRKVQTFVESNIGHDYNEPDFNLVAMNFEEFLRELTTDDDATSTPSGPDSDISSVTSCGSGSNLQPEGQQPQLILSFDSEDDIPLLEIQFLDHARQQILQIIDRISTLKPVERLLLYLRMPGETPESDPLRQPQNPLGARSEINHTINWVRSHLEHDPKVSIPKQDVYNDYILYCERLDIKPLSTADFGKVMKQVFPEIRPRRLGTRGHSRYCYAAMRKTTKLTPPQLPMLGGKNIDAANSEIECVPDAESWNTVRTWAEGLLNAKFDSIKDLAEHIGKSDYVGSGAGSSRVLLQKKLLQRDAKEKRVYADSGPLKKRRKKKRKGSTSSESSTTQQTSSVGSLNDPSRSCDDILIAPHTIKQEVLDSPNSQPQIPVVAQMNLQHATASYDGQMHSHQLLPMNLATENERTKSLGQLPTNSPVAKNLTKAISDLAPLVNLLPIEQQTAQLASVKEEIINDEYNPQNVICKKVRRAHLTKGILATSNSTSSTITTSRGTAIEAPTAPPSIALSPAAVNHYSMGPPAQTTTTAMETAKVASQLRAKKLRYLQAHSEMYQTYDQQQQQQQQQNQHQSPLVDNVEITEDKDVVPENLGLPRERVISICNMDKHELDDYLNANDEENSQDQDAELLQYFQTGDAENNNNNNKETQLQPQQQQHQQQPNIDAPNPTLTEMNSNSAFEIPNKKKSIGTTGSGCITKDRDDITQLRNYLHQNLETIGALAAGATVHQKGNIQVEKCPSNGNHYIMPGIYNEGSASASLAIMSQKHLKQAASPSVAMGTAAVGAASATHTVAPPSNIGITTSTIDTLAITPDEYTAVPNNVRATQKRKINLNAMVPASNTTQRRKNCTFFPISPNINLTNTTINSTLTPSSTTSMSAAPNINLFASPRPTTFSVRNKPVLHKQQSLPAADKNVITSANDPMIGATRNNRSYNSITSASAPPSPSILQDTIMLSKSYVTVPGNPMGGYNSLLLNHDYQHEFANSCGTNKMLPNDQNSLECVLDEPPSHLMAESRSRSVPLQYCNSPAFNQTTNYPGFLSTCSSAAQTPVPPHFADFNDTSSILDIFSDTSQTHGTSIKLEESTGSLLCGSVADILPPENVIPEYGRIPTNFGGIVSRSVPSTPLPLQNAIDPFFGSKNHEQKQDITSSAQNKYSTKMYDISKSMPTTPITSNTATPSFRYSPEFNRDFLINGNTVESTPAYSRAPSVAAGTAPSLTDSLLDDGREGESNSLTDGMDDLGSFGEVSEADILNMNNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01520711;
90% Identity
iTF_01520711;
80% Identity
-