Vina021035.1
Basic Information
- Insect
- Volucella inanis
- Gene Symbol
- -
- Assembly
- GCA_907269105.1
- Location
- OU026155.1:106856868-106883340[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-10 1.4e-07 32.1 0.0 1 38 499 537 499 542 0.89 2 4 3.2e-13 4.4e-10 40.1 0.1 2 39 554 591 553 594 0.94 3 4 9.6e-18 1.3e-14 54.6 0.0 1 45 608 653 608 653 0.98 4 4 4.5e-19 6.3e-16 58.8 0.0 1 42 660 702 660 705 0.96
Sequence Information
- Coding Sequence
- ATGGAAGGTCTTCTGCGGACAGCtgaacaattaaaaatcaaaggcCTTTGCGAAACAGCCGAAAGTGTTGATGATATCTCAGAGGCAGCAACAGCAACCATAACAGTGTCGGAGAATATAACACAGGCCGTTGTTGGGAATATAGTTAATCAAAGCCAGGGTAATGCAATAGTCACTACACACACAATTGCAAACAACAACACAAATACCCATACAACAACagctaatttaaataataatattaattcaaatattAATGCTGTAGTTGCACCAACATCGGCTACATCTACGCCGCAGCTGCGAAAATCTCGGGTCAGAAAACGCTCAAAGTCTCCGGACACGaatcagcaacaacagcaacagcagcaacaacaacagcagcaacagcaacaacaacagcagcagcaacaacaacagcatcaacagcagcagcaacatcaacaacagcaacagcagcagcaacagcatcaacatcatcaacaaaTCAAATTCGAAAGTCAAAATTTGAATACAGCAGCAATAGTTAGCCTGCAACAGACATCATCGGGTAGTTATATACCAGTTTCTGGGGGTCAAGCGATAACAACGACAGCTGTTAGCCAACAAAATTCCGAAGACTCTGATTCGGATAAGCCAAGTGCTCAGAAAATTTGCAAAACTGAAACTGGTAATTCACCGACATCGAATAATGGCAGTGTAACTGTCGCACAGGGAACAGCAATTGTGACACAAATCGTAGTAGCACGCGACGGCAAAGATAAAAACATGACCAGCCTAGGAATGGGAATGAACGGTGGTATCCTCGGAGTACCAATGGGCTTTTTGGATTTTGCACCTGAACCACCAGCACCATCAGCAACACCTGTAACTGTGACTGAACATGTCGATTTGTCGTGCAATCCCAGTACAGATACCAGAGACTTATCAAATCCCACCGAAGCGCTCGATATTGACAATCATTTAGCTCAACATATGATCCAAAGGCTTGATCAATCACCAATGCATACGATCCACCATCAGTCGTCTACTGGCGATGAGAGTAACTCTAATCTAATTCAACATATTAAAAGTGAAGTGATTGAAgtgaaacaacagcaacagcatcatcatcagcaacaacagcaacagttgCATGCACAAGCTTTATCCCAACAAGGACAAtctcaacagcagcaacaacagcaacatcagcaacaacagcagcatcaacagcagcaacaacagcaacagcaacaacatcagcagcatCAGGACATTTCCGGAGCAACTGTCATGGAAATCGATCCGAGTAATATAAAACATGAGCCAGGAATGATTATAACACCGGAAATTGTTACCATGATGGCAACTGGTCAAATGGATATATACTCAGATGCCAGCGAGGATTCATTGATGATTGCGAATGGTTCCCCAAATGACAATAATGAGCCACACTATACAAATTTGGACCAACCACATGATAAACAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAATATGAGTTTGACGAAAGCCTCTGTGACGTATGGTATCCCATCAACAACATTATGGCAACGTGCCCATCGTATGGGCATTGAAACACCCAAAAAGGAAGGCGGTACTAAATCATGGAATGAAGATTCATTAAACAGTGCCTTGGAGGCATTACGAACTGGTCAAATATCAGCAAATAAAGCCTCTAAAGCATATGGTATTCCGTCCTCAACATTGTATAAAATTGCACGACGCGAAGGTATACGACTGGCGGCACCATTTAATGCAGCTCCAACAACATGGACGCCAGAAGATTTAGAACGTGCACTGGAAGCGATTCGTGCTGGTCATACGTCCGTCCAAAAGGCCAGTTCTGAATTTGGTATACCAACAGGTACTCTTTATGGTCGCTGTAAACGTGAGGGTATTGAATTGTCACGTTCAAATCCAACACCATGGTCTGAGGATGCTATGaatgaagcattaaattctgtTAGagTGGGACAAATGTCTATTAATCAAGCGGCTATTCACTATAACCTACCCTATAGCTCATTATATGGTCGTTTTAAACGTGGTAAATACGATATAGCCAATACGAGTGCGTCGTCAATAAATAATACATCAGGAAATACAAGTGGAAGCATTGAAATAATCGAACATAGTCCAGAGAATTCGTTACACATGTTTCAGCAACAATTCCAATATAGTCCAGCGCCGCAGTCTAATCATCAAactcagcaacagcaacagcagcaacagcaacagcagcagcagcagcaacaacaacaacagcagcaacaacatcaacaacaccaacagcaaCCACAACACATCCACCAACATGTTGTACACATTCAACAACAAACCCCACAACATCATCACCAACAACATATCCAACAACAAGATGTTGTTACATCAACAAGTCAGGTTCACACCCAAGCTGGACAAATCCAACAGATTTACCACCATCACAGTACCCCTGAGAGGAGTTga
- Protein Sequence
- MEGLLRTAEQLKIKGLCETAESVDDISEAATATITVSENITQAVVGNIVNQSQGNAIVTTHTIANNNTNTHTTTANLNNNINSNINAVVAPTSATSTPQLRKSRVRKRSKSPDTNQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQHQQQQQQQQQHQHHQQIKFESQNLNTAAIVSLQQTSSGSYIPVSGGQAITTTAVSQQNSEDSDSDKPSAQKICKTETGNSPTSNNGSVTVAQGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKQQQQHHHQQQQQQLHAQALSQQGQSQQQQQQQHQQQQQHQQQQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGQMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPHDKQGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDIANTSASSINNTSGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQQHQQHQQQPQHIHQHVVHIQQQTPQHHHQQHIQQQDVVTSTSQVHTQAGQIQQIYHHHSTPERS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314183;
- 90% Identity
- iTF_01542127;
- 80% Identity
- -