Basic Information

Insect: Volucella bombylans
Gene Symbol: -
Assembly: GCA_949129095.1
Location: OX422144.1:94748459-94768612[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.8e-05 0.016 17.9 2.1 1 23 376 398 376 398 0.96

2 18 9.9e-06 0.0042 19.8 0.4 1 23 404 426 404 426 0.97

3 18 1.9e-05 0.0081 18.9 0.5 1 23 432 454 432 454 0.98

4 18 1.6e-05 0.0069 19.1 3.1 1 23 460 482 460 482 0.97

5 18 3.7e-05 0.016 18.0 4.7 1 23 488 510 488 510 0.99

6 18 6.4e-05 0.027 17.2 5.6 1 23 516 538 516 538 0.97

7 18 1.8e-07 7.6e-05 25.3 4.3 1 23 544 566 544 566 0.98

8 18 1.2e-07 5e-05 25.8 2.4 1 23 572 594 572 594 0.97

9 18 0.00016 0.067 16.0 5.7 1 23 600 622 600 622 0.97

10 18 2e-05 0.0084 18.8 6.5 1 23 628 650 628 650 0.98

11 18 3.3e-06 0.0014 21.3 4.5 1 23 656 678 656 678 0.98

12 18 7.7e-06 0.0033 20.1 8.1 1 23 684 706 684 706 0.98

13 18 1.9e-06 0.0008 22.0 7.9 1 23 712 734 712 734 0.98

14 18 7.1e-07 0.0003 23.4 7.7 1 23 740 762 740 762 0.98

15 18 0.00022 0.094 15.5 9.5 1 23 768 791 768 791 0.95

16 18 0.00019 0.079 15.8 0.5 1 23 797 819 797 819 0.97

17 18 0.00083 0.35 13.7 4.4 1 23 829 851 829 851 0.98

18 18 6.9e-06 0.0029 20.3 1.7 1 23 857 880 857 880 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.8e-05	0.016	17.9	2.1	1	23	376	398	376	398	0.96
2	18	9.9e-06	0.0042	19.8	0.4	1	23	404	426	404	426	0.97
3	18	1.9e-05	0.0081	18.9	0.5	1	23	432	454	432	454	0.98
4	18	1.6e-05	0.0069	19.1	3.1	1	23	460	482	460	482	0.97
5	18	3.7e-05	0.016	18.0	4.7	1	23	488	510	488	510	0.99
6	18	6.4e-05	0.027	17.2	5.6	1	23	516	538	516	538	0.97
7	18	1.8e-07	7.6e-05	25.3	4.3	1	23	544	566	544	566	0.98
8	18	1.2e-07	5e-05	25.8	2.4	1	23	572	594	572	594	0.97
9	18	0.00016	0.067	16.0	5.7	1	23	600	622	600	622	0.97
10	18	2e-05	0.0084	18.8	6.5	1	23	628	650	628	650	0.98
11	18	3.3e-06	0.0014	21.3	4.5	1	23	656	678	656	678	0.98
12	18	7.7e-06	0.0033	20.1	8.1	1	23	684	706	684	706	0.98
13	18	1.9e-06	0.0008	22.0	7.9	1	23	712	734	712	734	0.98
14	18	7.1e-07	0.0003	23.4	7.7	1	23	740	762	740	762	0.98
15	18	0.00022	0.094	15.5	9.5	1	23	768	791	768	791	0.95
16	18	0.00019	0.079	15.8	0.5	1	23	797	819	797	819	0.97
17	18	0.00083	0.35	13.7	4.4	1	23	829	851	829	851	0.98
18	18	6.9e-06	0.0029	20.3	1.7	1	23	857	880	857	880	0.96

Sequence Information

Coding Sequence: ATGCCTTTTACGTTACAGCTTGGAAAATACTGGGTTGTTACGAATCTATTTCAGGGTCCAGGTCAACCGCCATACAATATTGGTGTAACACCAACAACCTCAGCAGTTCCTACACTACCGCCTCCGATTTCGTCATCTCATTCAAGCGCCTCAGCAACAAAATCAGGAAGCTCtaagcaacagcaacaagatCAACTAGCACCTAATTCGCACACTCAAACCCCAGCACATATAGTATCGTCGGTGGGTGCCACATCGTTACAAATACCAAATCCAATGATTACAAACGCAGCGATGACTCAGCATCAGCTACCGAATGGCACAATTATTACAGCTCCACGTCATCCGGATTCTTTACACGTCCATGGAACGATGTCCTCCGAAGATAATCGACACGTCTCACACGGTATGCAAGACATAAAGGAGGAGAAACCTTTCGCAAATGGGAAACAAAATAATCACATGGCCCATGTCAATCCAGTATCGTCGGTTTCATCGAAAATGAATTCTGGCAGTGGTGGCAACAATGCGCAATCAGCCGAATCAGGCGCTGGTAGTAGTGGACAAATGGTTAACAAATTACAatctggtggtggtggtgggcCTGGTGTAAGTGCTACTGTTGCCGGAggtggtggtggcggtggtACCGGTGCCACTGTCACAGGTAATGAACAACAAGAACTAGGTGGTGTCAAACAACCACCACACGGTGTCGAAATGTACAAAGTTAATATTGAAGATTTGAGTCAATTTCTATCATATCACGAGGTCTTTGGCAAAATTCATGGTGAAGTTATAAATCAACAGCAAATATCATCGCACACGGTAACGCATCCTACTACGAATGTATCAACCTCAAATGCTGGTGGCAATACTTCTGTAAGTGGTACTGCTACCGGTACACTACCTCCACCTCCGCCACCATCGACAAATGGCAATTCGATAGTGACAACCAACAGCCTTACCAGTTCGGGAACTGGTGCACAAGCAGCTCCGCCAACTGGAGGTGTGCCTACTGCCCCCGGTGACCTGATACTGCCGAAAATGGAAAATCAAGGAATGGGTGTTGATCAGAATACACCATTGTTGGCACCAGACGGTACACCCATTATGGGTGGCACGCATATCTGTGACATTTGcggtaaaatgtttcaatttcGCTATCAACTTATTGTTCATCGTCGCTATCATAGCGAACGTAAGCCATTCAATTGCCAAGTATGCGGACAGGGATTTACAACATCGCAAGATCTCACACGTCATGGTAAGATCCATATTGGTGGGCCAATGTTCACATGTGTCATTTGCTTTAATGTGTTTGCGAATAATGCCAGCCTGGAGCGGCATATGAAACGTCATTCGACCGATAAGCCATTCGCGTGCACCATATGCCAGAAAACATTTGCCCGCAAAGAGCATTTGGACAACCATTTTCGCAGTCATACGGGCGAGACGCCATTCCGTTGTCAGTATTGTGCGAAAACGTTTACGCGAAAGGAACACATGGTGAATCATGTGCGCAAGCATACCGGGGAGACGCCGCATCGTTgcgaaatttgtaaaaaatcttTTACGCGGAAAGAGCACTATGTAAACCATTACATGTGGCATACAGGTCAAACACCGCATCAATGTGAAATTTGTGGGAAGAAATACACTCGAAAGGAACATTTAGCTAATCATATGCGATCCCATACAAATGATACACCATTCCGGTGTGAAATATGCGGCAAGAGCTTCAGCAGGAAGGAACACTTTACCAATCACATTTTGTGGCATACAGGAGAAACCCCCCATCGCTGTGATTTCTGTGCGAAGACGTTTACCAGGAAGGAGCATCTTTTAAATCATGTCCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAAACCCCCTTCAAGTGCACCTACTGTACCAAGGCGTTTACCCGAAAGGATCACATGGTCAATCACATCCGTCAACATACTGGAGAGTCACCACATAAATGCACATACTGCACGAAAACCTTCACAAGGAAAGAACATCTAACCAATCATGTGCGTCAGCATACGGGTGAGTCGCCACATCGTTGCACCTACTGCAAAAAAACCTTTACACGCAAGGAACACCTAACAAATCACATCCGGTTGCATACCGGCGATTCGCCTCACAAATGCGAATACTGCCAAAAGACGTTCACACGCAAGGAACACTTGAACAATCATATGCGACAGCATTCAAGTGACAACCCACATTGCTGTAACGTATGCAATAAACCGTTTACACGCAAGGAACATTTGATCAATCACATGTCACGCTGTCACACTGGTGATCGACCGTTTGCATGTGAAACATGCGGCAAAAGTTTCCCACTCAAAGGCAACTTACTCTTCCATCAACGCAGCCACACCAAGGGTCAAGAGTGTGAACGTCCGTTTTCGTGCGAGAAATGCccgaagaattttatttgcaaagGTCATTTAGTTTCACATATGCGTTCGCATTCTGGTGAGAAGCCGCATGCGTGCACCATGTGCAGTAAGGCATTTGTCGAGAGGGGCAATCTCAAGCGTCACATGAAGATGAATCATCCAGATGCAGTTAtgccaccaccaccaacaccaaTTCCAGGAATTTTGACGCAAATTAAACAGGAGATCAATCCAATAATAAttccaCATCAACCTCCAACAATGCACACAATACAGCAAATCACTTCAACTGCAGGCAGCTCAAGTGCAAATAATCCAGGAAATCCAGCCCTTTTGACGCCTGGTCTTGTACCAATGGTACCATCTACAATAACTTCACATATAAATCAGAAACAGCAATcgcatcaacagcagcaacagcaacagcaccagcatcagcagcaattgcaacagcagcagcaactcTTGCAGCTATCAATTCAACATGCAGCTCAACATCAACAAGCCGAACATcgtcagcagcagcaacaacaacagcagcaacaacaacaacagcagcaacagcagcagcaacaacaacaacagcaacaacaacagcagcagcagcagcaacaacaccaacagcagcaaagtcatcagcaacatcaacagcagcagcaagctcAATCACAGCAGCAACCTCAACATCAACAGCCACAACCGCCACCAGTGCCGATAGCCCTTATTGGAGCTGATCCATCAGCGTTAGCTCGGGCTGCTATGCAATTGCAACATTTGCCAACGAATGTCGAACAACATCCAGTGGTATACTAG
Protein Sequence: MPFTLQLGKYWVVTNLFQGPGQPPYNIGVTPTTSAVPTLPPPISSSHSSASATKSGSSKQQQQDQLAPNSHTQTPAHIVSSVGATSLQIPNPMITNAAMTQHQLPNGTIITAPRHPDSLHVHGTMSSEDNRHVSHGMQDIKEEKPFANGKQNNHMAHVNPVSSVSSKMNSGSGGNNAQSAESGAGSSGQMVNKLQSGGGGGPGVSATVAGGGGGGGTGATVTGNEQQELGGVKQPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISSHTVTHPTTNVSTSNAGGNTSVSGTATGTLPPPPPPSTNGNSIVTTNSLTSSGTGAQAAPPTGGVPTAPGDLILPKMENQGMGVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHYVNHYMWHTGQTPHQCEICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPIPGILTQIKQEINPIIIPHQPPTMHTIQQITSTAGSSSANNPGNPALLTPGLVPMVPSTITSHINQKQQSHQQQQQQQHQHQQQLQQQQQLLQLSIQHAAQHQQAEHRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQSHQQHQQQQQAQSQQQPQHQQPQPPPVPIALIGADPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00315368;
80% Identity: -