Basic Information

Insect: Volucella bombylans
Gene Symbol: -
Assembly: GCA_949129095.1
Location: OX422141.1:113898540-113939475[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 4.7e-10 3.6e-07 32.1 0.0 1 38 494 532 494 537 0.89

2 4 1.5e-12 1.1e-09 40.2 0.1 2 39 549 586 548 589 0.94

3 4 4.5e-17 3.4e-14 54.6 0.0 1 45 603 648 603 648 0.98

4 4 2.1e-18 1.6e-15 58.9 0.0 1 42 655 697 655 700 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	4.7e-10	3.6e-07	32.1	0.0	1	38	494	532	494	537	0.89
2	4	1.5e-12	1.1e-09	40.2	0.1	2	39	549	586	548	589	0.94
3	4	4.5e-17	3.4e-14	54.6	0.0	1	45	603	648	603	648	0.98
4	4	2.1e-18	1.6e-15	58.9	0.0	1	42	655	697	655	700	0.96

Sequence Information

Coding Sequence: ATGTCTGTGTCCATAGCTGGTCTTCTGCGGACAGCTgaacaattaaaaatcaaagGCCTTTGCGAAACAGCCGAAAGTGTTGATGATATCTCAGAGGCAGCAACAGCAACCATAACAGTGTCGGAGAATATAACACAGGCCGTTGTTGGGAATATAGTTAATCCAAGCCAGGTTGCACCAACATCGGCTACATCTACGCCGCAGCTGCGAAAATCTCGGGTCAGAAAACGCTCAAAGTCTCCGGACACgaatcagcagcagcaacagcaacaacaacagcagcagcagcaacaacaacagcaacaacaacaacaacaacagcatcagcaacaacaacaacaacagcagcagcagcagcagcatcaacaacagcaacatcaacaacagcaacagcatcaacatcatcaacaaATCAAATTCGAAAGTCAAAATTTGAATACAGCAGCAATAGTTAGCCTGCAACAGACATCATCGGGTAGTTATATACCAGTTTCTGGGGGTCAAGCGATAACAACGACAGCTGTTAGCCAACAAAATTCCGAGGACTCTGATTCGGATAAGCCAAGTGCTCAGAAAATTtgcaaaactgaaactgacaaTTCACCGACATCGAATAATGGCAGTGTAACTGTCGCACAGGGAACAGCAATTGTGACACAAATCGTAGTAGCACGCGACGGGAAAGATAAAAACATGACCAGCCTAGGAATGGGAATGAACGGTGGTATCCTCGGAGTACCAATGGGCTTTTTGGATTTTGCACCTGAACCACCAGCACCATCAGCAACACCTGTAACTGTGACTGAACATGTCGATTTGTCGTGCAATCCCAGTACAGATACCAGAGACTTATCAAACTCAACACCAAATGGTGGTGAAGTTCGTATTAAATTCGAGACTCTTCGTTCTTTAGATCCCACCGAAGCGCTCGATATTGACAATCATTTAGCTCAACATATGATCCAAAGGCTTGATCAATCACCAATGCATACGATCCACCATCAGTCGTCCACTGGCGATGAGAGTAACTCCAATCTAATTCAACATATTAAAAGTGAAGTGATTGAGgtgaaacaacagcaacagcatcatcatcagcaacaacagcaacagttgCATGCACAAGCTTTATCCCAGCAAGGACAAtctcaacagcagcaacaacagcaacatcagcaacaacagcagcatcaacagcaacaacaacagcaacagcaacaacatcagcagcatcaGGACATTTCCGGAGCAACTGTCATGGAAATCGATCCGAGTAATATAAAACATGAGCCAGGAATGATTATAACACCGGAAATTGTCACCATGATGGCAACTGGTCAAATGGATATATACTCAGATGCCAGCGAGGATTCATTGATGATTGCGAATGGTTCCCCAAATGACAATAATGAGCCACACTATACAAATTTGGACCAACCACATGATAAACAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAATATGAGTTTGACGAAAGCCTCTGTGACGTATGGTATCCCATCAACAACATTGTGGCAACGTGCCCATCGTATGGGCATTGAAACACCCAAAAAGGAAGGCGGTACTAAATCATGGAATGAAGATTCATTAAACAGCGCCTTGGAGGCATTACGAACTGGTCAAATATCAGCAAATAAAGCCTCTAAAGCATATGGTATTCCGTCCTCAACATTGTATAAAATTGCACGACGCGAAGGTATACGACTGGCGGCACCATTTAATGCAGCTCCAACAACATGGACGCCAGAAGATTTAGAACGTGCACTGGAAGCGATTCGTGCTGGTCATACATCCGTCCAAAAGGCCAGTTCTGAATTTGGTATACCAACAGGTACTCTTTATGGTCGCTGTAAACGTGAGGGTATTGAATTGTCACGTTCAAATCCAACACCATGGTCTGAGGATGCTATGaatgaagcattaaattctgttAGAGTGGGACAAATGTCTATCAATCAAGCGGCTATTCACTATAACCTACCCTATAGCTCATTATATGGTCGTTTTAAACGTGGTAAATACGATATAGCCAATACGAGTGCGTCATCAATAAATAATACATCAGGAAATACAAGTGGAAGCATTGAAATAATCGAACATAGTCCAGAGAATTCGCAACAATTCCAATATAGTCCAGCGCCGCAGTCTAATCATCaaactcagcaacaacaacagcagcagcaacagcaacaacagcagcaacaacaacaacagcagcagcagcagcagcagcaacatcaacaacaccaacagcaaccacaacacaTCCACCAACATGTTGTACACATTCAACAACAAACCCCACAACAtcatcaccaacaacaacatatcCAACAACAAGATGTTGTTACATCAACAAGTCAGGTTCACACCCAAGCTGGACAAATCCAACAGATTTACCACCATCACAGTACCCCTGAGAGAAGTTGA
Protein Sequence: MSVSIAGLLRTAEQLKIKGLCETAESVDDISEAATATITVSENITQAVVGNIVNPSQVAPTSATSTPQLRKSRVRKRSKSPDTNQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQHQQQQHQQQQQHQHHQQIKFESQNLNTAAIVSLQQTSSGSYIPVSGGQAITTTAVSQQNSEDSDSDKPSAQKICKTETDNSPTSNNGSVTVAQGTAIVTQIVVARDGKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNSTPNGGEVRIKFETLRSLDPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKQQQQHHHQQQQQQLHAQALSQQGQSQQQQQQQHQQQQQHQQQQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGQMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPHDKQGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDIANTSASSINNTSGNTSGSIEIIEHSPENSQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQQQQQHQQHQQQPQHIHQHVVHIQQQTPQHHHQQQHIQQQDVVTSTSQVHTQAGQIQQIYHHHSTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00314183;
90% Identity: iTF_01542127;
80% Identity: -