Veme010056.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vollenhovia emeryi
Gene Symbol
Hr39
Assembly
GCA_000949405.1
Location
NW:205890-241020[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.035 1.2e+02 1.5 4.2 106 160 22 76 8 110 0.78
2 5 0.87 2.9e+03 -3.1 6.9 78 163 317 400 278 421 0.58
3 5 4 1.3e+04 -12.9 16.9 62 160 412 503 370 545 0.39
4 5 6e-08 0.0002 20.5 0.1 1 22 612 633 612 686 0.85
5 5 1.1e-70 3.8e-67 227.1 0.0 201 408 792 1001 737 1001 0.90

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGGCCAGGGCCCGGTTCGGACTCGGGTTGGTGGCCAGCCACGCAGACCTGGAAATCGTCGGCGGCCGCCTCGTCGTCGACGGCCACGTCGACTCCCACTTCGACGGCGGCGGGTTCAGCGTCCGTCTCTGTCTCCTGCCCCGCGTCCAGCTCGTCCTCGACGAGCTCTTCCACCTCGGCCGGCTCGTCCGCGACCTGCTGTCCCTCGTCCTGCATCGGCGTGTCCTGCACGATGAGCCCAAACCGTTCCGCGGAAACGGGGAAGAACGTGTCCGTCACCACTATTAACGTACCGACCAATCAAGAGATGCACGATGGTAAAGGAGTATGTAAATATCTCGGCGGACAGAATGGCGTGACGGTGTCGGTGGTATCGACCTCGGTACTGGGATGCGGAAACGCGAATGCCGTCCCGACGAGCGGGATCTGCACGAATACGGGGCCGCATAGTATCGGCATCGGAATCGGCGGCATCCTCGCCGCGAACGCGGCCGACATCGATGATCCCGAGGACAGCGACGGCGAGATCAGCAAGATTGACTTCAGAGGTGTCAATCTACGCtcgaagaagaaacgcgaCGTGTCGGGCAATCAGAATGGCGAGAAGATCGGCGACGGAGATGCAAATGGCGACGGCGGGGGATGCTGCGATGACAATTCGCAACAGCAGCCAGAGAGGCCTATGTCATGGGAGGGTGAACTTTCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGgACCATAATGAGGAAACGTCCATGGAGGGGGTTCAAGTGTGCAGCACGAGCCCTGGGCCCATGGAACAGAAGTTTCCTATCAAGTCGGAGCCGGATTTTCGATCTAGCTCAGGTTTCACAATAGGATCCTTTCACGATGGTGGGCTGCCTATGACGCACAATCAACaactgcagcagcagcagcagcaacaacaacagcgCGGTATTGAAAACTTCGAGCAGACTCAACAGAGCGATCTGCCGCTTCTCGTAGGCAAGCTTCTCGGCGGATACAACAACTCGACGCCAAATCATAGTCCTGTGCTCAATCCGCGACATCATCTAACTAAACACAGTCATACTAGATCGCAGGTGCAGTCACCGGACTCCGCCGTTCATTCTGCGTACAGTGTCTTCAGTTCACCGACACAGAGCCCGCACGCGGCACGGCATTCCGCCCTAGGAGCGGGTAGTCCGATACCCTCCTCGTCGTTGTCCCTCTCTCGACACAGCTTCAACAATTCGACTTCCTCGTTATCCCTGTCGCTGTCGCATTCGCTCTCGAGAAATAATTCCGACGCTTCCAGTAGCTGTTACAGCTACGGCTCGCTTAGCCCGCCCACGCATTCACCCGTCCAGCAGCCGAGACATCCGCATTCGCACTCGCAGCATCATCAGCATCAAGTGGCGCAGGGTAGTCCGCTGCACCTACCAGCCTCGTCCGCGGTCGCCGCACATCATTACTCGTCCTCTTCCGTGCCAGGCTCGGAACTGTCGCCGGACGGTCATCCCGTCGCGGAGGATCAGGAAGACTGTAGGATACCCTCGGCGCCGTCGGGTATCTCCACGAGGCAACAACTGATAAACAGCCCGTGCCCGATTTGCGGCGACAAGATAAGCGGCTTCCATTACGGCATCTTTTCGTGCGAATCGTGCAAGGGGTTCTTCAAGCGCACCGTCCAGAATCGCAAGAACTATGTGTGCCTTAGAGGCGCAGGCTGCCCGGTCACCGTGGCGACGAGGAAGAAGTGCCCGGCCTGCCGCTTCGACAAGTGCCTCAATATGGGTATGAAACTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGTAGAAGCACTTATCAATGTACCTACACTCTACCGGCAAATCTCGTTGGTAGTCCCGCCGGTGGTATGACCAGTGAAAAAATGACGACGGCGGGCAACTGCAGCCCGGCACCGGCCGGTAGCGAGCACCATTATTCCGCTAGGTATCATTCGAATCATTCTCACAAGATGCAAGTAGTACCTCAACTTTTGCAAGACATCATGGACGTGGAACATCTTTGGCATTATAACGACAATGATCGGACGAGCGGCGGTGGAGGGATACTCGGTGGGGCGAGGAGTAACGTTGGCGACAGTATGCTGCTCGGTGGATCCGGAAGTGGTCTGATGCCCGGCGGTACTGGAGCCGCGACCGGAAACAACGGAGGTGCGGTGGAATGTACGTCGAGTGACTCTACCAACGTCGACACTAACAGTAGGAGAGCAGAGACGGCGAGCCCTGCCGGCTCGGCCTCAACGGGGGCGTCTGATCAACATTCCACAAACGGCAATACCACCAACAATAGTAATTCTCAAATTGCCAGTAATTTCAATGGCAATTCAGCCCAGCATCCGGACTTTCTATCTAATCTGTGCAACATCGCGGATCATCGGCTTTATAAGATCGTCAAGTGGTGCAAGAGTCtgccattatttaaaaatatctcgatCGACGACCAAATCTGTTTGTTGATCAACTCTTGGTGCGAGCTACTGCTTTTCTCCTGCTGCTTTCGCAGCATGAACACTCCCGGTGAAATAAAAGTGTCTCTTGGCAAGTCGATTACTCTAGAGCAAGCCAGACAGCTTGGTTTAGCGACCTGCATCGAGAGGATGCTCGCTTTTACCAACAATCTGCGAAGACTGAAAGTAGACCGATACGAATATGTTGCAATGaagGTGATCGTGCTGTTAACGTCCGATACAAGCGAATTAAAGGAGCCCGAGAAGGTCAGAGCGTCTCAGGAAAAGGCCCTTCAAGCGCTGCAGCAATATACAATCGCGATGTATCCAGAAATGCCTGCCAAATTCGGTGAACTATTGCTGAGAATTCCAGATCTGCAAAGGACGTGTCAAGCAGGAAAAGAGTTGCTCAGTGCAAAACGCGCCGAGGGAGAAGGCAGCTCGTTTAACCTCTTAATGGAATTGTTGAGAGGAGACCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGSDSGWWPATQTWKSSAAASSSTATSTPTSTAAGSASVSVSCPASSSSSTSSSTSAGSSATCCPSSCIGVSCTMSPNRSAETGKNVSVTTINVPTNQEMHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNANAVPTSGICTNTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGEKIGDGDANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSSGFTIGSFHDGGLPMTHNQQLQQQQQQQQQRGIENFEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVQSPDSAVHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQHQVAQGSPLHLPASSAVAAHHYSSSSVPGSELSPDGHPVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMTSEKMTTAGNCSPAPAGSEHHYSARYHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRTSGGGGILGGARSNVGDSMLLGGSGSGLMPGGTGAATGNNGGAVECTSSDSTNVDTNSRRAETASPAGSASTGASDQHSTNGNTTNNSNSQIASNFNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMNTPGEIKVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLKVDRYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIAMYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01267641;
90% Identity
iTF_00885153;
80% Identity
iTF_01520259;