Veme009081.1
Basic Information
- Insect
- Vollenhovia emeryi
- Gene Symbol
- Ssb-c31a_1
- Assembly
- GCA_000949405.1
- Location
- NW:1609233-1610592[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.083 1.1e+03 -1.2 0.4 28 37 36 47 31 47 0.70 2 2 5.7e-29 7.7e-25 85.8 0.4 1 51 56 107 56 108 0.97
Sequence Information
- Coding Sequence
- ATGCCGAAGTCGAAAGAATATCTGTCTGACAGCGACGACAGCAGCAGCGAGgagGAAGTAAAGTCGAAGAAGAAAACGCCGAAGAGAGGCAGGGATGTAGATGATAAAGCGGCGAAAGACGAGACGAAACCAGAGAAGAAAGCAAAAACTGATGACGACAGTATTTGGGAGTTGGGTAACAATCGTCAAGTAAATGTAAGAAATTTCAAAGGCAAATATTACGTCGATATTCGAGAGATGTATTACGACAAGGATGGCGATTTAAAACCTGGGAAAAAAGGTATATGCTTAACTATGCCACAATGGCGAAAGTTCATGGAGGTTGTGGAAGAAGTGGATAAAGTAGCGAAGTCAAAGTGTTAA
- Protein Sequence
- MPKSKEYLSDSDDSSSEEEVKSKKKTPKRGRDVDDKAAKDETKPEKKAKTDDDSIWELGNNRQVNVRNFKGKYYVDIREMYYDKDGDLKPGKKGICLTMPQWRKFMEVVEEVDKVAKSKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01229030;
- 90% Identity
- -
- 80% Identity
- -