Veme001215.1
Basic Information
- Insect
- Vollenhovia emeryi
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_000949405.1
- Location
- NW:609086-614356[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-112 1.4e-108 362.3 35.6 1 300 29 331 29 331 0.96 2 3 0.0036 48 2.7 3.6 122 171 331 380 329 384 0.91 3 3 0.06 8.1e+02 -1.3 6.4 195 237 363 404 351 406 0.55
Sequence Information
- Coding Sequence
- ATGGAATCTGCCATTACTGGACGAAGGCGAACTGCTACACGGCATTCTGCGGAAGATCAAGCGCTTGATCAAATAGCCAAGGAGGCAGAAGCAAGACTGGCTGCTAGGAGACAGGCGAGAGCAGAAGCCAGAGAAATACGAATGCGGGAGTTAGAAAGACAACAGAAAGAGGCAGAGGAGAATGCTGATAAGGTTTACGACATGTGTGCAGCTGATGTAAATAGAACTATGAGAGTGACTCCGGATCCAGTGCGTACATCGCGACTTCTTACAAATTCCAACAATTTCCAATCGAGTCGTAGATCTTCAGAAGATTCGTTGGAAGACGCAGGATTAAGCAGAGATATAAGGCTGGAATTAAAGGAATTTGAGGAAAAGTTCAGAAAGGCAATGATAGCTAATGCTCAGCTAGACAATGAAAAGTCATCATATGCTTATCAAGTGGATTTATTAAAGGATAAATTCGAAGAATTAGAAGAAACCACTGCACAATTACGTAGAGAgttgagagagaaaaatcgaAATGTTGAGCAATTAAAACGGGTCAGTCAAAGAATGAAGGAAGATTTAGATATTTGCAAGGCGCAGTTACTAGAAAGAGATACACTTATACAAGAAAACGGTTTAGTCATTATTGACAATATGGAAAGCGAagatgaaaataatgaaaatgttgaaaatggATTGTGTCATAGAAAGAGGGTACTAGTCAGTACAGAAGCTGCAGAGTTATTAGAAACAGCTGGTACAGGTTCACtagaTCTTTTAGATATTCGACTGAGAAAGTTTGCTTCCGAGAAGAAGGAACTGCAAGATGAAATTCGCCATTTACGATTGGAGTTAGAAGAAACTAGAAATCGTGTGAGACCCGAAAAATCATCTGGTTCATTATTAGGTTATTTATCAGATAATGAGGATACTCAACGTGaagcaaataaattattggctgattataaatttaaattacaaaaagcGGAACAAGATATGTCAACGCTGCAAGCGACAGTAGCTAGATTAGAAAGTCAAGTAATTCGTTATAAATCAGCTGCAGAGGCATCTGAAAAAGCAGAGGATGAGTTGAAAGtagaaaaaaggaaattgcAAAGAGAAgtAAGAGAAACACAAAGTCGTGTAGAGGAATTGGAGACAGCAAACTCTCATCTACAAAGGAGGTTGGATAAACTTAAAAACGCTAAATCAGCTCTTTTAAAGGAGCTTTGA
- Protein Sequence
- MESAITGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADKVYDMCAADVNRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKFEELEETTAQLRRELREKNRNVEQLKRVSQRMKEDLDICKAQLLERDTLIQENGLVIIDNMESEDENNENVENGLCHRKRVLVSTEAAELLETAGTGSLDLLDIRLRKFASEKKELQDEIRHLRLELEETRNRVRPEKSSGSLLGYLSDNEDTQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQSRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01266881;
- 80% Identity
- -