Basic Information

Insect: Vespula pensylvanica
Gene Symbol: ZNF236
Assembly: GCA_014466175.1
Location: CM025340.1:2114717-2121307[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00012 0.0075 16.1 0.6 2 23 53 74 53 74 0.98

2 23 5.8e-07 3.5e-05 23.5 1.1 1 23 95 117 95 117 0.99

3 23 2.7e-05 0.0016 18.2 0.6 1 20 123 142 123 145 0.96

4 23 1.7e-05 0.001 18.8 0.6 1 23 151 174 151 174 0.95

5 23 0.0023 0.14 12.1 1.6 3 23 185 206 183 206 0.97

6 23 1.6e-06 9.6e-05 22.1 1.9 1 23 324 346 324 346 0.98

7 23 0.00011 0.0067 16.3 1.7 1 23 352 374 352 374 0.99

8 23 0.02 1.2 9.2 4.2 1 23 380 402 380 402 0.97

9 23 4e-06 0.00024 20.8 3.0 1 23 406 428 406 428 0.98

10 23 0.002 0.12 12.3 7.0 1 23 483 505 483 505 0.98

11 23 3.9e-05 0.0024 17.7 5.2 1 23 511 533 511 533 0.99

12 23 7.6e-06 0.00046 20.0 2.2 1 23 539 561 539 561 0.98

13 23 8.3e-05 0.005 16.7 7.2 1 23 567 589 567 589 0.98

14 23 0.028 1.7 8.7 1.0 2 23 964 985 963 985 0.96

15 23 0.00017 0.01 15.7 2.8 1 23 991 1013 991 1013 0.98

16 23 8.4e-05 0.0051 16.7 0.8 2 23 1020 1041 1019 1041 0.97

17 23 2.5e-08 1.5e-06 27.8 1.4 2 23 1139 1160 1138 1160 0.98

18 23 0.00025 0.015 15.2 4.6 1 23 1166 1188 1166 1188 0.99

19 23 0.00088 0.054 13.4 3.9 1 23 1194 1216 1194 1216 0.97

20 23 0.00036 0.022 14.7 3.2 1 23 1222 1244 1222 1244 0.98

21 23 3e-05 0.0018 18.1 0.3 3 23 1433 1453 1432 1453 0.98

22 23 2.9e-05 0.0017 18.1 3.6 1 23 1459 1481 1459 1481 0.98

23 23 0.0018 0.11 12.4 3.8 1 23 1487 1510 1487 1510 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00012	0.0075	16.1	0.6	2	23	53	74	53	74	0.98
2	23	5.8e-07	3.5e-05	23.5	1.1	1	23	95	117	95	117	0.99
3	23	2.7e-05	0.0016	18.2	0.6	1	20	123	142	123	145	0.96
4	23	1.7e-05	0.001	18.8	0.6	1	23	151	174	151	174	0.95
5	23	0.0023	0.14	12.1	1.6	3	23	185	206	183	206	0.97
6	23	1.6e-06	9.6e-05	22.1	1.9	1	23	324	346	324	346	0.98
7	23	0.00011	0.0067	16.3	1.7	1	23	352	374	352	374	0.99
8	23	0.02	1.2	9.2	4.2	1	23	380	402	380	402	0.97
9	23	4e-06	0.00024	20.8	3.0	1	23	406	428	406	428	0.98
10	23	0.002	0.12	12.3	7.0	1	23	483	505	483	505	0.98
11	23	3.9e-05	0.0024	17.7	5.2	1	23	511	533	511	533	0.99
12	23	7.6e-06	0.00046	20.0	2.2	1	23	539	561	539	561	0.98
13	23	8.3e-05	0.005	16.7	7.2	1	23	567	589	567	589	0.98
14	23	0.028	1.7	8.7	1.0	2	23	964	985	963	985	0.96
15	23	0.00017	0.01	15.7	2.8	1	23	991	1013	991	1013	0.98
16	23	8.4e-05	0.0051	16.7	0.8	2	23	1020	1041	1019	1041	0.97
17	23	2.5e-08	1.5e-06	27.8	1.4	2	23	1139	1160	1138	1160	0.98
18	23	0.00025	0.015	15.2	4.6	1	23	1166	1188	1166	1188	0.99
19	23	0.00088	0.054	13.4	3.9	1	23	1194	1216	1194	1216	0.97
20	23	0.00036	0.022	14.7	3.2	1	23	1222	1244	1222	1244	0.98
21	23	3e-05	0.0018	18.1	0.3	3	23	1433	1453	1432	1453	0.98
22	23	2.9e-05	0.0017	18.1	3.6	1	23	1459	1481	1459	1481	0.98
23	23	0.0018	0.11	12.4	3.8	1	23	1487	1510	1487	1510	0.94

Sequence Information

Coding Sequence: ATGTCGTTCGCCGTGGACTGCATCAATTTTGCTCTTCTACTGATCTGCTCTCGTGTCTTTCATCTCGCTCTTGGAATCGGTGCGCAGTATTATAAGGCTCAACTGGATGCACACTTAAAGTTACACGGTGAAAAATCATTAACGGAGGAAGTGCGAAAGTGTAAGCTTTGCAATAAACAATTTGTTCAGCCTGCTTTATATAGACTTCATATTCGTGAGCATTATAAGTTACGGACAAAGATAGTCAAGCAGACGAAAAAAGGAACGAAACATAAGATTATGTATAAGTGTACGATATGTTTGAAGTCGTTTCAAAAACCTAGTCAGCTAATGCGTCATATTAGAGTTCATACAGGAGAGAAGCCTTTTAAATGTACCGTATGTAGTCGAGCATTTACTCAGAAAGGTTCTCTACAAATTCATATGTGGCAACATGATGGTATCAGACCTCATATATGTACTCTTTGCAATGCTAGATTTAGTCAAAAAGGAAACCTAAATGCACACATTTTGAGGGTACACAGTGCTCCAGAAGGAGAATCCATATATGGATGTACTTATTGTCCTTGTATTTTTAAAAAGCTTGGCAGTCTTAATGGTCATATGAAAAGAATGCATTCGAATTTGGCAGAAGAAACAACATCAAAATGCGAAAGTTCTACAGAGGCTGATATGCGAGCTACGGTTGATAGTGTCATATCACAGCTAGCATCCTTGGAATCTGGCATTGCTAATGTAGCAAATTCTACTCAATCTGGAGCTACGACTGAAAATAGAAATGATATTTTACAAGAAGCGTTAAATAATAGTGGATTGCCTAGTAAAGAGAAAAGTTCTTCTAATGAAACAATAGACTCGAAAAAAGTAGAAGCAAAAACGACGTACGTTACGTTATTGGATAGAGCACCGGACGGTACCATGAGAAAATATTTAACAATAAAGCAGCGATGTATAGGAAATATACGATGGTATGCATGCTCTTTCTGTCACAAAGAATTTAAAAAGCCATCGGATTTAATACGTCATTTAAGAGTGCATACTCAAGAAAAACCATTTAAATGTTCTTATTGCTTTCGCTCATTTGCGTTAAAATCAACGATGATTGCACACGAACGTACTCACACCGGTACCAAGAAATATGCTTGTGGTTCGTGCGATAAAACTTTCGCGTGTCATAGTAGTCTTACCACTCATACGAGATTACATACAAAGCCACACAAATGCACTCTATGTGACAAATCGTTTAGTTCTAGCGCTGTTTTAAAAAGTCACATGAAAAGTCATTCAAAAGGAAAATCAAATCTCTCGCCAGAAGCAGAAAGTCTAGTGCCACAAATCGTTTTACAGGAACCGTTAGTTATTAGCGATGCGGGTAATAAGATCAGCGTGGCGCATGTACAATCAAAACAAAAACATGTTTATGACAGTGCAGATGTTGCAAGACCACACAAATGTTGGGTATGTCATGCGGCATTTAGGAAAATTAGTCATTTAAAGCAACACTATCGTCGGCATACTGGAGAACGTCCTTTCAAATGCACCAAGTGCGATAGAAGATTTACGTCTAATAGCGTTCTTAAGTCACATTTGCATACGCACGATGATGCAAGACCATACAGTTGTACTGTATGTAATACTAAGTTTTCTACTCAGAGCAGTATGAAGAGACATTTGGTGACTCACAGTAACAAAAGACCATTCATGTGTCCTTATTGTCATAAAACATTCAAAACTTCTGTTAATTGCAGAAAACATATGAAGATACATAAACATGAACTTGCACAAAGACAATTAGAACAACAGAAGAAACAACAACAAATTAAGGATGTACCAAAGACATTGAATAAGGATAAGGGAACTATTTTACCAGAGAATATAGCACTGTCAGAGGAAATGGAAGTATCTTTCCAACCACAAATGGCACCTGATTTTGCATTAGCCTTTTCGGATCAATTTCAAAATATAACGGAAAAAGAAAAAACGTTTTTAACAACGGACAGAACACAACCGGTTATTAATTCAAATTTATCTACAAATTTGTCTACGATAGAAACAAATAATTTAGCGACATCGCAAACTTTACATACCGATGAAACAGCCACTATTACAATTCCTAATTATACAGGGGATCAATCGCTTACGCCTGAAAGTATACGCGAGATAGAAGAAACTTTCAATCAACAACTGTTTAATATTGGAATGAATCTTGGTTTGGGAAGTAATCTCTCAAGACCGATAGATGATGCAAACACAAATACTCTTGAACAAAGGGAACAACCTGTATTAAATATTATTTATGACAATAATAAAAATTTAGAGTCATCCGCAAATACAATGTTCACATCACAATTTGATTCATTTGATATTAGTCAGATTACGTTACAACCTGATACCGAAATAGACATTGGACTGAATACAGAAAATTCTGCAAATATGGCAAATATTTTAACTAGATCTATACAAGAGAGACAAGAACTAAGCACTATCGCTATTGAAAATAATACAAATGACAATCATATTAAAACACCAAAACAATTAATGATATTAGGTTCCAAACAAACTGGATCTGATGCTTTAAAACTGCCACAGTCTTGTTCGAGATATCCGAAAGTTATAGCTAAAGCGGATACGACAGATACAACGGATATCGAAATTATGAATCTAACGAACAGTGCAGAAATACAAATGATAAATGATTGTAATAAAAAACATCAAGAAAACATCGTATGTCACGAGCATGGAAATAATACTTTACATTTAAAATGCGATTTAAACAACGAAAATTTTCAAGATACGCTACAATTAAATGCTCATTCAAAATTACATTCCCCGTCGAACATCATTTACGCGGATATTAATGGATGCAGCATTCAATGTGACTCTTTACTTCAGTGTCATATATGCAGTGAACAAGGCTTTACTACAGAAGAATTAAAGGAACATTTACAAACTCACCGTGGAACGAAAGGCTTCCAATGTACAGAATGTTCTCTTAAATTTTGTACTAGTGGTGGACTTAGCAGACATTTAAAATTACATAAAAATAAAGAACAATGGAAGTGTACAATCTGTCAACAAGTTTTTGTTAGCAAAGTCCAATTGAGATCTCATAATAAAATGCATGATAATAATCTTAATGCAAGCTCGTTAGAATCAGACAAATCGCAGAAAGAAAATATTTCTATCAATAAAAGTCTTTCCATTGATTCTACTTCAAATAATAAAATTTCTTTTGATAGTAAAACTCTATCAAATAACTCCATCAAATTGGATGAAAAGATTTCTTTAGATGATAAAATGGGCACTGATTCGTCAGTATCAGAAAAAGTTCTTTTAGACACGGTAGCAGAAAAAAAGATCATGGATCAAATAGATGGTAGTGTAGAAAAAAAAGAAACAAAACAGTATATCAATAAATGTAAGTACTGTCCGAAAACATTTCGCAAACCAAGCGATCTTATAAGACATATTCGGACACATACCGGTGAACGACCGTACACGTGCGATCATTGCAGTAAAAGTTTTGCAGTGAAGTGTACATTGGATTCTCATATGAAAGTTCATAGTGGCAAGAAGACGTTTTGTTGTCATGTTTGCAATAGTTTATTTGCTACAAAGGGTAGTTTAAAAGTTCATATGCGATTACATACTGGTTCTAAACCATTTAGATGCCAGATTTGTGATTTAAGATTTCGAACTTCAGGTCATAGAAAAGTACATTTATTGAAACATGTGAGACAGCACAAAGGTATCACTAAGCGAAAACAAAAGCACATGAAAGTTTCTGCTGTAGCTGAAGCAAGTCTTGATTTAGAAAAATCGGTTGAAAGTGTAGTGCATTTAGTAACAACTGATAATGATGTATCTACATCGTCAAATGTTGATTACTCAAACCTTGACGCAATCAGCATTGACACCAATAATTTAGTCAATCAGATTAATTTGAATAGCGATACAATGATATTGAATAATAATTCAATTGTGTCATTAAATGAGAATAATCAATTAGTAGCAAATTTGCATTTCTTATTAGCAAATGGATTTAATGAGACTAAATTATCAGAATTCGTTAATGGTGCACCTATACAGGAATCTTATATTGACACAGGTACTAAACACGTCGTTATTACAAATGAAACATCAACAAGGACAGCCCTGCCAACTACCCATGTTTCAACAGAGCCGAATACTGATATAAGTATAACACAATTAGAATATACAAATCCTGCAACGATTAAAACAGAAGAAACAATAAAGAAGCAAACAAATAAGAGCAATTCATCAAAACAGAGAGCATGTGATATTTGTGGAAAAACGTTTATGAAGCCATATCAAGTAGAAAGACATAAACGAATTCACACAGGTGAACGTCCATTTAAGTGCGAATTATGTACCAAATCATTTGCTCAAAAGGCAACATTACAAATGCATCAAAAACATCATACAGGTGATCGACCACACGCTTGTCCATGCTGCGAATTTACTTTTTCTCAAAGAGGAAATTTACGAACACACTTAAGACGTGTTCATCGATTGGATCTTATCAGTGCTAAAAAGTTGAAAACAAGTCAACAAGTTTTAAGTGCTAAACTAATACAAAATAATATAGGTGAAACAAAGATTCTAAGTTTAGATGATATTGCCTTTGTCCAGTTTGTAAAATAA
Protein Sequence: MSFAVDCINFALLLICSRVFHLALGIGAQYYKAQLDAHLKLHGEKSLTEEVRKCKLCNKQFVQPALYRLHIREHYKLRTKIVKQTKKGTKHKIMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCSRAFTQKGSLQIHMWQHDGIRPHICTLCNARFSQKGNLNAHILRVHSAPEGESIYGCTYCPCIFKKLGSLNGHMKRMHSNLAEETTSKCESSTEADMRATVDSVISQLASLESGIANVANSTQSGATTENRNDILQEALNNSGLPSKEKSSSNETIDSKKVEAKTTYVTLLDRAPDGTMRKYLTIKQRCIGNIRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCSYCFRSFALKSTMIAHERTHTGTKKYACGSCDKTFACHSSLTTHTRLHTKPHKCTLCDKSFSSSAVLKSHMKSHSKGKSNLSPEAESLVPQIVLQEPLVISDAGNKISVAHVQSKQKHVYDSADVARPHKCWVCHAAFRKISHLKQHYRRHTGERPFKCTKCDRRFTSNSVLKSHLHTHDDARPYSCTVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQRQLEQQKKQQQIKDVPKTLNKDKGTILPENIALSEEMEVSFQPQMAPDFALAFSDQFQNITEKEKTFLTTDRTQPVINSNLSTNLSTIETNNLATSQTLHTDETATITIPNYTGDQSLTPESIREIEETFNQQLFNIGMNLGLGSNLSRPIDDANTNTLEQREQPVLNIIYDNNKNLESSANTMFTSQFDSFDISQITLQPDTEIDIGLNTENSANMANILTRSIQERQELSTIAIENNTNDNHIKTPKQLMILGSKQTGSDALKLPQSCSRYPKVIAKADTTDTTDIEIMNLTNSAEIQMINDCNKKHQENIVCHEHGNNTLHLKCDLNNENFQDTLQLNAHSKLHSPSNIIYADINGCSIQCDSLLQCHICSEQGFTTEELKEHLQTHRGTKGFQCTECSLKFCTSGGLSRHLKLHKNKEQWKCTICQQVFVSKVQLRSHNKMHDNNLNASSLESDKSQKENISINKSLSIDSTSNNKISFDSKTLSNNSIKLDEKISLDDKMGTDSSVSEKVLLDTVAEKKIMDQIDGSVEKKETKQYINKCKYCPKTFRKPSDLIRHIRTHTGERPYTCDHCSKSFAVKCTLDSHMKVHSGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFRCQICDLRFRTSGHRKVHLLKHVRQHKGITKRKQKHMKVSAVAEASLDLEKSVESVVHLVTTDNDVSTSSNVDYSNLDAISIDTNNLVNQINLNSDTMILNNNSIVSLNENNQLVANLHFLLANGFNETKLSEFVNGAPIQESYIDTGTKHVVITNETSTRTALPTTHVSTEPNTDISITQLEYTNPATIKTEETIKKQTNKSNSSKQRACDICGKTFMKPYQVERHKRIHTGERPFKCELCTKSFAQKATLQMHQKHHTGDRPHACPCCEFTFSQRGNLRTHLRRVHRLDLISAKKLKTSQQVLSAKLIQNNIGETKILSLDDIAFVQFVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01513614;
90% Identity: iTF_01512955;
80% Identity: -