Basic Information

Insect: Vespula germanica
Gene Symbol: ZNF236
Assembly: GCA_905340365.1
Location: HG996532.1:2154042-2167953[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00015 0.009 16.1 1.0 2 23 168 189 167 189 0.96

2 27 0.00041 0.025 14.7 1.1 1 23 195 217 195 217 0.98

3 27 5.2e-06 0.00032 20.7 0.4 2 23 223 244 223 244 0.98

4 27 0.026 1.6 9.1 0.1 3 23 252 272 250 272 0.96

5 27 0.00017 0.011 15.9 0.6 2 23 283 304 283 304 0.98

6 27 8.2e-07 5e-05 23.2 1.1 1 23 325 347 325 347 0.99

7 27 3.8e-05 0.0023 18.0 0.6 1 20 353 372 353 375 0.96

8 27 2.4e-05 0.0015 18.6 0.6 1 23 381 404 381 404 0.95

9 27 0.0033 0.2 11.9 1.6 3 23 415 436 413 436 0.97

10 27 2.2e-06 0.00014 21.9 1.9 1 23 554 576 554 576 0.98

11 27 0.00015 0.0095 16.1 1.7 1 23 582 604 582 604 0.99

12 27 0.028 1.7 9.0 4.2 1 23 610 632 610 632 0.97

13 27 5.7e-06 0.00035 20.6 3.0 1 23 636 658 636 658 0.98

14 27 0.0029 0.17 12.1 7.0 1 23 713 735 713 735 0.98

15 27 5.5e-05 0.0034 17.5 5.2 1 23 741 763 741 763 0.99

16 27 1.1e-05 0.00065 19.7 2.2 1 23 769 791 769 791 0.98

17 27 0.00012 0.0072 16.4 7.2 1 23 797 819 797 819 0.98

18 27 0.04 2.5 8.5 1.0 2 23 1194 1215 1193 1215 0.96

19 27 0.00024 0.015 15.5 2.8 1 23 1221 1243 1221 1243 0.98

20 27 7e-05 0.0043 17.1 0.7 2 23 1250 1271 1249 1271 0.97

21 27 3.5e-08 2.1e-06 27.5 1.4 2 23 1369 1390 1368 1390 0.98

22 27 0.00036 0.022 14.9 4.6 1 23 1396 1418 1396 1418 0.99

23 27 0.0012 0.077 13.2 3.9 1 23 1424 1446 1424 1446 0.97

24 27 0.00051 0.031 14.4 3.2 1 23 1452 1474 1452 1474 0.98

25 27 4.3e-05 0.0026 17.8 0.3 3 23 1709 1729 1708 1729 0.98

26 27 4e-05 0.0025 17.9 3.6 1 23 1735 1757 1735 1757 0.98

27 27 0.0026 0.16 12.2 3.8 1 23 1763 1786 1763 1786 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00015	0.009	16.1	1.0	2	23	168	189	167	189	0.96
2	27	0.00041	0.025	14.7	1.1	1	23	195	217	195	217	0.98
3	27	5.2e-06	0.00032	20.7	0.4	2	23	223	244	223	244	0.98
4	27	0.026	1.6	9.1	0.1	3	23	252	272	250	272	0.96
5	27	0.00017	0.011	15.9	0.6	2	23	283	304	283	304	0.98
6	27	8.2e-07	5e-05	23.2	1.1	1	23	325	347	325	347	0.99
7	27	3.8e-05	0.0023	18.0	0.6	1	20	353	372	353	375	0.96
8	27	2.4e-05	0.0015	18.6	0.6	1	23	381	404	381	404	0.95
9	27	0.0033	0.2	11.9	1.6	3	23	415	436	413	436	0.97
10	27	2.2e-06	0.00014	21.9	1.9	1	23	554	576	554	576	0.98
11	27	0.00015	0.0095	16.1	1.7	1	23	582	604	582	604	0.99
12	27	0.028	1.7	9.0	4.2	1	23	610	632	610	632	0.97
13	27	5.7e-06	0.00035	20.6	3.0	1	23	636	658	636	658	0.98
14	27	0.0029	0.17	12.1	7.0	1	23	713	735	713	735	0.98
15	27	5.5e-05	0.0034	17.5	5.2	1	23	741	763	741	763	0.99
16	27	1.1e-05	0.00065	19.7	2.2	1	23	769	791	769	791	0.98
17	27	0.00012	0.0072	16.4	7.2	1	23	797	819	797	819	0.98
18	27	0.04	2.5	8.5	1.0	2	23	1194	1215	1193	1215	0.96
19	27	0.00024	0.015	15.5	2.8	1	23	1221	1243	1221	1243	0.98
20	27	7e-05	0.0043	17.1	0.7	2	23	1250	1271	1249	1271	0.97
21	27	3.5e-08	2.1e-06	27.5	1.4	2	23	1369	1390	1368	1390	0.98
22	27	0.00036	0.022	14.9	4.6	1	23	1396	1418	1396	1418	0.99
23	27	0.0012	0.077	13.2	3.9	1	23	1424	1446	1424	1446	0.97
24	27	0.00051	0.031	14.4	3.2	1	23	1452	1474	1452	1474	0.98
25	27	4.3e-05	0.0026	17.8	0.3	3	23	1709	1729	1708	1729	0.98
26	27	4e-05	0.0025	17.9	3.6	1	23	1735	1757	1735	1757	0.98
27	27	0.0026	0.16	12.2	3.8	1	23	1763	1786	1763	1786	0.94

Sequence Information

Coding Sequence: ATGTTGACAGAACAAATTGTAGTTTCTGAATCATCTACCGGCGATACATTACCATTAGGATTTATAACCGCTGAAGATGGTCGAACTCTTTTAGCAGTAGCAgAACACGAAGATGGTATCTTAGCAATTATGTCAACACCTGTAGCATTTATGCAgcagaataatataatttcaccATCATTAGTTAAGACTATAGATGGAAATATGATTGTACATCCTcctatttttcaaataagtaTAGAAGGCATTGCTGGAATTCAACAAGGTGCTATATTACCAATACAAACATTAGAAGCAGTTCCTACTGTTATGGAAGATGTACCAAGTTGTGTACAGTCCATAGTTCCTACATCAACAGATTTAGcaataaataacaaagaacaaattttttctcccgAGTTTCATACAACACAATTTCCTGttcagaaaaataatactaaaCGTAATCCTGGCAGACCAAGGAAAAATGAAGTCATCTTGTCTCATAGCATAGACGATATGAAATGCAATGTTTGTGGGCAAGACTTTGATAAACAATCTCTATATCGGAAACATATGGATCAGCACGCAGAGGAGAAACCACATCGTTGTCCAAAATGTTCTGCATCCTTTAATATTCCGACGAATTTCACGCTTCACATGGCAACGCATAATACTGGTGAACCAAAATGTCCTGAATGTGGTAGAAAATTTGCTAGAATGGCCAGTTTAAAATCTCACATGATGTTGCatgtgaaagaagaaaatcttttttgtaCGGAGTGCGAAGATGCCTTTCCAACAAAAgcTCAACTGGATGCACACTTAAAGTTACACGGTGAAAAATCATTAACGGAAGAAGTGCGAAAGTGTAAGCTTTgcaataaacaatttgttcaGCCTGCTTTATATAGACTTCATATTCGTGAGCATTATAAGtTACGGACAAAGATAGTCAAGCAgacgaaaaaaggaacgaaacaTAAGATTATGTATAAGTGTACGATATGTTTGAAGTCGTTTCAAAAACCTAGTCAGCTAATGCGTCATATTAGAGTTCATACAGGAGAGAAGCCTTTTAAAtGTACCGTATGTAGTCGAGCATTTACTCAGAAAGGTTCTCTACAAATTCATATGTGGCAACATGATGGTATCAGACCTCATATATGTACTCTTTGCAATGCTAGATTTAGTCAAAaaggAAACCTAAATGCACACATTTTGAGGGTACACAGTGCTCCAGAAGGAGAATCCATATATGGATGTACTTATTGTCcttgtatttttaaaaagcttGGCAGTCTTAATGGTCATATGAAAAGAATGCATTCGAATTTGGcagaaGAAACAACATCAAAATGCGAAAGTTCTACAGAGGCTGATATGCGAGCTACGGTTGATAGTGTCATATCACAGCTAGCATCCTTGGAATCTGGCATTGCTAATGTAGCAAATTCTACTCAATCTGGAGCTACGactgaaaatagaaatgatattttacaaGAAGCGTTAAATAATAGTGGATTGCCtagtaaagagaaaagttcTTCTAAtgAAACAATAGACTCGAAAAAAGTAGAAGCAAAAACGACGTACGTTACGTTATTGGATAGAGCACCGGACGGTACCATGAGaaaatatttaacaataaagcAGCGATGTATAGGAAATATACGATGGTATGCATGCTCTTTCTGTCacaaagaatttaaaaaaccATCGGATTTAATACGTCATTTAAGAGTGCATACTCAAGAAAAACCATTTAAAtgTTCTTATTGCTTTCGCTCATTTGCGTTAAAATCAACGATGATTGCACACGAACGTACTCACACCGGTACCAAGAAATATGCCTGTGGTTCGTGCGATAAAACTTTCGCCTGTCATAGTAGTCTTACCACTCATACGagATTACATACAAAGCCACACAAATGCACTCTATGTGATAAATCGTTTAGTTCTAGCGCTGTTTTAAAAAGTCACATGAAAAGTCATTCAAAAGGAAAATCAAATCTCTCGCCAGAAGCAGAAAGTCTAGTGCCACAAATCGTTTTACAGGAACCGTTAGTTATTAGCGATGCGGGTAATAAGATCAGCGTGGCGCATGTAcaatcaaaacaaaaacatgTTTATGACAGTGCAGATGTTGCAAGACCACACAAATGTTGGGTATGTCATGCGGCATTTAGGAAAATTAGTCATTTAAAGCAACACTATCGTCGGCATACTGGAGAACGTCCTTTCAAATGCACCAAGTGCGATAGAAGATTTACGTCTAATAGCGTTCTTAAGTCACATTTGCATACGCACGATGATGCAAGACCATACAGTTGTACTGTATGTAATACTAAGTTTTCTACTCAGAGCAGTATGAAGAGACATTTGGTGACTCACAGTAACAAAAGACCATTCATGTGTCCTTATTGTCATAAAACATTCAAAACTTCTGTTAATTGCAGAAAACATATGAAGATACATAAACATGAACTTGCACAAAGACAATTAGAACAACAgaagaaacaacaacaaattaAGGATGTACCAAAGACATTGAATAAGGATAAGGGAACTATTTTACCAGAGAATATAGCACTGTCAGAGGAGATGGAAGTATCTTTCCAACCACAAATGGCACCTGATTTTGCATTAGCCTTTTCGGatcaatttcaaaatataacggaaaaagaaaaaacgttttTAACAACGGACAGAACACAACCGGTtattaattcaaatttatCTACAAATTTGTCTACgatagaaacaaataatttagCGACATCACAAACTTTACATACCGATGAAACAGCCACTATTACAATTCCTAATTATACAGGGGATCAATCGCTTACGCCTGAAAGTATACGCGAGATAGAAGAAACTTTCAATCAACAACTGTTTAATATTGGAATGAATCTTGGTTTGGGAAGTAATCTCTCAAGACCGATAGATGATGCAAACACAAATACTCTTGAACAAAGGGAACAAcctgtattaaatattatttatgacaataacaaaaatttagaGTCATCCGCAAATACAATGTTCACATCACAATTTGATTCATTTGATATTAGTCAGATTACGTTACAACCTGATACCGAAATAGACATTGGACTGAATACAGAAAATTCTGCAAATATGGCAAATATTTTAACTAGATCTATACAAGAGAGACAAGAACTAAGCACTATCGctatcgaaaataatacaaatgacAATCATATTAAAACGCCAAAACAATTAATGATATTGGGTTCCAAACAAACTGGATCTGATGCTTTAAAACTGCCACAGTCTTGTTCGAGATATCCGAAAGTTATAGCTAAAGCGGATACGACAGATACAACGGATATCGAAATTATGAATCTAACGAACAGTGCAGAAATACAAATGATAAatgattgtaataaaaaacatcAAGAAAACATCGTATGTCACGAGCATGGAAATAATACTTTACATTTAAAatgcGATTTAAACAACGAAAATTTTCAAGATACACTACAATTAAATGCTCATTCAAAATTACATTCCCCGTCGAACATCATTTACGCGGATATTAATGGATGCAGCATTCAATGTGACTCTTTACTTCAGTGTCATATATGCAGTGAACAAGGCTTTACTACAGAAGAATTAAAGGAACATTTACAAACTCACCGTGGAACGAAAGGCTTCCAATGTACAGAATGTTCTCTTAAATTTTGTACTAGTGGTGGACTTAGCAGACATTTAAAAttgcataaaaataaagaacaATGGAAGTGTACAATCTGTCAACAAGTTTTTGTTAGCAAAGCCCAATTGAGATCTCATAATAAAATGCATGATAATAATCTTAATGCAAGCTCATTAGAATCAGATAAATcgcagaaagaaaatatttctatcaatAAAACTCTTTCCATTGATTCTacttcaaataataaaatttcttttgatagTAAAACTCTATCAAATAACTCCATCAAATTGGATGAAAAGATTTCTTTAGATGATAAAATGGGCACTGATTCGTCAGTATCAGAAAAAGTTCTTTTAGACACGGTAgcagaaaaaaagatcatggATCAAATAGAtGGtagtgtagaaaaaaaagaaacaaaacagtATATCAATAAATGTAAGTACTGTCCGAAAACATTTCGCAAACCAAGCGATCTTATAAGACATATTCGGACACATACCGGTGAACGACCGTACACGTGCGATCATTGCAGTAAAAGCTTTGCAGTGAAGTGTACATTGGATTCTCATATGAAAGTTCATAGCGGCAAGAAGACGTTTTGTTGTCATGTTTGCAATAGTTTATTTGCTACAAAGGGTAGTTTAAAAGTTCATATGCGATTACATACTGgTTCTAAACCATTTAGATGCCAGATTTGTGATTTAAGATTTCGAACTTCAGGTCATAGAAAAGTACATTTATTGAAACATGTGAGACAGCACAAAGGTATCACTAAGCGAAAACAAAAGCACATGAAAGTTTCTGCTGTAGCTGAAGCAAGCCTTGATTTAGAAAAATCGGTTGAAAGTGTAGTGCATTTAGTAACAACAGATAATGATGTATCTACATCGTCAAACGTTGATTACTCAAACCTTGACGCAATCAGCATTGACACTAATAATTTAGTCAATCAGATTAATTTGAATAGCGATACAAtgatattgaataataattcaattgtGTCATTAAATGAGAATAATCAATTAGTAGCAAATTTGCATTTCTTATTAGCAAATGGATTTGTTACTATTCAAACGGATGATACCTCGCCACCAAcagtaacagcagcagcagcagcaccgGTAGCAGCACCAACAACACCAgtaccgccaccaccaccaccactagtACCTATTTCTGATGCAAATATTATTCAGAATGAGACTAAATTATCAGAATTCGTTAATGGTGCACCTATACAGGAATCTTATATTGACACAGGTACTAAACACGTCGTTATTACAAATGAAACATCGACAAGGACAGCCCTTCCAACTACCCATGTTTCAACAGAGCCGAATACTGATATAAGTATAACACAGTTAGAATACACAAATCCTGCAACAATTAAAACAGAAGAAACTAAAATAAAGAAGCAAACAAATAAGAGCAATTCATCAAAACAGAGAGCATGTGATATTTGTGGAAAAACGTTTATGAAGCCATATCAAGTAGAAAGACATAAACGAATTCACACAGGTGAACGTCCATTTAAGTGCGAATTATGTACCAAATCATTTGCTCAAAAGGCAACATTACAAATGCATCAAAAACATCATACAGGTGATCGACCACACGCTTGCCCATGCTGcgaatttactttttctcaaaGAGGAAATTTACGAACACACTTAAGACGTGTTCATCGATTGGATCTTATCAGTGCTAAAAAGTTGAAAACAAGTCAACAAGTTTTAAGTGCTAAactaatacaaaataatataggtGAAACAAAGATTCTAAGTTTAGATGATATTGCCTTTGTCcagtttgtaaaataa
Protein Sequence: MLTEQIVVSESSTGDTLPLGFITAEDGRTLLAVAEHEDGILAIMSTPVAFMQQNNIISPSLVKTIDGNMIVHPPIFQISIEGIAGIQQGAILPIQTLEAVPTVMEDVPSCVQSIVPTSTDLAINNKEQIFSPEFHTTQFPVQKNNTKRNPGRPRKNEVILSHSIDDMKCNVCGQDFDKQSLYRKHMDQHAEEKPHRCPKCSASFNIPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHMMLHVKEENLFCTECEDAFPTKAQLDAHLKLHGEKSLTEEVRKCKLCNKQFVQPALYRLHIREHYKLRTKIVKQTKKGTKHKIMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCSRAFTQKGSLQIHMWQHDGIRPHICTLCNARFSQKGNLNAHILRVHSAPEGESIYGCTYCPCIFKKLGSLNGHMKRMHSNLAEETTSKCESSTEADMRATVDSVISQLASLESGIANVANSTQSGATTENRNDILQEALNNSGLPSKEKSSSNETIDSKKVEAKTTYVTLLDRAPDGTMRKYLTIKQRCIGNIRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCSYCFRSFALKSTMIAHERTHTGTKKYACGSCDKTFACHSSLTTHTRLHTKPHKCTLCDKSFSSSAVLKSHMKSHSKGKSNLSPEAESLVPQIVLQEPLVISDAGNKISVAHVQSKQKHVYDSADVARPHKCWVCHAAFRKISHLKQHYRRHTGERPFKCTKCDRRFTSNSVLKSHLHTHDDARPYSCTVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQRQLEQQKKQQQIKDVPKTLNKDKGTILPENIALSEEMEVSFQPQMAPDFALAFSDQFQNITEKEKTFLTTDRTQPVINSNLSTNLSTIETNNLATSQTLHTDETATITIPNYTGDQSLTPESIREIEETFNQQLFNIGMNLGLGSNLSRPIDDANTNTLEQREQPVLNIIYDNNKNLESSANTMFTSQFDSFDISQITLQPDTEIDIGLNTENSANMANILTRSIQERQELSTIAIENNTNDNHIKTPKQLMILGSKQTGSDALKLPQSCSRYPKVIAKADTTDTTDIEIMNLTNSAEIQMINDCNKKHQENIVCHEHGNNTLHLKCDLNNENFQDTLQLNAHSKLHSPSNIIYADINGCSIQCDSLLQCHICSEQGFTTEELKEHLQTHRGTKGFQCTECSLKFCTSGGLSRHLKLHKNKEQWKCTICQQVFVSKAQLRSHNKMHDNNLNASSLESDKSQKENISINKTLSIDSTSNNKISFDSKTLSNNSIKLDEKISLDDKMGTDSSVSEKVLLDTVAEKKIMDQIDGSVEKKETKQYINKCKYCPKTFRKPSDLIRHIRTHTGERPYTCDHCSKSFAVKCTLDSHMKVHSGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFRCQICDLRFRTSGHRKVHLLKHVRQHKGITKRKQKHMKVSAVAEASLDLEKSVESVVHLVTTDNDVSTSSNVDYSNLDAISIDTNNLVNQINLNSDTMILNNNSIVSLNENNQLVANLHFLLANGFVTIQTDDTSPPTVTAAAAAPVAAPTTPVPPPPPPLVPISDANIIQNETKLSEFVNGAPIQESYIDTGTKHVVITNETSTRTALPTTHVSTEPNTDISITQLEYTNPATIKTEETKIKKQTNKSNSSKQRACDICGKTFMKPYQVERHKRIHTGERPFKCELCTKSFAQKATLQMHQKHHTGDRPHACPCCEFTFSQRGNLRTHLRRVHRLDLISAKKLKTSQQVLSAKLIQNNIGETKILSLDDIAFVQFVK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01514293; iTF_01514950; iTF_01233800; iTF_01235170; iTF_01234490; iTF_01233135; iTF_01512955; iTF_01512317; iTF_01090130;
90% Identity: iTF_01512955;
80% Identity: -