Vpen011119.1
Basic Information
- Insect
- Vespula pensylvanica
- Gene Symbol
- tfip11
- Assembly
- GCA_014466175.1
- Location
- CM025338.1:2040383-2043633[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-98 1.9e-94 315.8 18.0 1 275 399 666 399 666 0.98 2 2 0.00046 2.8 6.9 0.4 242 273 678 709 669 711 0.89
Sequence Information
- Coding Sequence
- ATGTCAGAAGACGAAGTAGAAAGTTTCGAGATCTCCTATGATTTTGAAAATGAATTTAATATTAATCGTCCTAGACGAAAACTTTCTAAAAAACAGCAGATGCTCGGTATCTGGGCAGATGATAGCGACGAGGATGAACTTTCTGCGCGACCTTCTTTCAAAACATATAACAAAGGTCCAAAGAATTATACGGTTCCGGTTAATTTTGTTGCCGGAGGTATTCAACAAGCTGGTAAACCAGCAGAAGAAAAAGAGGATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGAGATGGGGAGGGATATTTTAATAGTTCAAGTTCAGAGGATGAAAAACCAAGTAATTCCAAACAACGTACATCGTTTTCATTGAACGTAGAAGGAGATATTGCTGGATTACGTAAAAAGAGATATCAAGTAAATCCTTCATTCATGAAAAGTGGAGTAGGCAGTTGGGAAGTACATACAAAAGGAATTGGAGCTAAACTGTTACTACAGATGGGTTTTGAACCTGGCAAAGGATTGGGAAAGCAATTACAAGGAATAAGTGCACCAGTAGAAGCTCATTTTAGAAAAGGTAGAGGTGCTATTGGTGCGTACGGTCCGGAGAAAGGACCAAAAATGGTTGAAAAAAGAAAAGAAGAAGCAGAGGATGCAAAGGATTCTAAGTCTAAAGTATCTCAATGGCGAAAAGGGGATAGTATTAACAATAAAAAAAAAGTCAAATATTCATATCGGAGTGTTGATCAAGTTTTAGAAGATGGAAAATTAAAACCAAATAGAAAACTTCCACTTTCGAGTGAAATGAGCAGAGTGAAAGTTATAGATATGACAGGACCAGAACAAAGAATTTTAAGCGGTTATCATGCAATAGCCAGTGGCCAACAATATCCCGATGAAACTATTCCAAGTGTGAATAAAAAGGACAAAATAAATTTTTCTTTGCCAGAATTACAGCATAATTTAAACTTGCTTGTAGATATGTGTGAACAAGATATTATACAGAATGATAGAAGAACAAGACACTTGAGCGATAGAGTAATAGCGTTAGAAGCGGAGAAAAGAAATCTGTCTAAGGTTGTAGATCAACATGGACAACTCATTGATACTTTAGAAAATGTTCTAGCAGTTGTAGATAGATTAATGGATGAAACAAGCGAGATAACGTTGCAAGATACTGCTGATGTATTTAAAAGTTTGCAAGATAAATATTATGAGGAATACAAGATGTATGAATTAGGTGATTTGGCAACTAGTTTTGTGGGTCCAAAAATAAAAGATTCTTTACTTTCTTGGAATCCATTAATGCAACCGAAGCAGCCTATAAAATTATTTGAACAATGGAAAGAAATATTAGAGACTGGTACAAGTCCACTTCAAACAAGAACGATACAACCTTACGACCAACTTGTTTGGAATGCATGGATGCCTTCTATCAGAGGAGCTGTACAACAGTGGACATGCAGGCAACCAGATTCGTTAATAGAGCTATTAGAGCACTGGATACCATTGCTACCTGGTTGGATTTTTGAAAATATTTTGGATCTATTAATACTTCCTAAACTTACTTTAGAGGTAGAAGAATGGAACCCACTCACAGATACTGTTCCAATACATACATGGATCCATCCTTGGTTACCATTAATGCGTAATTGGTTGGACACATTAATATATCCAATTATAAGACGCAAACTTGGTTCTGCTTTGGGAGGTTGGCATCCGTCAGACAGATCAGCAAGATTAATGTTACAACCTTGGGCAGAAGTATTTGCTAAGGGTGATATGGAAGCTTTTCTAGTAAAAAATATTATACCAAAACTTCAAATAGCTCTTTCCGAGTTTGTTATAAATCCACATCAACAGCATTTGGATCAATGGAATTGGGTGATAGAATGGAAAGAATTAATACCATCTCATATAATGGCGAATTTACTCGATAAATTCTTCTTTCCTAAATGGGAACAAGTTTTGACTTTTTGGTTAAATCATTCTCCAAATTACGATCAAGTAATGAATTGGTATATGGGATGGAAAGGAATGTTGAGCGATAAGTTATTGGCAGAACCATTAGTGAAAGAACATTTTAAGAAGGCGATCGATATGTTAAATAGAGCCGTGGCTGCACCTCCGAGTCACCAACCAGGAGCTATGGACCAAGTTTCGTACTTGAACAATTTGGAGAGGAATCAACCGACGATAATGTCACAGATGTCATCAGTGGTACAACCGAGGATGGAGAGGTTGGCAGAAGCAGTGAGAATAGCAGCACCACAAATTCATCTAGGCTTTAAAGATCTCATACAAAGGAAGTGTGAAGAACGAGGTATCCTTTTCATGCCTATTCCAAATAAATACAGGGAAGCGAAGCAAGTTTACAAAGTGGGTAATGTCCAAGCGTATATAGACGGCAAAATGATATTTGTTTATCATAATGGAGCCAATTGGACGCCGACGAATGTGAACGCCTTACTCGATATGGCGGAACTTTAG
- Protein Sequence
- MSEDEVESFEISYDFENEFNINRPRRKLSKKQQMLGIWADDSDEDELSARPSFKTYNKGPKNYTVPVNFVAGGIQQAGKPAEEKEDKXXXXXXXXXXXXXXXXXQRDGEGYFNSSSSEDEKPSNSKQRTSFSLNVEGDIAGLRKKRYQVNPSFMKSGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHFRKGRGAIGAYGPEKGPKMVEKRKEEAEDAKDSKSKVSQWRKGDSINNKKKVKYSYRSVDQVLEDGKLKPNRKLPLSSEMSRVKVIDMTGPEQRILSGYHAIASGQQYPDETIPSVNKKDKINFSLPELQHNLNLLVDMCEQDIIQNDRRTRHLSDRVIALEAEKRNLSKVVDQHGQLIDTLENVLAVVDRLMDETSEITLQDTADVFKSLQDKYYEEYKMYELGDLATSFVGPKIKDSLLSWNPLMQPKQPIKLFEQWKEILETGTSPLQTRTIQPYDQLVWNAWMPSIRGAVQQWTCRQPDSLIELLEHWIPLLPGWIFENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMRNWLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAEVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVIEWKELIPSHIMANLLDKFFFPKWEQVLTFWLNHSPNYDQVMNWYMGWKGMLSDKLLAEPLVKEHFKKAIDMLNRAVAAPPSHQPGAMDQVSYLNNLERNQPTIMSQMSSVVQPRMERLAEAVRIAAPQIHLGFKDLIQRKCEERGILFMPIPNKYREAKQVYKVGNVQAYIDGKMIFVYHNGANWTPTNVNALLDMAEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01513470;
- 90% Identity
- iTF_01513470;
- 80% Identity
- -