Vpen005804.1
Basic Information
- Insect
- Vespula pensylvanica
- Gene Symbol
- bab1
- Assembly
- GCA_014466175.1
- Location
- CM025347.1:796632-809514[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-18 8.2e-15 53.7 0.0 1 43 63 106 63 108 0.95 2 2 1.3 1.8e+03 -1.8 1.4 6 15 186 195 184 198 0.88
Sequence Information
- Coding Sequence
- ATGAAGGAAGAAAAACTCGCCAAGTTGTTGGAATCGTCCCACGCTTGGCTCGGTGCCTCCACCTCCAGTATAGCAGCAGACAGCTACCAGTATCAGCTGCAGTCGATGTGGCAGAAATGTTGGAACACCAATCAGAGTCTGGTCCACAATCTACGCTTCCGTGAACGTGGCCCATTGAAATCCTGGAGACCGGAAACAATGGCGGAAGCGATCTTCAGTGTCCTTAAGGAAGGACTTTCATTGAGTCAAGCAGCGAGAAAATACGACATCCCTTATCCGACATTCGTCCTCTATGCGAATAGAGTCCACAACATGCTAGGTCCTAGCGCTGATGGCGGGGCCGATTTGCGGCCGAAAGGAAGAGGACGACCGCAAAGGATTTTACTCGGCGTTTGGCCAGACGAACACATTCGTGGTGTCATTCGTGCAGTTGTCTTCAGAGACGGTCATTCTCCACATATTGTTAAAGAGGAACCAGCATCGATGTATCCGACTTTGGCGAATTATGCAGCTTGCAATGGACCAGAAGGAGCCGTTAGTCCTGGTGCTGCTGCCGCTGCGGCGGTGGCTGCTGTTGCTCAAGGTCTAAGGCATCAAATGTGTAGCATGGTAGCAGCAGCACACTCGCAACACGACATGATGGCGACGAATCTATCGACGAGCCTATCGACGAGTCTCACGTCGAATCTCCAAGCTGCGATGCAAGCGAGTCAGCATCACAACAACAATAATGCGAGCGGTATCGGTAGTAACAATGGAGCCGGAATGATCGGTTGTGGTGGTAACAACAATACCGGTAATTCACCATTGAATCTTGGCCTGGCGAGTCCAGGCTCTGGTGGACCACCTGAAAGTCCAATGGAAAGTCCACTAGCGAGTCCTTTGGGCCCATTGATGGATCCTGGACATATACCGGGTAGCGTAGAAGTTGGTATCGGTGTCAGTGGTATGACCTATAAGCCAGCACGGAGCTTCGTCAGTCCACGACCGGAGAATCTCTTTCAAGAGGATATAGCCGACCTCGTAAAGAGTCCGCACAGTCTCAAGGACAAGGACAAGATCCCAGTGAAGTTGGAACCCCTTACCGACTCCCGTTGCGAATAG
- Protein Sequence
- MKEEKLAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPASMYPTLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQHDMMATNLSTSLSTSLTSNLQAAMQASQHHNNNNASGIGSNNGAGMIGCGGNNNTGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPGHIPGSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHSLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00227880;
- 90% Identity
- iTF_01513392; iTF_01514748; iTF_00756545; iTF_01512107; iTF_00754484; iTF_01089913; iTF_01234266; iTF_01234946; iTF_01233566;
- 80% Identity
- iTF_01513392; iTF_01514748;