Ospi002436.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- bab1
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000013.1:2046222-2047845[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-18 8.8e-15 53.9 0.0 1 43 28 71 28 73 0.95 2 2 2.1 2e+03 -1.6 1.4 6 15 151 160 149 163 0.88
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAATCAGAGTCTGGTGCACAACCTACGCTTCCGTGAACGCGGTCCGTTGAAATCCTGGAGGCCGGAGACGATGGCGGAGGCGATCTTTAGCGTGCTGAAGGAGGGACTTTCTCTCAGCCAAGCAGCGAGGAAGTACGATATTCCTTATCCGACATTCGTCTTGTACGCGAACAGAGTCCACAACATGCTGGGTCCTAGCGCAGACGGCGGGGCCGACTTGCGACCGAAGGGCAGAGGAAGACCACAGAGGATCTTGCTAGGTGTCTGGCCGGACGATCACATTCGCGGTGTCATTCGGGCCGTCGTCTTCAGAGACGGACACTCGCCGCATATTGTAAAGGAGGAGCCAGCCTCGATGTATCCGAGTTTGGCGAATTATGCAGCTTGCAACGGGCCTGAAGGAGCTGTCAGTCCTGGTGCGGCTGCCGCTGCGGCGGTCGCTGCAGTCGCTCAAGGTCTACGACACCAGATGTGCAGCATGGTAGCAGCAGCGCACTCGCAGCAGCACGACATGATGGCGACGAATCTGTCGACGAGCCTCTCGACGAGTCTCTCGTCGAATCTCCAAGCAGCGATGCAGGCGAGTCAACATCACAATAACAATAACGCGAGTGGTATCGGCAGTAACAACGGTGCGGGTGGAATCGGTTGCGGCGGAAGCAACAACACCGGCAATTCACCGTTGAATCTCGGTCTGGCGAGTCCAGGCTCCGGTGGACCACCCGAGAGCCCGATGGAAAGTCCACTGGCGAGTCCACTAGGTCCACTAATGGATCCTGGACACTTACCGGGTAGCGTGGAAGTTGGCATCGGTGTCAGCGGCATGACTTATAAACCTGCCCGAAGCTTCGTCAGTCCACGACCGGAGAATCTCTTCCAGGAGGACATCGCCGACCTCGTAAAGAGCCCGCACAGTCTCAAGGACAAGGACAAGATCCCGGTGAAGCTTGAACCACTCACCGACTCCCGTTGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRDGHSPHIVKEEPASMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTSLSTSLSSNLQAAMQASQHHNNNNASGIGSNNGAGGIGCGGSNNTGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPGHLPGSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHSLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_01514077;
- 80% Identity
- -