Vger006222.1
Basic Information
- Insect
- Vespula germanica
- Gene Symbol
- dmrt1y
- Assembly
- GCA_905340365.1
- Location
- HG996535.1:2525151-2530874[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-18 3.3e-14 52.2 12.4 3 46 28 71 27 72 0.96 2 2 7.6e-21 2.7e-17 62.0 12.8 2 47 182 227 181 227 0.98
Sequence Information
- Coding Sequence
- ATGGATCACGTGGACCAATCCGTAACTGCACGTATGGAGAATAACGCGTCCTCGAACATGTCTGTAGGTTCGCGAATAACGAGGAATTGCTCGCGGTGTCGAAATCATGGACAAAAAATTGCCCAGAAGGGCCACGGAAAAGACTGTAAGTACCGCGATTGCGTCTGTGAACGTTGTAAACTTTTTTCTGATCGACGAAGCATGATGGCCAGGAATACTGAATTGAGAAGAACTATGACTCAAGACGAGGATTCAACATCCCTCTCCATAGATGGATCCTCGCTCGGTTCGGGTCCGCAATCCGTGAAGAATCTCGAAGGAAGTTACGACAGCAGCAGCGGCGACTCGCCAATCAGCAATCACGGAAGCAACGAAATGCAGGACGGGAACAGCGACGTTGCTGGAATTGCTTCCTCAAAAAAGGCACCATCTTCAAATCGTTCGCCAGCCACAACATCTTGGCCACAATGGCAGGCTGgGGCAGATTCAAACGCATCTTGGGACGCATCCTCGACCTCGAACAGCGGCACCAACTCACGTACGAAACCGACGTGCACACGTTGCCGTAATCATGACGTTACCAGCATTCTTAAGGGTCACAAGAGGTACTGCGACTTTATTTACTGTCATTGCGTTAAATGCCGTAACACACTTAAGCGCCAGAAGCAGATGGCAAAACAAACCGCACTTAAAAGGGCTCTTATTCAAGACGAGGaacaaataagaaagtatGGTAAGCTGGTGATGCCAGCGATGCCTCCAGCAGTAGAAAACAAGCATATACCAACTGTCCCTCGACCAGCGTGGAGCGTCGAAGGCAGTTACGGTGGCATCAATGGCGTGCTTAATACTCCAACTCCAAGAAAATTGCCAGTCGTAGATACGCACTTGCCTCCTTCGATCTATCAGATTCAACCACAACCCAGTAAGTCTACTTTATTATCACTTTGTTATTTCGCTATGCTTACGAAATCTCTTCGACAAAATGCACAAAATCCATCGATTTTTGTGACAACTTTGttctga
- Protein Sequence
- MDHVDQSVTARMENNASSNMSVGSRITRNCSRCRNHGQKIAQKGHGKDCKYRDCVCERCKLFSDRRSMMARNTELRRTMTQDEDSTSLSIDGSSLGSGPQSVKNLEGSYDSSSGDSPISNHGSNEMQDGNSDVAGIASSKKAPSSNRSPATTSWPQWQAGADSNASWDASSTSNSGTNSRTKPTCTRCRNHDVTSILKGHKRYCDFIYCHCVKCRNTLKRQKQMAKQTALKRALIQDEEQIRKYGKLVMPAMPPAVENKHIPTVPRPAWSVEGSYGGINGVLNTPTPRKLPVVDTHLPPSIYQIQPQPSKSTLLSLCYFAMLTKSLRQNAQNPSIFVTTLF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01512205;
- 90% Identity
- iTF_01512205;
- 80% Identity
- iTF_01514175;