Vcra012465.1
Basic Information
- Insect
- Vespa crabro
- Gene Symbol
- DMRTB1
- Assembly
- GCA_025728115.1
- Location
- JAITYU010017212.1:23253-29123[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-17 8.3e-14 50.9 13.5 3 46 27 70 26 71 0.96 2 2 2e-21 7e-18 63.9 12.6 2 47 181 226 180 226 0.98
Sequence Information
- Coding Sequence
- ATGGATCACGTGGATCAATCAAGTGCACGTACGGAGAATAACGCGTCCTCGAACATGTCTGTAGGTTCGCGAATAACGAGGAATTGTTCGCGATGTCGAAATCATGGACAAAAAATTGCCCAGAAGGGCCATGGAAAAGATTGTAAGTACCGCGATTGCGTCTGTGAACGTTGTAAACTTTTTTCCGATCGACGAAGCATGATGGCCCGGCATAATGAAATGAGAAGAACTATGGCTCAAGACGAGGATTCAACATCACTCTCCATAGATGGATCCTCGCTCGGTTCAGGTCCGCAATCGGTGAAGAATCTCGAGGGAAGTTACGACAGCAGCAGTGGCGACTCACCAATCAGCAATCACGGAAGCAACGAAACTCAGGACGGGAACAGCGACGTTGCCGGAATTGCTTCCTCAAAAAAGGCACCGTCTTCAAATCGTTCGCCAGCCACAACGTCCTGGCCACAATGGCAGGCCGGGGCGGATTCAAATGCATCTTGGGACGCATCCTCAACCTCGAACAGCGGCACCAATTCACGTACGAAACCGACGTGCACACGTTGCCGTAATCATGATGTTACTAGCATTCTTAAGGGTCACAAGAGGTACTGCGACTTTATTTACTGTCATTGCCCCAAATGCCGTAACACGCTTAAGCGGCAAAAGCAAATGGCAAAACAAACCGCACTTAAAAGGGCTCTTATTCAAGACGAGGAACAGATAAGAAAATATGGCAAGTTGGTGATGCCAGCGATGCCTCCAGTAGAAAACAAGCATGTACCAACTGTTCCTCAACCAACGTGGAACATCGAAGGCAGTTACGGTGGCATCAATGGCGTACTTAATACTCCAACTCCAAGAAAATTGCCAGTCGTAGATACGCACTTGCCTCCTACGATTCATCAGATTCAACCACAGCCTAGTAAGTCTACTTTATTATCACTTTGTTATTAA
- Protein Sequence
- MDHVDQSSARTENNASSNMSVGSRITRNCSRCRNHGQKIAQKGHGKDCKYRDCVCERCKLFSDRRSMMARHNEMRRTMAQDEDSTSLSIDGSSLGSGPQSVKNLEGSYDSSSGDSPISNHGSNETQDGNSDVAGIASSKKAPSSNRSPATTSWPQWQAGADSNASWDASSTSNSGTNSRTKPTCTRCRNHDVTSILKGHKRYCDFIYCHCPKCRNTLKRQKQMAKQTALKRALIQDEEQIRKYGKLVMPAMPPVENKHVPTVPQPTWNIEGSYGGINGVLNTPTPRKLPVVDTHLPPTIHQIQPQPSKSTLLSLCY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01514175; iTF_01513495;
- 90% Identity
- iTF_01514175; iTF_01513495;
- 80% Identity
- -