Chis024301.1
Basic Information
- Insect
- Cataglyphis hispanica
- Gene Symbol
- RCOR3
- Assembly
- GCA_004195275.1
- Location
- SGAY01003477.1:1-3262[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.8 1.1e+04 -2.6 0.0 30 45 1 16 1 17 0.77 2 3 1.4 2.7e+03 -0.7 0.3 37 44 122 129 117 130 0.87 3 3 7.7e-13 1.5e-09 38.6 0.0 3 46 220 263 219 263 0.98
Sequence Information
- Coding Sequence
- ctCCCTGACAAATCTATTGCAAGTCTTGTCAAATACTATTATGGCTGGAAAAAAACACGAAGTAGGACATCATTAATGGACAGGCAAGCACGAAAATTGACGAGCGGCTGTAAAGAAGGCGAGAATGGCAGCGAAAACGGAAGCGAGCTCGGCTCCAACACAGATAGCGAATCTGAAGAAAAAAAATGGACGATCCACCGCGGAATACGTCGTGGAAAGAACCAAGCTGTGCCAGGAAGCCAAGGCACTGATGTTAAGGCCCCATCCGACTCGGAAAACGCCCCTCAGGTTCAGGGCTCATGTAGCAACTGTGGCGTTGCATGCCATAGTGTTCGTGCGACGCCCAAAGGACACGCGTGTCATAGCTGCTATCTACATTGGAGGCGCACCGGTGTAGCGAGACCGTTAACTTCCATGCCGGGTCGTACGAATAAAAGAAAGCCACCTCGAGGCTTGGTTGTGAATCACGATGATTTGGCGGCTTTGGCTGGTCAACCAAACCAGGCCAACAACAGTTTGCAAGCGATCGACACTGAGATCGTTAGCCTAAAGCGTCAAATACAAGCCAACAAACAACAAGTGAGCGCACTGAAACGAAAGACTGCCGATGGTATTGACCATCTACGACCACCGGAAGTATCGAGCCGTATAAATGCTCGTTGGACAAACGATGAATTGTTATTGGCTGTTCAAGGTATCAGAAAATATGGAAAGGATTTCGCCGCGATCGCTGAAGTTATCGGAACCAAAACTGAGGCACACTTACgatcattttttgttaattatcgaCGAAGATATAATTTGGACGCGGTTCTAAAAGAATTCGAGGCTGAAAACGGTCCTATAGTGATCgaagatgaaaaagaagagaagATGGATGTTGATCAATCAAACGATACCGCAGAGTCATCTCAGAAGGGAAAAACTTCCACTGGGCCTGCACAAGCTACTAAATAA
- Protein Sequence
- LPDKSIASLVKYYYGWKKTRSRTSLMDRQARKLTSGCKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNQAVPGSQGTDVKAPSDSENAPQVQGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLTSMPGRTNKRKPPRGLVVNHDDLAALAGQPNQANNSLQAIDTEIVSLKRQIQANKQQVSALKRKTADGIDHLRPPEVSSRINARWTNDELLLAVQGIRKYGKDFAAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLKEFEAENGPIVIEDEKEEKMDVDQSNDTAESSQKGKTSTGPAQATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00684724;
- 90% Identity
- iTF_01422857; iTF_00684724; iTF_01498123; iTF_01513401; iTF_00182559;
- 80% Identity
- -