Basic Information

Gene Symbol
ARID5B
Assembly
GCA_014083535.1
Location
JACHAV010000007.1:6400116-6564205[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.6e-24 1.2e-20 73.2 0.0 1 89 319 405 319 405 0.95

Sequence Information

Coding Sequence
ATGGATAAGATAGAGTTGTTGGGCGGTGCTTGCTTCAGCCATGGCCCTTATACGTTCTACAAAGCCGTTAGGATAGGAAATGGACGAGTCCTACGACTCGGCAATTTCTTCCTGACGAAACTTTGGAGCGACGCCGACCTCGTAAGCATCGGTGAGCTTCAGTTACTTTGGATGGACAGCCGTGGACCAAATCAACCGTTGGCATCGTTACGGCTCTATTTCCTTCCGGAGAACACCCCGGACGGTCGTAGGGATACGCACGGAGAGgACGAGGTGTTGACGATATCTGAAAAAGTTGTCGTTCGTGTTCACGACTTGGTTACCTGGTTATCACCTACGTTGGAATGGTCGTGGGGCCGTGAAATTTTTTACCCGAGTTCACCAACACCAACATCCTCTCCTGAGAGTAGTCCACCGAGATACGAAATTCCTCAACCCCAGGTTTTGACCGATCCTGGAATCGATTTTTCTGACGTTGACAAACAACAAAAGGAATATGAGAGCAATATAAGTTCTTCGAAAAAATCTGATTGCGACGGTCAAACCAAAGTGGTTGTACTTTCGTATCCGAGGTATTGTAGATATCGAGCACTTTTACGAAGATTGGAAGGTGCGGAACCTTCCTGGCTTTGTTCTTCGGTAGCTGCTGCACTCGGTGGATTCACTGCTACACCTGGAACGCGCGTACTCTTCTGCAGAGATACCTTCGATTATCCTGATTTGGAGACCCATGAACTACTTTGTAATCATTTAGCGCCAAAATTAAAAGGACGGCCACGGAGGAAACGTAAAAAGCGAAGTGCTTCACCTGGTGAATCCAGCAACGAAAGTGAAGCTTCAGTTGCTTCTTCGTCAAAATGTGCGTCGAGCAATTCGAGTCAACAATTGATACCAGCTCCCGTTGGAAGGCCACCATCGGCGGGTGTACGTCGAAGCGAACGCAAAACAAGtgccgaagaaaaaaaattcatggtCGATGTACAGAATTTCATGAATTCAAGGGGCACTCCAGTCGGAAAGATGCCATTGTTGGGATACAGGCAAATCGATCTGTTCCTGTTTTATACGAAGGTACAGACACTCGGTGGATACGATTCCGTTAGCGCTGGACGTCTCTGGAAAACCATTTATGATGATATCGGTGGTAATACAGGATCCACCAGTGCTGCTACTATAACTCGTAGACATTACGAAAGGTTGCTTTTACCTTATGAAAGGTATCAAAGAGGTGAGGAACCTAAAGTGAGATTAACACACGGTAGACGTACGAAAACTAGTAGTATATCTGAAAGTCCGGTGGATGGAGATCAAGAGACCAGCGACTCACGTTCATCGGAGACACCACCGTTGGTTGAAACACCACCTGTAAACACTACTCCACCTTTGCAACCAGTTTTATCAAGCTCGTCTTTTCCATCAAACGAGAAACCGAAATCAGAAGTCGGAAAAACATCCTCTTTGCGTAGCGTGAGAGTTAAACCGGAACGTTTGAAATCATTGAATACGATAATCGCCAACAACACACCACCAACGAGCCAGCAAACCAATCAACTGCCAAGTCCTCCTCCATCATCGAACACGCCAATTTCGACTCCAAGTAGTACACCTTCCACAACGCCTACGATCGTAACCGGGAATCAAAGTGTTCTTGAACGGCAATTAAACAGTCCTCTTGTGTCCCAACAAGTACCACCGTCCTGTTCGTCTCCAGGATTACCAGTGAGCACAGTAGCAATGAATGCATCGACGGTAGTAACGTTGACGCCGCCACCTGAAAAAGACATGAAAGAGATTAAATTAGATCCTAAGCAAACGACTCTGCTGGCACAGGGTAAGGAGAACATACCGTTGTTCGGTGAGAAGCCAATCTTCACAGAGAAGGCGATAGTAGCGCCAAGATCACCCGAGGTGATCGATCTCGAAAATGAAAGTGATACGAGTAgagataagataataataccaagctttaaaaaacgaaaattagaaatattgcGGGAGGGCGGTCTTGAAGTTACAGCCGTTGATCTTGATGCAAGACCGAGCGTGATTCAGAGCAGCGTAACGCCTACCCCGCCTACGGTAAAATCCGAGGATAAGTTATCGTCGCCTTATCCACTTTCCGTTACCCCGAATTCGGTGCCGAAACTTATATCCGTTACCGTAACACCGGACATAGGACATATGTTGCCATCACCTCAGGAGAATCAGACCAGTCATCACCAGCAGCCTCGGTTTCAATCCCAAGGAAAACAACATCCCGTccattacaataacaataatagtacgACGAACAACAATAATACGACAAATAGTAAAGTTATTAATCTTGGTAGTTCGAACAATGCTGGATTATTGCAGTTATACGCGAATGCGAACATGGTACCAGCGTCGGCAACCCAGATGGTTAATTCTAATAATCGTTTTGTACCACCAAACGTTCCTAACGGGAGAATAATATTACCACCGAAGGTTACGCAGTCGAGGTCAATTTTCGCGCACAACGAAAAAACTGTATATGGAAATCCAAAAGACATTCTAATTTCTCCAAAGTATCGTCCTATTACGCATCAGCGGATACAGCCACAGCCGATCGGTAACAGTGACTTCAGTGGAAACGTTGGAGTTCTCGATCTTACACAAAAGCCAATCGAAAAGGCAACTTTCTCAAGACCAAGTCTTGAGATAGTTAGGGTACCTGTAGTGCCGAGGCCTAATCCGCTAAATTTAGAAATGAGGAAATCGCCGACGATTAAAGATAAGTCAACCGACTGTACGACGAAACGAGCCTCCTTTCCCGGTTATCAAACTGTTCTCGATAGTCGGACTATGGCATCGAATAATTTAGAAATCACATTAGTCAATcctaaacaaaaaattaataatcataacagtGTACCGTCATCTCACGTGCAAATACCGAGCCCACCTAACAGAACTAGTAATCATCCTTCGGTAGCACAAAGAAGACAAATTAACGGGAAATATGCGGGAAGGAACGAACCAGTGTCGCCGTATACACCAAGGAAACCTACGCATCCTGTAATACCCAATGTACCTAATCTAAATCATTTGAATAGTGTGAATTCTTCTTATCCTAGAATGACTAACAACGTTCAACCACAAATAGGTATAGATAGAAGGAAAACAAGCGAGGCTGGCAAGGATCAGCAACGTAGAATTAGCGATGGTGATAAACCTGTAGTGTTGCAATCACAACAGCAGGACATAAGACAGACCACAGAGATTGGACGGCGTCACAGTGTACCAAGTATACCCTCCGGTTTTATACCCACTGTGCCACCAAGCAATCCAGCTTTTCTTTCGCAACTGCCAAACACTCCAGGCAAGTTCCTACCAATGTTGGACCCCATGTACTACTCTGCCATTTACAATGGCTTGTTTCCACCTCCGATACCGCCTGCAGCTGCAACGTCCTTTCTACCACCGGAGTTCAACGCTTACTACAAGGAACTATTAGCTTCCTCGCAACCAAGACTGGGGATGGCAGGTCAGCATCAACCTGCTGTACCGACATCCAAATAG
Protein Sequence
MDKIELLGGACFSHGPYTFYKAVRIGNGRVLRLGNFFLTKLWSDADLVSIGELQLLWMDSRGPNQPLASLRLYFLPENTPDGRRDTHGEDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREIFYPSSPTPTSSPESSPPRYEIPQPQVLTDPGIDFSDVDKQQKEYESNISSSKKSDCDGQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSVAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASSSKCASSNSSQQLIPAPVGRPPSAGVRRSERKTSAEEKKFMVDVQNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQTLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEEPKVRLTHGRRTKTSSISESPVDGDQETSDSRSSETPPLVETPPVNTTPPLQPVLSSSSFPSNEKPKSEVGKTSSLRSVRVKPERLKSLNTIIANNTPPTSQQTNQLPSPPPSSNTPISTPSSTPSTTPTIVTGNQSVLERQLNSPLVSQQVPPSCSSPGLPVSTVAMNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGEKPIFTEKAIVAPRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQSSVTPTPPTVKSEDKLSSPYPLSVTPNSVPKLISVTVTPDIGHMLPSPQENQTSHHQQPRFQSQGKQHPVHYNNNNSTTNNNNTTNSKVINLGSSNNAGLLQLYANANMVPASATQMVNSNNRFVPPNVPNGRIILPPKVTQSRSIFAHNEKTVYGNPKDILISPKYRPITHQRIQPQPIGNSDFSGNVGVLDLTQKPIEKATFSRPSLEIVRVPVVPRPNPLNLEMRKSPTIKDKSTDCTTKRASFPGYQTVLDSRTMASNNLEITLVNPKQKINNHNSVPSSHVQIPSPPNRTSNHPSVAQRRQINGKYAGRNEPVSPYTPRKPTHPVIPNVPNLNHLNSVNSSYPRMTNNVQPQIGIDRRKTSEAGKDQQRRISDGDKPVVLQSQQQDIRQTTEIGRRHSVPSIPSGFIPTVPPSNPAFLSQLPNTPGKFLPMLDPMYYSAIYNGLFPPPIPPAAATSFLPPEFNAYYKELLASSQPRLGMAGQHQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2