Basic Information

Gene Symbol
ARID5B_1
Assembly
GCA_905475345.1
Location
FR997674.1:7981364-8139478[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-24 1.1e-20 73.3 0.0 1 89 262 348 262 348 0.95

Sequence Information

Coding Sequence
ATGGACAGCCGTGGACCGAATCAACCGTTGGCATCGTTACGACTCTATTTCCTTCCGGAGAACACCCCGGATGGTCGTAGGGATACGCATGGAGAGGACGAGGTGTTGACGATATCTGAAAAAGTTGTTGTCCGTGTTCACGACTTGGTTACCTGGTTATCACCTACGTTGGAATGGTCGTGGGGTCGTGAAATTTTTTACCCGAGTTCACCAACACCAACATCCTCTCCTGAGAGCAGTCCACCGAGATACGAAATTCCTCAACCTCAGGTGTTGACCGATCCTGGAATCGATTTTTCTGACGTTGACAAACAACAAAAGGAATACGAGAGCAATATAAGTTCTTCGAAAAAATCCGATTGTGACGGTCAAACCAAAGTGGTTGTACTTTCGTATCCGAGGTATTGTAGATATCGAGCACTTTTACGAAGATTGGAAGGTGCAGAACCTTCCTGGCTTTGTTCTTCGGTAGCTGCTGCACTCGGTGGATTCACTGCTACACCTGGAACGCGTGTACTCTTCTGCAGAGATACCTTTGATTATCCCGACTTGGAGACTCATGAACTACTCTGCAACCATTTAGCGCCTAAATTGAAAGGACGGCCACGAAGGAAACGTAAAAAGCGAAGTGCTTCACCTGGTGAATCCAGTAACGAGAGTGAAGCTTCGGTTGCTTCTTCGTCAAAATGTGCGTTGAGCAATTCGAGTCAACAATTGATACCAGCTCCTGTTGGAAGGCCACCATCGGCGGGTGTACGTCGAAGCGAACGCAAAACAAGTGCCGAAGAAAAAAAGTTTATGGTCGATGTACAGAATTTCATGAATTCACGAGGCACACCAGTTGGAAAGATGCCATTGTTGGGATACAGGCAAATCGATCTGTTCCTGTTTTACACGAAGGTACAGACACTCGGTGGATACGATTCCGTTAGCGCTGGACGTCTCTGGAAAACCATTTACGATGATATCGGTGGAAATACAGGATCCACCAGTGCTGCTACTATAACTCGTAGACATTACGAAAGGTTGCTTTTGCCTTATGAAAGGTATCAAAGAGGTGAGGAACCCAAAGTGAGATTAACACACGGTAGACGTACGAAAACGAGTAGTATATCTGAAAGTCCGGTGGATGGGGATCAAGAGACCAGCGACTCGCGTTCATCGGAGACACCACCGTTAGTTGAAACACCGCCTGTAAACACTACTCCACCTTTGCAAGCAGTTTTATCGAGCTCGTCATTCCCATCGAACGAGAAACCGAAATCAGAAGTCGGAAAGACATCCTCTTTGCGTAGCGTGAGAGTTAAACCGGAACGTTTGAAATCATTGAATACAATAATCGCCAACAATACAGCACCAACCAGCCAGCAAACCAATCAACTGCCAAGTCCTCCTCCGTCATCGAACACGCCAATTTCGACTCCGAGTAGTACACCTTCCACGACGCCTACGATCGTAACCGGGAATCAAAGTGTTCTCGAAAGGCAATTAAACAGTCCTCTCGTGTCCCAACAAGTACCACCGTCTTGTTCGTCTCCAGGATTACCAGTGAGCACAGTAGCCATGAACGCATCGACGGTAGTAACGTTGACGCCGCCACCTGAAAAAGATATGAAAGAGATTAAATTAGATCCTAAGCAAACGACTCTGCTGGCACAGGGTAAGGAGAACATACCATTGTTCGGTGAGAAGCCAATCTTCACGGAGAAGGCGATAGTACCGCCGAGATCACCCGAGGTGATCGATCTCGAAAATGAAAGTGATACGAGTAGGGATAAGATAATAATACCAAGTTTTAAGAAACGAAAATTAGAAATATTGCGAGAGGGCGGTCTCGAAGTTACAGCCGTTGATCTTGATGCAAGACCGAGCGTGATTCAGAGCAACGTAGCGCCTACTCAGCCTACGGCGAAACCCGACGATAAGTTACCGTCGTCTTATCCGCTTTCCGTTACTCCGAATTCGGTACCAAAACTTATATCCGTTACCGTGACACCCGACATAGGACATATGTTGCCATCACCTCAGGAGAATCAGACCAATCATCAACAGCCTCGGTTTCAGTCCCAAGGAAAACAACATCCCGTCCATTACAATAACAATAATACTACTACGACGAACAACAATAATACGACGAACAGTAAAGTTATTAATCTTGGTAGTTCGAACAATGCTGGATTGTTGCAGTTATACGCGAATGCGAACATGATACCAGCGTCGGCAACCCAGATGGTTAATTCCAATCATCGTTTTCTACCACCGAACGTTCCTAACGGGAGAATAATATTACCACCGAAGGTTACGCAGTCGAGGTCAATTTTCGCGCACAACGAAAAAACTGTATACGGAAATCCAAAAGACATTCTAATTTCTCCAAAGTATCGTCCTACGCAGCAGCGGATACAGCCACAGCCGATGATCGGTAACAGTGACTTCAGTGGAAACGTTGGGGTTCTCGATCTAACGCAAAAGCCAACCGAAAAGGCAACTTTCTCAAGACCGAGTCTAGAGATAGTTAGGGTACCTGTAGTGCCGAGGCCTAATCCGCTCAATTTAGAAATGAGGAAATCGCCGACGATTAAAGATAAGCCAACCGATTGTACGACGAAACGAGCGTCTTTTCCCGGTTATCAGACTGTTCTCGATAGTCGGACTATGGCATCGAATAATTTAGAAATCACATTAGTCAATCCTAAACTAAAAACTAATAATCATAGCAGTGTACCGTCGTCTCACGTGCAAATACCGAGCCCACCTAACAGAACTAGTAATCATCCTTCGGTAACACAAAGGAGACAAATTAACGGGAAATATGCGGGAAGAAACGAACCAGTGTCGCCGTATACACCAAGGAAACCCACGCATCCCGTAATACCCAATGTACCTAATCTAAATCATCTGAATAGTGTGAATTCTTCTTATCCTAGGATGACTAACAACGTTCAACAACAAATAGGTATAGATAGAAGGAAAACATGCGAGGCTGGCAAGGATCAGCAACGTAGAATTAGCGACGGTGATAAACCTGTAGTGTTGCAATCACAACAGCAGGACGTAAGACAGACCACAGAGATTGGACGGCGTCACAGTGTACCAAGTATACCCTCCGGTTTTATACCCACTGTGCCACCAAGCAATCCAGCTTTTCTTTCGCAACTGCCAAACACTCCAGGCAAGTTCCTACCAATGTTGGACCCCATGTACTACTCTGCCATTTACAATGGCTTGTTTCCACCTCCGATACCGCCTGCAGCTGCAACGTCCTTTCTACCACCGGAGTTCAGCGCTTACTACAAGGAACTGTTAGCTTCCTCGCAACCAAGACTGGGGATGGCAGGTCAGCATCAACCTGCTGTACCGACATCCAAATAG
Protein Sequence
MDSRGPNQPLASLRLYFLPENTPDGRRDTHGEDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREIFYPSSPTPTSSPESSPPRYEIPQPQVLTDPGIDFSDVDKQQKEYESNISSSKKSDCDGQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSVAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASSSKCALSNSSQQLIPAPVGRPPSAGVRRSERKTSAEEKKFMVDVQNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQTLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEEPKVRLTHGRRTKTSSISESPVDGDQETSDSRSSETPPLVETPPVNTTPPLQAVLSSSSFPSNEKPKSEVGKTSSLRSVRVKPERLKSLNTIIANNTAPTSQQTNQLPSPPPSSNTPISTPSSTPSTTPTIVTGNQSVLERQLNSPLVSQQVPPSCSSPGLPVSTVAMNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGEKPIFTEKAIVPPRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQSNVAPTQPTAKPDDKLPSSYPLSVTPNSVPKLISVTVTPDIGHMLPSPQENQTNHQQPRFQSQGKQHPVHYNNNNTTTTNNNNTTNSKVINLGSSNNAGLLQLYANANMIPASATQMVNSNHRFLPPNVPNGRIILPPKVTQSRSIFAHNEKTVYGNPKDILISPKYRPTQQRIQPQPMIGNSDFSGNVGVLDLTQKPTEKATFSRPSLEIVRVPVVPRPNPLNLEMRKSPTIKDKPTDCTTKRASFPGYQTVLDSRTMASNNLEITLVNPKLKTNNHSSVPSSHVQIPSPPNRTSNHPSVTQRRQINGKYAGRNEPVSPYTPRKPTHPVIPNVPNLNHLNSVNSSYPRMTNNVQQQIGIDRRKTCEAGKDQQRRISDGDKPVVLQSQQQDVRQTTEIGRRHSVPSIPSGFIPTVPPSNPAFLSQLPNTPGKFLPMLDPMYYSAIYNGLFPPPIPPAAATSFLPPEFSAYYKELLASSQPRLGMAGQHQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01512633;
90% Identity
iTF_01513258;
80% Identity
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