Basic Information

Gene Symbol
ARID5B
Assembly
GCA_032403825.1
Location
JAIFRP010000021.1:10269587-10277552[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-23 3.5e-20 71.9 0.0 1 89 239 325 239 325 0.95

Sequence Information

Coding Sequence
ATGTGCTCTATAAAGACCTGTCTAATTGACGAGGTGTTGACAATTTCCGAAAAAGTCGTCGTGCGTGTCCACGATTTGGTTACATGGTTATCGCCGACATTGGAATGGTCATGGGGCCGAGAAGTTTCCTACCCGAGCTCGCCAACGCCGACCTCATCTCCAGAGAGCAGTCCACCGAGACACGAGATGCCTCAGCTTCAGGTGTTGACGGATCCCGGAATCGATTTCTCCGACGTTGACAAGCAACAGAAGGAATACGAAAGTAATCTCAGTTCTTCAAAAAAATCCGAGCGTGGTGGGCAGACCAAAGTGGTCGTTCTCTCGTATCCAAGGTACTGTCGGTATCGAGCACTTCTGCGAAGACTGGAAGGTGCCGAGCCTTCGTGGCTTTGTTCATCGGTAGCTGCGGCACTCGGTGGTTTCACGGCTACACCTGGAACGCGAGTACTCTTCTGTAGAGATACTTTCGATTATCCCGACTTGGAGACCCACGAACTTCTTTGTAACCACTTAGcGCCTAAACTTAAAGGACGGCCACGAAGAAAGCGCAAAAAGCGAAGTGCATCGCCTGGCGAGTCGAGTAACGAGAGCGAGGCTTCCGTCGCGTCTTCGTCAAAATGCGCACCGACGAATTTGAGCCAGCAAGTCGTGCCCGCCGCCGTTGGGAGACCACCGTCGACGGGTGTGCGTCGAAGCGAACGCAAAACCAGCGCCGAGGAAAAGAAGTTCATTACCGATGTGCAAAATTTTATGAGCTCTCGAGGCACACCAGTCGGGAAGATGCCATTGTTGGGTTACAGGCAAATTGATCTGTTCCTGTTTTACACGAAAGTACAGACGCTCGGTGGTTACGACTCTGTTAGCGCCGGACGTCTTTGGAAAGCTATTTACGACGATATCGGTGGTAACACAGGGTCCACCAGTGCCGCGACTATAACGCGTAGACATTACGAAAGGTTGCTTTTACCATACGAAAGGTATCAAAGAGGTGAGGAATCAAAAGTGAGATTAACACATGGAAGACGTACCAAAACAAGTAGTATATCTGATAATACGGTTGATGGGGATCAAGAGACGAGCGATTCGCGTTCATCGGAAACACCACCGCTGGCCGAAACGCCACCCGTGAACACTGCACCTCCTCTGCAGCCTGTTCTGTCTGCATCGtCGTTCCCCACTAACGAGAAGCCGAAATCGGAAGTCGGCAAAACTTCCTCGCTGCGTAGTGTAAGAGTAAAACCAGAACGTCTTAAATCATTGAACACTATGATCGCCAACACCACGCCACCGACTAGCCAGCAAACCAGCCAACTGCCAAGTCCTCCGCCATCCTCGAACACGCCAATCTCAACTCCAAGTAGTACACCTTCGACGACGCCTACGATCGTTACCGGGAATCAAAGTGTTCTCGAACGCCAGCTGAATAGTCCACTTGTCTCTCAGCAAGTACCACCGTCCTGCTCGTCCCCGGGATTACCGGTGAGCACGGTAGCCATGAACGCTACCGCGGTGGTAACGTTAACGCCACCGCCTGAGAAGGACATGAAGGAGATTAAATTAGATCCTAAGCAAACCACCCTGCTGGCACAGGGTAAAGAGAATATCCCGTTGTTCGGCGAGAAGCCCATCTTCACCGAAAAAACAATAGTCCCGCCAAGATCGCCCGAAGtgatcgatctcgaaacgGAGAGCGACACGAGTAGGGATAAGATAATAATTCCCAGCTTTAAGAAGCGGAAGCTCGAAATTCTACGAGAAGGCGGTCTCGAGGTTACCGCGGTTGATCTCGACGCGCGACCTACCGTGATCCAGAGTAGCGTGACACCAACGCCAACTTCGGTCAAACCCGAGGAGAAGTTACCAATATCGTATCCGCTTCCCGTTACGCCGAATTCCATGCCGAAGCTTATCTCCGTCACGGTCACTCCTGATATAGGACACATGTTGCCGTCACCTCAAGAGAATCAGTCGaatcatcaccatcaccatcatcagcAACACCAGTCTCGATTGCAGTCGCAAGGAAAACAGCACCCCGTCCAtcacaataacaacaacagtacgaccaacaacaacaataacacgACGAACAGTAAAGTGATTAATCTCGGCAGTTCGAACAACGCTGGGTTATTGCAGTTGTACGCAAACGCGAATATGGTACCGGCATCGGCGAACCCAGTAGTTAATTCTAATCATCGCTTCGCACCGCCCAACGTTCCTAACGGCAGAATATTACCACCAAAGGTAACGCAGTCGAGGTCGATTTTCGCGCACAACGAAAAGATGGTATACGGAAATCCAAAAGACATTCCCATTCCTTCGAAGTACCGCCCTCCGCCACGGGTACAGCCACAGCTGATCGGTAACAGCGATTTCACCGGAAACGGGGAAGTTCTCGATCTTACCCAAAAGCCAAACGAAAAGGCAACCTACTCAAGACCGAGTCTCGAGATAGTAAGGGTACCTGTAGTGCCGAGGCCTAATCCTCTCAATTTAGAAACGAGGAAATCACCGACGAACAAAGACAGGCCCACTGATTGCACAACGAAGCGTGCATCCTTTCCGGGTTATCAGACTGTTCTGGATAGTCGGACTATGGCGTCGAATAATTTAGAGATTACGTTAGTAAATCCTAAGCAGAAAAATAATCATAGCAATGTACCACCGCCGTCTCACGTGCAAATACCGAGTCCACCGAACAGGACTAGTAATCATCCTTCGGTCGCGCAGAGGAGGCAAATAAACGGGAAATATGCTGCGAGGAGCGAACCGGTGTCACCGTATACACCAAGGAAACCTACGCATCCCATTATACCAAATGTACCTAACTTGAATCATCTGAACAGTATGAACTCGACCTATCCTAGAATGACGAACGTGCAACAGCAAGTGGCAACCATCGACAGAAGGAAAGCGATCGAAGGTGGCAAGGATCAGCACCATCGTAGAATCAGCGAGAACGACAAGCTCTCTGCGATGCAACAGCACCATCAACAACAGGACATGAGGCAGAGTACGGAGGTCGGTCGCCGTCACAGTGTACCAAGTATACCCTCTGGTTTTATACCCACTGTACCAGCGAGCAATCCAGCTTTCCTTTCGCAACTGCCAAACACTCCAGGCAAGTTCCTACCAGTGTTGGATCCCATGTACTACTCTGCCTTTTACAATGGCTTGTTCCCACCACCGATACCGCCTGCAGCTGCAACGTCCTTTATACCACCGGAGTTCAGCGCTTACTACAAGGAACTATTAGCTTCCTCGCAACCAAGACTGGGGATGGGAGGGCAGCATCAGCCTGCTGTACCGACATCCAAATAG
Protein Sequence
MCSIKTCLIDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREVSYPSSPTPTSSPESSPPRHEMPQLQVLTDPGIDFSDVDKQQKEYESNLSSSKKSERGGQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSVAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASSSKCAPTNLSQQVVPAAVGRPPSTGVRRSERKTSAEEKKFITDVQNFMSSRGTPVGKMPLLGYRQIDLFLFYTKVQTLGGYDSVSAGRLWKAIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEESKVRLTHGRRTKTSSISDNTVDGDQETSDSRSSETPPLAETPPVNTAPPLQPVLSASSFPTNEKPKSEVGKTSSLRSVRVKPERLKSLNTMIANTTPPTSQQTSQLPSPPPSSNTPISTPSSTPSTTPTIVTGNQSVLERQLNSPLVSQQVPPSCSSPGLPVSTVAMNATAVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGEKPIFTEKTIVPPRSPEVIDLETESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPTVIQSSVTPTPTSVKPEEKLPISYPLPVTPNSMPKLISVTVTPDIGHMLPSPQENQSNHHHHHHQQHQSRLQSQGKQHPVHHNNNNSTTNNNNNTTNSKVINLGSSNNAGLLQLYANANMVPASANPVVNSNHRFAPPNVPNGRILPPKVTQSRSIFAHNEKMVYGNPKDIPIPSKYRPPPRVQPQLIGNSDFTGNGEVLDLTQKPNEKATYSRPSLEIVRVPVVPRPNPLNLETRKSPTNKDRPTDCTTKRASFPGYQTVLDSRTMASNNLEITLVNPKQKNNHSNVPPPSHVQIPSPPNRTSNHPSVAQRRQINGKYAARSEPVSPYTPRKPTHPIIPNVPNLNHLNSMNSTYPRMTNVQQQVATIDRRKAIEGGKDQHHRRISENDKLSAMQQHHQQQDMRQSTEVGRRHSVPSIPSGFIPTVPASNPAFLSQLPNTPGKFLPVLDPMYYSAFYNGLFPPPIPPAAATSFIPPEFSAYYKELLASSQPRLGMGGQHQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01512633;
90% Identity
-
80% Identity
-