Vcra004366.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vespa crabro
Gene Symbol
tfip11
Assembly
GCA_025728115.1
Location
JAITYU010023781.1:22060-25319[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-97 9.3e-94 313.7 17.9 1 275 400 667 400 667 0.98
2 2 0.00046 3.3 6.9 0.4 242 273 679 710 670 712 0.89

Sequence Information

Coding Sequence
ATGTCAGAAGACGAAGTAGAAAGTTTCGAGATCAGCTATGATTTTGAAAATGAATTTAATATAAATCGTCCTAGACGAAAACTTTCTAAAAAACAGCAGATGCTCGGTATTTGGGCAGATGATAGTGATGAAGATGAACTTTCTGCACGACCTTCTTTCAAAACATATAACAAAGGGCCAAAAAATTATACAGTTCCGGTTAATTTTGTTGCCGGAGGTATTCAACAAGCTGGTAAACCACCAGAAGAAAAAgaggataaagaaaaagatgatgatgatgatgatgatgatgatgatgatgacacaaaagcATCTCAAAGAGATGGGGAAGGATATTTTAATAGTTCAAGCTCAGAGGATGAAAAACCAAGTAATTCTAAACAACGTACGTCATTCTCATTAAACGTAGAAGGAGATATTGCTGGATTACGTAAAAAGAGATATCAAGTAAATCCTTCATTCATGAAAAGTGGTGTGGGTAGTTGGGAAGTGCACACAAAAGGAATTGGAGCCAAATTGTTATTACAGATGGGTTTTGAACCTGGAAAAGGGTTAGGTAAACAATTACAAGGTATAAGTGCACCAGTAGAAGCTCATTTTAGAAAAGGTAGAGGTGCTATTGGTGCATATGGTCCAGAGAAAGGACCAAAAGTAGTTGAAAAAAGGAAAGAAGAAGCAGAGGATGTAAAGGATTCTAAGCCTAAAGTATCCCAATGGAGAAAAGGGGATAGCATTAGTAATAAGAAAAAAGTCAAATACTCATATCGCAGTGTTGATCAAGTTCTAGAAGATGGAAAATTAAAACCAAATAGAAAACTTCCACTTTCAAGTGAAATGAGTAGAGTGAAAGTTATAGATATGACAGGGCCAGAACAAAGAATTTTAAGCGGTTATCATGCAATAGCCGGTGGCCAGCAATATCCAGATGAAACTATACCAAGTGTTAATAAAAAGGATAAAATTAATTTTTCTTTGCCGGAATTACAGCATAATTTAAACTTGCTTGTAGATATGTGTGAACAAGATATTATACAGAATGATAGAAGAACAAGACATTTGAGTGATAGAGTAATAGCATTAGAAGCAGAGAAAAGAAATCTGTCCAAGGTTGTAGATCAACATGGACAACTCATTGATACTTTAGAAAATGTTCTAGCAGTTGTTGATAGATTAATGGACGAAACAAGTGAGATAACATTACAAGATACTGCTGATGTATTTAAAAGTTTGCAAGATAAGTATTATGAGGAATACAAGATGTATGAGTTGGGTGATTTGGCTACTAGTTTTGTGGGTCCAAAAATAAAAGATTCTTTACTTTCTTGGAATCCATTAATGCAACCAAAGCAGCCTATAAAATTATTTGAACAGTGGAAAGAAATATTAGAGACTGGTACAAGTCCACTTCAATCAAGAATAATACAACCTTATGACCAACTGGTTTGGAATGCATGGATGCCTTCTATAAGAGGAGCTGTGCAGCAGTGGACATGCAGGCATCCAGATTCGTTAATAGAGCTATTAGAGCATTGGATACCATTGTTACCTGGTTGGATATTTGAAAATATTTTAGATCTATTAATACTTCCTAAACTTACTTTAGAAGTAGAAGAATGGAACCCCCTCACAGACACTGTTCCAATACATACATGGATTCATCCTTGGCTACCATTAATGCGTAATTGGTTGGATACATTAATATATCCTATTATTAGACGTAAACTTGGTTCTGCTTTGGGAGGTTGGCATCCGTCAGATAGATCAGCAAGATTAATGTTACAACCTTGGGCAGAAGTATTTGCAAAGGGTGATATGGAAGCTTTTCTAGTGAAAAATATTATACCAAAACTTCAAATAGCTCTTTCCGAGTTTGTTATAAATCCACATCAACAGCATTTGGATCAATGGAATTGGGTAATAGAATGGAAAGAATTAATACCATCCCATATAATGGCGAATTTACTTGATAAATTCTTCTTTCCTAAATGGGAACAAGTTTTGACTTTTTGGTTAAATCATTCTCCAAATTACGATCAAGTCATGAACTGGTATATGGGATGGAAGGGAATGTTGAGCGATAAATTATTGGCAGAACCATTAGTGAAAGAACACTTTAAAAAGGCGATCGATATGCTAAATAGAGCCGTGGCTGCACCTCCGAGTCATCAACCAGGAGCTGCTATGGACCAAGTTTCATACTTGAACAATTTGGAGAGGAATCAACCGACGATAATATCATCAGTGGTACAACCGAGGATGGAGAGGTTGGCAGAAGCAGTGAGAATAGCAGCACCACAAATTCATTTAGGCTTTAAAGATCTCATACAGAGAAAGTGTGAAGAACGAGGTATCCTTTTCATGCCTATTCCAAATAAATATAGGGAAGCGAAGCAAGTTTACAAAGTGGGTAATGTCCAAGCATATATAGACGGTAAAATGATATTTGTTTATCATAATGGAACCAATTGGACGCCGACGAATGTGAACGCCTTACTCGATATGGCGGAACTTTAG
Protein Sequence
MSEDEVESFEISYDFENEFNINRPRRKLSKKQQMLGIWADDSDEDELSARPSFKTYNKGPKNYTVPVNFVAGGIQQAGKPPEEKEDKEKDDDDDDDDDDDDTKASQRDGEGYFNSSSSEDEKPSNSKQRTSFSLNVEGDIAGLRKKRYQVNPSFMKSGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHFRKGRGAIGAYGPEKGPKVVEKRKEEAEDVKDSKPKVSQWRKGDSISNKKKVKYSYRSVDQVLEDGKLKPNRKLPLSSEMSRVKVIDMTGPEQRILSGYHAIAGGQQYPDETIPSVNKKDKINFSLPELQHNLNLLVDMCEQDIIQNDRRTRHLSDRVIALEAEKRNLSKVVDQHGQLIDTLENVLAVVDRLMDETSEITLQDTADVFKSLQDKYYEEYKMYELGDLATSFVGPKIKDSLLSWNPLMQPKQPIKLFEQWKEILETGTSPLQSRIIQPYDQLVWNAWMPSIRGAVQQWTCRHPDSLIELLEHWIPLLPGWIFENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMRNWLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAEVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVIEWKELIPSHIMANLLDKFFFPKWEQVLTFWLNHSPNYDQVMNWYMGWKGMLSDKLLAEPLVKEHFKKAIDMLNRAVAAPPSHQPGAAMDQVSYLNNLERNQPTIISSVVQPRMERLAEAVRIAAPQIHLGFKDLIQRKCEERGILFMPIPNKYREAKQVYKVGNVQAYIDGKMIFVYHNGTNWTPTNVNALLDMAEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01513470;
90% Identity
iTF_01513470;
80% Identity
-