Basic Information

Insect: Vanessa tameamea
Gene Symbol: -
Assembly: GCA_037043105.1
Location: CM073294.1:11084467-11088995[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.45 33 5.6 1.9 1 23 216 238 216 238 0.96

2 20 4.3 3.1e+02 2.6 0.1 2 23 278 300 277 300 0.91

3 20 2e-07 1.4e-05 25.7 1.3 2 23 323 344 323 344 0.97

4 20 0.0011 0.08 13.9 2.4 1 23 353 376 353 376 0.93

5 20 0.066 4.9 8.3 0.1 1 23 382 404 382 404 0.93

6 20 1.6e-05 0.0012 19.6 1.6 1 23 410 432 410 432 0.98

7 20 3.4 2.5e+02 2.9 0.9 1 11 438 448 438 452 0.85

8 20 1.3 92 4.2 3.1 1 23 576 598 576 598 0.95

9 20 2.3e-05 0.0017 19.1 2.8 2 23 605 627 604 627 0.92

10 20 2e-06 0.00014 22.5 2.1 1 23 633 655 633 655 0.98

11 20 3.1e-07 2.2e-05 25.1 3.4 1 23 661 683 661 683 0.98

12 20 0.0082 0.6 11.1 4.3 1 23 689 711 689 711 0.96

13 20 2.9e-05 0.0021 18.8 4.5 1 23 717 739 717 739 0.96

14 20 0.025 1.8 9.6 4.7 1 23 745 768 745 768 0.89

15 20 0.15 11 7.2 0.1 2 23 838 858 838 858 0.93

16 20 1.7e-05 0.0013 19.5 0.3 1 23 863 886 863 886 0.95

17 20 6.9e-05 0.005 17.7 0.6 1 23 892 914 892 914 0.92

18 20 4.6e-05 0.0034 18.2 0.3 1 23 920 942 920 942 0.98

19 20 0.00016 0.012 16.5 0.1 1 23 948 970 948 970 0.95

20 20 0.0022 0.16 12.9 0.1 6 23 980 997 979 997 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.45	33	5.6	1.9	1	23	216	238	216	238	0.96
2	20	4.3	3.1e+02	2.6	0.1	2	23	278	300	277	300	0.91
3	20	2e-07	1.4e-05	25.7	1.3	2	23	323	344	323	344	0.97
4	20	0.0011	0.08	13.9	2.4	1	23	353	376	353	376	0.93
5	20	0.066	4.9	8.3	0.1	1	23	382	404	382	404	0.93
6	20	1.6e-05	0.0012	19.6	1.6	1	23	410	432	410	432	0.98
7	20	3.4	2.5e+02	2.9	0.9	1	11	438	448	438	452	0.85
8	20	1.3	92	4.2	3.1	1	23	576	598	576	598	0.95
9	20	2.3e-05	0.0017	19.1	2.8	2	23	605	627	604	627	0.92
10	20	2e-06	0.00014	22.5	2.1	1	23	633	655	633	655	0.98
11	20	3.1e-07	2.2e-05	25.1	3.4	1	23	661	683	661	683	0.98
12	20	0.0082	0.6	11.1	4.3	1	23	689	711	689	711	0.96
13	20	2.9e-05	0.0021	18.8	4.5	1	23	717	739	717	739	0.96
14	20	0.025	1.8	9.6	4.7	1	23	745	768	745	768	0.89
15	20	0.15	11	7.2	0.1	2	23	838	858	838	858	0.93
16	20	1.7e-05	0.0013	19.5	0.3	1	23	863	886	863	886	0.95
17	20	6.9e-05	0.005	17.7	0.6	1	23	892	914	892	914	0.92
18	20	4.6e-05	0.0034	18.2	0.3	1	23	920	942	920	942	0.98
19	20	0.00016	0.012	16.5	0.1	1	23	948	970	948	970	0.95
20	20	0.0022	0.16	12.9	0.1	6	23	980	997	979	997	0.99

Sequence Information

Coding Sequence: ATGAGTGATTTATCAGACATTTGTCGTATTTGCGGCGCTAATAATCTATCTCTCATCCCATTGTTTGGCCAGGATGCACAGAAAAAAGAACTTgttgagaaaataaataaatatttaccaataatGGTGCACCAACAAGACACATATCCTCTGGGAATATGTCAATCATGTGCTAATACAGTGCTAAACTGGCATGAACTGGCACAATGCTGCATTAAGACTGAAAAAGCGCTGACTTTGAAGCTGAAAACGAACACACAGACTGTCAAATGCAGTGGACACCATAACAATGTACAAGGGAGTTGTGGTCCAGCGGCTACACATGGAGAGGCTCATGAGAGGTTATCAGCcccttgtttaattttaataataaaagaagttCTGAACAATGTATACTTCAAGATAATGAATATGGATGAAGAAAACTCTGATTTAATATATGTCTGCCAAATGTGTCCCGACAAAGCTGCTTCAACATCAGTAGACTGCCTGTGTGATCATCTGATAGCAAATCACAACCGAGAACTTAATGATAAGGCATCAGTTGAAGCGttcataaaagaaaacattacatTCGAAGAAGTTCTGACAAACGATAGCGTAACCGATGATGAGTCGGAGGATCAGGTTGCAGATAtaccaaattatttttgtcCTTTTTGCGAAAGTGCATTTTCGTCGCCGACCCGCCTCATATGTCACTTGAACAAACACATCGAAGTGAGCATCGACGATGGAGTTCTCTGTTGTGATCATCTGTATGCTGATAAGAAGTCTTTCGTTTCACATTTGCAAGATAAACATGTAAACAGATCAACAGAGGGAGCTCTGATTTGCAAAAGTTGTGGTTTAGTGGAGAAAGATCACGACGCCTTGGCCGTTCACGTAAACGAGAAACATGCCAAAGTTAAGGACCCAAAGAAGAAGACGGAACCGAATCTCAAATGCCAGAAGTTCATACCGGCCGTGTGCCCGGAGTGCAACAAATCGTTCTCTAACAAATACAACATGCTTACTCACATGAAAACCCACACAAGTGAACTCTCTACTAGTAAATTCATGTGCATCAAATGTAACAAAACTTACAAGAGCCGCGGCAGCTTGACGTATCACCAGAGGGTGTTCCACGAAGGGTTGCTTCCGTTTCTATGCTCCATGTGTGGGGAAGCGTTTCCATCGCGTATGGCCAGAGACACACACGCACGCATTCACACGGGGTCGAAGCCGTTCACTTGCGATTACTGTAACAAGTCTTATCGCGCCCAGAACACCTTGCGCCGACATATAGACATGCATCTGAACATACGGAAGTATGAATGCCACCTGTGTCCCAAGAGATTGACGCCCAGCTGCGACGTTCCGAATATCGGCAGTTTTAGTGAACAGAGAATAAAGGAACACGACTCGCACGAGTCCGGGGGCGGCGCTTCTGATGACGACCGACCTCTCGCAAGCATAGCCAATAGAAATACCAAAATAGATCTTTACCAAAAATTTTATACTGCCCTTGTAAACTTTAGAAATCACTTCACGAAGGAACACGACTGTCACAACTATTCCGACTTCTCAGATTCTAGCTCATCCGATAACGAGGAGACGGGGACGCAGGAGAGTTTAAACAGTTTCGATGACTTGACGCACAGCAACATGAGGAAAGACAAGATGGATGAGGAGACGCGCCTCGAGCTCAGTCAAGTGCAAACGAAAATAAACGGGAAAGTTTATTTTACGTGTGCGACGTGCGGCAAGAACCTCAGCTCGACACACACTTACATATTCCACAAACGCATACACACGGGGGAGCGGCCGTGCGTGTGTCACATATGCGGGAAGCAGTTCCGCACGCCGAACGGACTTCAGAGGCACCTGACCGAAACCCACGAGAAGCAGCGCCGGTACATCTGCGTCATGTGTCACAAAAACTTCGCCAACTCGCAAAACCTCAAGCAACACATGAGGATCCACACGGGCGAGCGACCCTTCGTGTGTCCGCACTGCGGCAAGCGCTTCACGCAGAGCGGCTCGCTGCACGTGCACCTGAAGACCCACAGCGAGCACTACCCGCACCACTGCGCCGAGTGCGGCGCCAAGTTCCGCCTGCGCTCCGGCCTCACGAGGCACCGCTTCAAGCACACGGGGGAGCGCCCGCACGCCTGCGTGCACTGCGGGAAGGCCTTCCGCCAGAAACACGAGCTCAACAGCCACGTGCTCACGCACTCCGACACCAAGCCGCACGCCTGCGCCGTCTGCGGCACCGCCTTCCGCCAGCGGCGAGCTCTGCGGCACCACTGCAAGCGCCTGCACGAGGCCGACGCCAGGGACGCGACGCACGCGCTCTACGGACACGCGGGACACTACGAGGAGCGTTCGTTCGATTTGCTTTTCAGCGCGGTAGGTACCCCGAAACTCGAGCAGGCGCCGGAGGCCGAGGCGGGCCCGACGGAGGACCGGGCGGAGGCGAGCGCGGAGCGGCCGAGGACGATAGTGATCGAGGGCGGCCGGCGCTACGGCGAGTGCGGCGTGTGCGGCAAGCGCGTGCGCACGGCGGGCTGGCGGCGCCACGCGCGCTCGCACGGCGCCAAGCGCCACAGCTGCCACGCGTGCGGCCGCGCCTTCGCCGACGCCGCCAACCTGGCGCGCCACCTGCGCGCGCTGCACCGCCGCCTGCGCCCGCACGCCTGCCCGCTCTGCCCGCGCCGCTTCTCGCGCGCCGGCCACCTGCGCGACCACGTGGACGCGCACTCGGGCCGGCGCGACCACGTGTGCGACGTGTGCGGCAAGGCGTCCGCCTCGCGCGCCGCGCTGCGCATGCACCGGCGCACGCACGACGCGCGGCCGCGCCACGCCTGCGCGCTGTGCGGCGCCGCCTTCAAGCGCCGCGGCCAGCTGCAGGCGCACGTGTCCGTGCACACGGGCCAGCGCGACCACGTGTGCGCGTGCGGGAAGGCCTTCCGCCTGCGCAGCCAGCTCGCCGCGCATGCGCGCCGCCACGTCGCCGCCGCGTCGCCGCCGCCCGCTGACCGCCCCGTCCTAGCGAGCCCCGCTCGGTTTCGGACGACGCTGAGTGCGAGAGGTCCGTGCGCGGGAATGAAATTGACTCGCGCACTCGTCGACTTGCCAGTATATCCGGTGGTACTGAATATATTAGAAGCACTCACCCGATTCACAGTAATACACATTCAACTCATAATGTCTAACCGCCCGCCCCGGGTCCACTGGCCGGCAAACGAGTGCTGCCCAACCAGTCATACCGCTAGCGCCGCTGCACAGACGCGGGCGCAGGAGCGCCTCCCGCGTGCTCCGCCTGCAGGACTGGACGGCCACACGCATCGCCACATTGCGTTGTAA
Protein Sequence: MSDLSDICRICGANNLSLIPLFGQDAQKKELVEKINKYLPIMVHQQDTYPLGICQSCANTVLNWHELAQCCIKTEKALTLKLKTNTQTVKCSGHHNNVQGSCGPAATHGEAHERLSAPCLILIIKEVLNNVYFKIMNMDEENSDLIYVCQMCPDKAASTSVDCLCDHLIANHNRELNDKASVEAFIKENITFEEVLTNDSVTDDESEDQVADIPNYFCPFCESAFSSPTRLICHLNKHIEVSIDDGVLCCDHLYADKKSFVSHLQDKHVNRSTEGALICKSCGLVEKDHDALAVHVNEKHAKVKDPKKKTEPNLKCQKFIPAVCPECNKSFSNKYNMLTHMKTHTSELSTSKFMCIKCNKTYKSRGSLTYHQRVFHEGLLPFLCSMCGEAFPSRMARDTHARIHTGSKPFTCDYCNKSYRAQNTLRRHIDMHLNIRKYECHLCPKRLTPSCDVPNIGSFSEQRIKEHDSHESGGGASDDDRPLASIANRNTKIDLYQKFYTALVNFRNHFTKEHDCHNYSDFSDSSSSDNEETGTQESLNSFDDLTHSNMRKDKMDEETRLELSQVQTKINGKVYFTCATCGKNLSSTHTYIFHKRIHTGERPCVCHICGKQFRTPNGLQRHLTETHEKQRRYICVMCHKNFANSQNLKQHMRIHTGERPFVCPHCGKRFTQSGSLHVHLKTHSEHYPHHCAECGAKFRLRSGLTRHRFKHTGERPHACVHCGKAFRQKHELNSHVLTHSDTKPHACAVCGTAFRQRRALRHHCKRLHEADARDATHALYGHAGHYEERSFDLLFSAVGTPKLEQAPEAEAGPTEDRAEASAERPRTIVIEGGRRYGECGVCGKRVRTAGWRRHARSHGAKRHSCHACGRAFADAANLARHLRALHRRLRPHACPLCPRRFSRAGHLRDHVDAHSGRRDHVCDVCGKASASRAALRMHRRTHDARPRHACALCGAAFKRRGQLQAHVSVHTGQRDHVCACGKAFRLRSQLAAHARRHVAAASPPPADRPVLASPARFRTTLSARGPCAGMKLTRALVDLPVYPVVLNILEALTRFTVIHIQLIMSNRPPRVHWPANECCPTSHTASAAAQTRAQERLPRAPPAGLDGHTHRHIAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01506534; iTF_01507416;
90% Identity: iTF_01506534;
80% Identity: -