Vtam018818.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vanessa tameamea
Gene Symbol
egg
Assembly
GCA_037043105.1
Location
CM073305.1:1020386-1051408[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3 9e+03 -3.2 0.0 29 38 1499 1508 1473 1509 0.65
2 2 4.3e-13 1.2e-09 38.1 0.0 4 75 1540 1604 1537 1606 0.89

Sequence Information

Coding Sequence
ATGTCTTCACCAAAAAATACGGAAATTGTTAGTGATAAAGATGATGGGGAAGCAATGGCTTCTATACAATTAATAGTAAAAGATACAATTAAGTCGATTGATTTAGAAGAAAATGCAAACACGAATGTTGTAAACGACGAAGGGCTTTCCAGAGGATCTGTAGAGGACGATGAAAACAGTTCTTCGATTGATAAAAACGTCGAAGAAATGTTGCTTGCTGATGCTAACCAGAATCCAGACAGTGACAATGTCGATGATGAAATGGAGCTAAGGTGGGATGACGATGACCTGGACGATGTAGATGAAATAAAGAATGAGGAGACTTTGCTTGAAGAAAATTCGTTAGATTGCCCTAAACCTTATACTTTATCTTTGCAAGAGGAAGTCATTAAAACCATTGAAGCAGAAGAGAAGCTTCTGAATTTAGAAAACGATAATGAATCAAAAGAATCACCCCCAGATTCTATAACAGAGAGCTTATTTGCACCCAAAATAGATCACAATTTAAACAAACCTGATATGATGTTAGAAATTCCGAGTCATGAATTGATTGAATTTAGTGACGATGATGAGGATTTGACTAATAATCTTGAAATGTCTCCTGACTTAGAAAGTGATGAAGAAATGTCTAATTCAACTGAGGTACCAGTGCAGTCAACACAAGTTGATATCCATGCGGGTGGTGAGGTACAAAAAGAAGCAGAAGAAAATCCATTAATTGataaagaattaaaagaaaCAATGGATTATAAGGCATTGGAAAATGAAGCTAAATTTGCAGCAGACATTCTCACTAAAGAGCTTAATGCTATGGATTCAGAATCAAATATTATCACAGACACTAATACAGATATGACTGAAGATTTTCTCTTAAAAGAAGACACAATGGAAGACGATTGTCTTTTAAAAGATGACATAATACAAGAAGATTGTCTTTTAGAAGAATCTACAGTCCAAGAAGAAATCATTGATGATGGTAACAGTGTAAACAGTGAATCAGAtctaaataaagataaagacCAAACAAAAGCACCACTTGAGATCCAAGGTAATTCAGATGCTAAGAATACAGCCAATGAAACAGAACTACAAAACGAAGATACACAAAGCACGGAAGAAGATATAACTGATTTGTGTGAGGATATATTGCTAGCACCTAGTGATGATTCTTTAGATGCTATGGATTGTGTTCCTGATTCAGAAATTAAAACATCTTTTAAATCTGAAGCTATTGATTCAACTATTAATACAAAAGACACCAATATTCTAGAAACAGATTTAGACACAAatgtaattaaagataaaacaacaagcacaaatgaaaaaaaatctataacagAAACAGATATTGTGTCTGAAACTGTAGAACCTGAAACTGATCAAATAACATCACTGTCTAATTCAactaatggaaataaaaaaccaGACACAGGCTTGACTGATACTGTCCCATCAATTGAAGATTCAAAAGAGGAAGAAAAAAGCATATTAGATGAGAAAACTGATTTggaggaaaaaaataaaattgaggaCGAAAATACTGAGGTAGTAACACACACAgaagatataaaacaaattactaaAGATGAAGTACCCAATCTTTTACAATCAACAATATCAACAAATGAAGGTCCATTTACATCGGAACCTAATCTAGATTTACAAGGAGATAAACCTGAACTACTTAAGTCAAAAACTTCTGAGAAAATCATTGAAGATGCACAAATTGAAGTAATCCCAGCACACACAATGGATGTTAATGAACCGCAACCATCAACATCTTTCGCTTGCTCTGAAACATCAAAAGGTACAACCGAACAATCATCAATGTTTGGCTCATCAATGGTACAAGATACATCCAAAGATGTACCAGAAATGACGGACAGTCTCGGACTTTTGGCTGAGTCATGTAGAATGATGGAGGAAGATGAAGAGCAGgaatatgatgatgatggtgatgggGAAGATGAAGATGATTTTGACCAAGATGATGAAAGCAGCAATCAAATGACCGCAGAGCATTCAGAAGATTCAAACGCTCAGCATTCGGAGTCTGAAGTGCAAAAAGACTTGCAAACTGAGTTCACAACGGCTGACATGATTTCGGAAGTTGAGAAAACTGATAATATGGCAATTGATGATACTAAAACTACGGATTTGCAGGAAACTAATGGAAATGATGTTGAATTGCAGTTAGAAAATGATgataaaaaacaaaaccaagAGATGGACATCGAAACGGTGAAACTGTCAGACACTTCAGATGTGGAAATCGATTCGGAGAACGGAGAGACtactatactaaaaaaattattgttaaaaacaacaGataCACTTTTATCGGAAGATGTTGTAGAAGAGAAAAGATCTCCGAGCAAATCTAAAAATTTGGAAATAGTAAAGCAGGAGACGTTTATGAGTATTGTTGACCTTGAGGAGAGCTCCTCGGAGGACGATGTTAAAGAAATGAAGGTAGAAACTGCAGCTATACAAGAAGAAGTAGACGCGACTAAATCTGATGAGTCCGGCATTACAACTGTTGACGCAAATGTTGGAGTTAAAGACGAAACTATTGACGGTGGAGTGAAAAAGTCACCATCAAAAACTGTAACACCAGATAAAGTAGACGAATCGAAAACACCCCCCCATGGAGATCCAACCGTAGTTAGTCAAGAAAGCAAGcCGAAGGCTCCAATGGGTTTAGAAGTTTTCAGCCTCGATTCCGATGAAGACGAACAAACTGTACCTCGAGAAGTTGCTGAGGGTTCGCAAGCAGAACAAAGTCAGGATGTCACAGAAGAGACGAAGGGCGAAACACTGAAATGCATCAACAGGTCATGCCCGGGCGACGCTGGCGTTGAATTCTACATAGCTGACAACGAAGCGATTAACTTCTTCGACGCGGACAAGAAGAAGCGCGGCTACGTGTGCCGGAACTGCTCTGATGCTGTGGAGAAACGCAACCAGGAACTCATAGACGGTATCAAGAATTTCACTCCGCTCCTGGAACTGGGTATCAACAGGAGCGGGGAGGAGTTGGTCGAGATATCAGACTCGGAGTCTGAGGATGAACCCGAACTCGACCAGGATCACGTGCAGATCATCGGGGCAGAAGGCGCCAAGATAGCGGAGGAGAATCTCGCTTTAATGATAAACGAGACGTGGGAGAAATTCAAAATGGACGAACGTTTGACGGACACGCAGAACACGTTGCAGAAAGAAATGGAAAAACTGCAAAaGGAGAGCGAGGAAATCGACGAACTCCTCAATGAATGTCAGGTAGCGACGGACCAGCTCCGGAACGAGCTGTACGCGACCTTCGAGCCGGATATCCGGGAACTGCCGCCTTTTGTCATATACGATATGCCGAACTGCTCGCCGACCCCACTGAAACGAACTCGTTCCCCGTCCAAAGAGGTCCCGGCCAAGCGCCCCGCTATACCGCTGGGGTATGCGCCGTTAGATGGAAAAAGTAGCGAGGAATCGAAGAATATAACAGTGGCGAGCGAAAAGGCAGAGGACGATaATACGGACGTGTCCGTCGTAAAGCTGTCCGCGGAATCGGCGCCGAAGGACCTGCCCCCGCCGGGGGAAGTCACGATGACGCCCCTCAAGGCCGGCACGACGGTGTACGCAATGAAGAACGCCTTCGGTTCCTGGCTCAAGGCGAAGATCGTTGACATATTACCGAAGCCAGCTAATTCAACGTTCACCCTGTGTCGTGTTAAATTTGAACACAAAGTGACGAAGAACCTGTACAAGATCTTGCCGGCGAGATGCCTGGCGTACTACGAGCCCCCTGACGTTCGAATGACAATTgGTCGTCGTGTTATAGCACTTTTCAAGGACACGAATAAGCGTGAGACGTACTACTCGGGAATCGTAGCCGAAATACCAAATCCGGTTAATTCTTATCGCTACCTGATCTTCTTCGACGACGGCTACGCGCAGTACGCACAGCACGCACAGACGCGCCTCGTGTGCGAGTGCTCGTGCTTCGTGTGGGAGGAGGTGCACCCCTACTCGCGCGAGTTCGTGCGCCAGTACCTGTTCGCCTACCCCGAGCGACCCATGGTGCGCCTGCACGCCGGGCAGAACCTCAAGACCGAGTGGAGGGGCAAGTGGTGGTCGTCGCGCGTGGTGCGCGTGGACGCGTCGCTGGTGGAGGTGCAGTTCCTGCGCCGCGACCGCCGCGAGTGGATCTACCGCGGCTCCACCCGCCTGGCGCCGCTCTACCTCGAGCTGCAGGCGGCCGAGCGCCACCGCCCCCGCGCCGTGCCGCGCGCGCAGCCGCAGCCCCGGACGAACATGCCGTACGTGGAGTACACGCGATCGGATGAGCAAACCAGCAAGGCCGAGCCGCAGTCTccgcagcagcagcagcagcggCCGCAGCAACAGAATGAGGAGATGCGTCGCCAGCGTGCGGTCGCGAAGAAGTCGACCACCACCGTCCAGACGCCGCTGCCGCCCAGCGCAGACAACCTCGACAACGTCACCAGCAGAGTGGTGTATTACACGCCAAAGAACGCGGTGAAACCTTACAAAATGGTACCGCATACATGCTCGCCGAAATGCAAGAGGACAGACGTCCTGGCACTCAAAGATCTCCGAACCTACAACCCTTTGGCGAAACCGTTACTGAGCGGCTGGGAAAGGCAGGTGGTGCGCTGGAAGGGCCAGCGCTGCGTGCTGTACGTGTCGCCGTGCGGGCGGCGCACGCGCGACGTGCGCGAGCTGCACGCCTACCTGCGCGCCGTGCGCTCCGACATGCCCGTCGACCTGTTCGACTTCTCGCCCGCCACGCACTGCCTGGCCGAGTTCGTGCTCAACAAGTGCTTCGTCGGCAAGAAGGACCTGTCGCACGGCAAGGAGAACGTGCCGGTCCCGTGCGTGAACTACTACGACGAGTCCCTGCCGGAGTTCTGCTCGTACAACACGGAGCGGACCCCCACGGCGGGCGTGCCGCTCAACCTCGACCCCGACTTCCTGTGCGGCTGCGACTGCGACGACGACTGCGAGGATAAAACGAAGTGCGCTTGCTGGAAGATGACTCTAGAAGGTGCTAGAACGATCGGTCTGGAAGGCGATAATGTTGGCTACGTGTACAAGAGGCTGCCGGAGCCCTTGCCATCGGGCATTTATGAATGCAACTCCAGATGTAAATGTAAACACACGTGTTTAAATCGCGTCGCGCAGCACCCGCTACAGCTTAAGTTACAAgTATTCAAAACTCTGAACCGAGGCTGGGGTATAAGGGCCCTTAACGACGTGCCCAAGGGGTCATTCCTTTGTGTGTACGCGGGAAATCTGCTCACAGATGCGACGGCGAACTtgGACGGTCTGAACGAGGGGGACGAGTATCTGGCCGAGTTGGACTACATCGAGGTCGTGGAGCAGATGAAAGAGGGCTACGAAGAAGATATACCGGAGAGCATCAAGAAGCTCGATAAGAAGGAACTAGAATCAAAGGCCTCGGAAGAAACTGAGGAAGATGAACAGTCTTCAGACGAAGAGATGAGTAACAACAAGACAGATCTAGAAGACGACGACTTCGAGCCGGGACATATTGGTCTCGGCCTCGCTGAGTTCAAtaaacGTTTACGAAAAAGGGAATCCAAGAAAGAGAAGGAGAAGGAAAAAGAGGAGGCGAATCAAAAGGAAGGTGATAAAAAGGATATAAAGGAGGAAAAGGAAGCGAATCCAGATGAGGAGTGCATTACCATCAGTGATGATGAAGAAGTGAGAGAGCCGTCTTGCTTCACGGCGGCCGCTGGTATGGGTGCGAATGAATTTGTATCTAAATACAGATCAGTCCGTACGCTGTTCGGAGAAGACGAGGCGTGTTACATCATGGACGCGAAGGTCCAGGGCAACATCGGGAGATATCTTAATCACTCGTGCTCGCCGAACGTATTCGTGCAGAACGTGTTCGTGGACACCCACGACCCGCGCTTCCCGTGGGTGGCGTTCTTCGCGCTGAGCCACATCCGGGCCGGCACGGAGCTCACCTGGAACTACAACTACGACGTGGGCTCCGTGCCCGGCAAGGTACTCTACTGCCACTGCGGAGCCAGCAACTGTAGGGGGAGACTGCTGTAA
Protein Sequence
MSSPKNTEIVSDKDDGEAMASIQLIVKDTIKSIDLEENANTNVVNDEGLSRGSVEDDENSSSIDKNVEEMLLADANQNPDSDNVDDEMELRWDDDDLDDVDEIKNEETLLEENSLDCPKPYTLSLQEEVIKTIEAEEKLLNLENDNESKESPPDSITESLFAPKIDHNLNKPDMMLEIPSHELIEFSDDDEDLTNNLEMSPDLESDEEMSNSTEVPVQSTQVDIHAGGEVQKEAEENPLIDKELKETMDYKALENEAKFAADILTKELNAMDSESNIITDTNTDMTEDFLLKEDTMEDDCLLKDDIIQEDCLLEESTVQEEIIDDGNSVNSESDLNKDKDQTKAPLEIQGNSDAKNTANETELQNEDTQSTEEDITDLCEDILLAPSDDSLDAMDCVPDSEIKTSFKSEAIDSTINTKDTNILETDLDTNVIKDKTTSTNEKKSITETDIVSETVEPETDQITSLSNSTNGNKKPDTGLTDTVPSIEDSKEEEKSILDEKTDLEEKNKIEDENTEVVTHTEDIKQITKDEVPNLLQSTISTNEGPFTSEPNLDLQGDKPELLKSKTSEKIIEDAQIEVIPAHTMDVNEPQPSTSFACSETSKGTTEQSSMFGSSMVQDTSKDVPEMTDSLGLLAESCRMMEEDEEQEYDDDGDGEDEDDFDQDDESSNQMTAEHSEDSNAQHSESEVQKDLQTEFTTADMISEVEKTDNMAIDDTKTTDLQETNGNDVELQLENDDKKQNQEMDIETVKLSDTSDVEIDSENGETTILKKLLLKTTDTLLSEDVVEEKRSPSKSKNLEIVKQETFMSIVDLEESSSEDDVKEMKVETAAIQEEVDATKSDESGITTVDANVGVKDETIDGGVKKSPSKTVTPDKVDESKTPPHGDPTVVSQESKPKAPMGLEVFSLDSDEDEQTVPREVAEGSQAEQSQDVTEETKGETLKCINRSCPGDAGVEFYIADNEAINFFDADKKKRGYVCRNCSDAVEKRNQELIDGIKNFTPLLELGINRSGEELVEISDSESEDEPELDQDHVQIIGAEGAKIAEENLALMINETWEKFKMDERLTDTQNTLQKEMEKLQKESEEIDELLNECQVATDQLRNELYATFEPDIRELPPFVIYDMPNCSPTPLKRTRSPSKEVPAKRPAIPLGYAPLDGKSSEESKNITVASEKAEDDNTDVSVVKLSAESAPKDLPPPGEVTMTPLKAGTTVYAMKNAFGSWLKAKIVDILPKPANSTFTLCRVKFEHKVTKNLYKILPARCLAYYEPPDVRMTIGRRVIALFKDTNKRETYYSGIVAEIPNPVNSYRYLIFFDDGYAQYAQHAQTRLVCECSCFVWEEVHPYSREFVRQYLFAYPERPMVRLHAGQNLKTEWRGKWWSSRVVRVDASLVEVQFLRRDRREWIYRGSTRLAPLYLELQAAERHRPRAVPRAQPQPRTNMPYVEYTRSDEQTSKAEPQSPQQQQQRPQQQNEEMRRQRAVAKKSTTTVQTPLPPSADNLDNVTSRVVYYTPKNAVKPYKMVPHTCSPKCKRTDVLALKDLRTYNPLAKPLLSGWERQVVRWKGQRCVLYVSPCGRRTRDVRELHAYLRAVRSDMPVDLFDFSPATHCLAEFVLNKCFVGKKDLSHGKENVPVPCVNYYDESLPEFCSYNTERTPTAGVPLNLDPDFLCGCDCDDDCEDKTKCACWKMTLEGARTIGLEGDNVGYVYKRLPEPLPSGIYECNSRCKCKHTCLNRVAQHPLQLKLQVFKTLNRGWGIRALNDVPKGSFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEEDIPESIKKLDKKELESKASEETEEDEQSSDEEMSNNKTDLEDDDFEPGHIGLGLAEFNKRLRKRESKKEKEKEKEEANQKEGDKKDIKEEKEANPDEECITISDDEEVREPSCFTAAAGMGANEFVSKYRSVRTLFGEDEACYIMDAKVQGNIGRYLNHSCSPNVFVQNVFVDTHDPRFPWVAFFALSHIRAGTELTWNYNYDVGSVPGKVLYCHCGASNCRGRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01506365;
90% Identity
iTF_01506365;
80% Identity
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