Tdic013612.1
Basic Information
- Insect
- Trypoxylus dichotomus
- Gene Symbol
- tfip11
- Assembly
- GCA_014905495.1
- Location
- BNES01000053.1:2939630-2955802[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-99 1.2e-94 317.5 11.4 1 275 397 668 397 668 0.97 2 2 0.18 2.2e+03 -1.6 0.1 245 270 683 708 673 716 0.56
Sequence Information
- Coding Sequence
- ATGTCCGATGACGAGgtagaaaaatttgaaataaccgATTACGATATCGAAAATGAGTTTAATATAAACAGGCCACGACGTAGACCTACAAAACATCAACAAATATACGGTATTTGGGCCGACGAAAGTGACGGAGAAGAAGAAATTAGGCCCGCGTTTCGTACAAGACAGCCAAAAGGTTACACAGTGCCTATAGGATTTGTGGCAGGTGGAGTACAACAGcctggaaagaaaaatgaaaatagtgcTACTAAAAAAGAAAGTGACGAGTCAGAAAATGAAGGACCATCTACTTcgtttaaacttaaaaatagtTCCAGTGACTCTGAAGGTGATTCTTTACCAAGGACagGTTTTGGTAATCAAAGAGGATCTACGAGTGCTACAGTTACAGAAATAACTGGTGATATCGCTGGGCTACGAAAGAAAAATGCAACGGTTAGCAATACTTTGATAAATCAAGGTGTTGGAAATTGGGAGAAACATACAAAAGGTATTGGAGCAAAACTGCTATTACAAATGGGTTTCCAACCGGGAAAAGGTCTTGGTAAAGATTTACAAGGAATATCAACTCCTGTAGAGGCACATCTAAGGAAAGGTCGCGGTGCAATAGGTGCATATGGACCAGAAAAGGCTCCTACTATAGCACCGAAGAAGgatattaaagaaaaacctgATATTGAGAACTTAGAAAACAAATCCAAATGGAAGAAAAATGACATGGCCAATAAGAAAACACGTTATTACTACAAAAGCGTTGATGATGTTATTGAAAAAGGTAAACGTCCAGGAGCTTATAGAAATTGTGGACCTGCAAGTGAATTGAGCAAAGTAAAAGTTATTGACATGACTGGTCCGCAACAACGTGTTTTGAGTGGTTATCATGCTTTAAGTGGCCTGAAAGCACCTCCAGGTGTGGAAAGATTCGAAGATGTTATTCATAAGAAGTGTGTGAATTTTGCACTGCCAGAAATTCAACACAATCTTGATATATTAGTTGACATGTGCGAACAGGATATCATTCGAATTGATAGAAATTCAAGATTTAACCAAGATCGAGTAGTTACATTAAAGCAAGATGAAGTTACACTGAGGAATTTAATAAGTAGGGAAGAAAACCTCATTGACAATTTGAATTCTGTCTTGGAAGTTGTTAATAAACTTATGGATCCAACGTTAGGTTTATCACTTGGACAAGTGGCGAACATATTCTTAGATCTTCAGAAAAATCACTACGAAGAATATTATCAATATGAATTGGGGGAATTGGCACCAGGCCTCGTTGGTCCATTGCTGACTTCAGCACTCGCAAGTTGGTCACCGTTAAACGCACCTTCGCAATATACGGACGTCTTCGGTCAGTGGAAGGATATATTGGAGAAGCCGTTACAACGTGGGACACTAGAAGGTAATAGTATGGGGATTCAGCCGTATGATAGTCTCTTATGGCACACTTGGGTGCCTGTTATCAGATCATGTGTTAGtgATTGGAAGCCAAGAGATTGTGATCCACTAATACATCTACTAGAAACGTGGAAACCGCTTCTTGCTCCATGGGTTCTCGACAATGTTTTGGATCAACTGGTAATGCCACGACTTACCGCGGAAGTTTCAAATTGGGATCCACTCACAGACACCATACCGATTCATACTTGGGTACATCCATGGATACCACTCTTAGatACTAGATTACAAGCAAGTGTTTATCCTATAATTCAAGAAAAGCTAGGAGCTGCACTTACAAACTGGCATCCATCAGATAGATCAGCAAAACTAATGCTGAAACCATGGCAACGAGTACTCCCAGAAGGATCATTTGTAGCTTTCCTTGTGAAGCATGTTGTACCGAAATTACAAATGTGTATGCAATCGCTGGTAATAAATCCGCATCAACAGCCTTTAGAACCGTGGCATTGGGTGATGGAATGGAGTGATATGTTATCAGTTGGAAGTATGACGTTAATATTGGACAAATTCTTCTTCCCAAGATGGCTGCAAACATTAGCAATGTGGTTGAACCACAACCCCGATTACTCTCAAGTGACAGATTGGTATTCAGGTTGGAAAAGAATGATGTCCGAACAATTACTTGCACAACCTACTATTAAAGaaaaCTTCCACAAAGCCTTAGAAATGATGAACAGAGCTGTTTGCAGTGGACAACAGCCAGGTGCAAAAGAATCAGTATCGTACTTAACCAACATAGAAACGAATTTACCACCTCCGCCGCCGCCACCAAGAATTGATAGTTTCGCAGAAGCAGTTCGTACGGCAACTCAAATACTCCAAGGATTCAAAGATTTAATTGCTAAAAGATGCGAAGAAAGGGGTATTCTTTTCGTGCCCATTCCCAACAAATACCATGAAGCGAAGCAAGTTTACAGGCTAGGAACGAATGGAGTACAATGTTATATTGACCGAAACGTTGTcttttatacacaaaataatTCCACTTGGTTACCAACTTCCTTAAATAGATTATTAGATATGGTATAG
- Protein Sequence
- MSDDEVEKFEITDYDIENEFNINRPRRRPTKHQQIYGIWADESDGEEEIRPAFRTRQPKGYTVPIGFVAGGVQQPGKKNENSATKKESDESENEGPSTSFKLKNSSSDSEGDSLPRTGFGNQRGSTSATVTEITGDIAGLRKKNATVSNTLINQGVGNWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISTPVEAHLRKGRGAIGAYGPEKAPTIAPKKDIKEKPDIENLENKSKWKKNDMANKKTRYYYKSVDDVIEKGKRPGAYRNCGPASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVERFEDVIHKKCVNFALPEIQHNLDILVDMCEQDIIRIDRNSRFNQDRVVTLKQDEVTLRNLISREENLIDNLNSVLEVVNKLMDPTLGLSLGQVANIFLDLQKNHYEEYYQYELGELAPGLVGPLLTSALASWSPLNAPSQYTDVFGQWKDILEKPLQRGTLEGNSMGIQPYDSLLWHTWVPVIRSCVSDWKPRDCDPLIHLLETWKPLLAPWVLDNVLDQLVMPRLTAEVSNWDPLTDTIPIHTWVHPWIPLLDTRLQASVYPIIQEKLGAALTNWHPSDRSAKLMLKPWQRVLPEGSFVAFLVKHVVPKLQMCMQSLVINPHQQPLEPWHWVMEWSDMLSVGSMTLILDKFFFPRWLQTLAMWLNHNPDYSQVTDWYSGWKRMMSEQLLAQPTIKENFHKALEMMNRAVCSGQQPGAKESVSYLTNIETNLPPPPPPPRIDSFAEAVRTATQILQGFKDLIAKRCEERGILFVPIPNKYHEAKQVYRLGTNGVQCYIDRNVVFYTQNNSTWLPTSLNRLLDMV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464857;
- 90% Identity
- iTF_00956307;
- 80% Identity
- -