Tatt010496.1
Basic Information
- Insect
- Trypoxylon attenuatum
- Gene Symbol
- Hr39
- Assembly
- GCA_963989405.1
- Location
- OZ022491.1:17229793-17233664[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2 1.3e+04 -4.7 4.6 134 160 59 85 24 111 0.62 2 6 3 2e+04 -6.3 10.3 76 163 295 412 242 441 0.57 3 6 3 2e+04 -8.0 9.7 77 149 458 530 419 557 0.39 4 6 6.1e-08 0.0004 20.0 0.0 1 21 624 644 624 650 0.92 5 6 0.2 1.3e+03 -1.4 0.0 86 126 680 718 650 756 0.71 6 6 3.3e-71 2.1e-67 228.4 0.0 180 408 802 1026 769 1026 0.93
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGCCCAACGAAGGGCCTGGCCCAGGACCTGGACCGGGTCCTGGTCCTGGTTGGTGGCCGGCTGCACAACCTTGGAAGTCCACGTGTTCCGCTAGTTCTACCGCTGGCTCCTCCTCTGCCGGCTCCAGTGCGAACCCTGTCGTCTCTGCTTCCGTCTCTGCCTCCTGTGTAACTTCGTCTTCGCCAGTATCCAGCTCTGGTTCCACGCCATCGTCCTCGGCGTGCccttcttcgtcttccgtTGGTCCGTCCTGCACTATCACCCCCGCGCGCTCGAGCGAGGCTGGCAAAAACGTCTCCGTCACCACTATCAATGTGCCTCCCAATCAAGAAATGCATGATGGTAAGGGTGTATGTAAATATCGCGGAGGACAGAATGGTGTGACAGTGTCGGTAGTATCAAGCTGCGGCTCAGTACTGGGTTGCGGAAATGCGAGTGTGGCTTCAACAACCGATGTCACcagcagtagtagcagtaaCAGTGGACCACACAGCATTGGCATTGGCATTGGTGTCAGCATCCACGGTCCTCCGAACATCGCTGACATCGACGACGCCGACGATAGCGATGGCGAAATAAGCAAGATCGATTTCCGCGGTGTTAATTTGCgaacaaagaagaagagagatgcGTGTGGAAGTCAGAGTGGCGACAAGATCGGTGATGGTGATGTCGATACTGATGGGAACGGGTGTTGCGATGGAAGTGATAGCGCTCAACAGCAGCAACCTGAAAGACCTATGTCATGGGAGGGCGAACTATCCGACCAGGAAATGTCTTCTAATACTATCACCAATCAGGATCCTCATGAAGAAACTTCAATGGAAGGCGTTCAAGTTTGCGGTGCTAGTCCTGGACCCGTGGAACAAAAGTTTCCAATAAAACCGGAGCCGGACTTTCGGTCTAGTCCAGGATTCGCATTTGGCTCCTTCCACGAAGCAGGCCAACCATTACACAGTCAGCAGATGCAGCatcaacaacagcaacaacaacgtGGTATTGAGAACCTCGAGCAAGCCCAACAGAGTGATTTGCCTCTTCTGGTAGGAAAACTTCTGGGAGGATACAATAGTTCAACTCCCAATCATAGTCCAGTTCTCAACCCAAGGCATCATTTGACCAAGCACAGCCATACCAGATCACAGGTTCCATCACCAGATTCCGCTATACACTCTGCATATAGCGTATTTAGTTCGCCAACACAAAGCCCGCATGCGGCCAGACACTCTGCTCTTGGCGCGGGCAGTCCGGTACCGTCCTCGTCGCTGTCCCTTTCCCGGCACAGTTTCAACAATTCTACATCCTCTCTATCATTGTCGCTCTCGCATTCACTCTCAAGAAACAATTCGGATGCGTCCAGTAGCTGTTACAGTTACGGTTCTCTCAGTCCGCCAACACATTCACCCGTCCAACAATCAAGACATCCACATTCACATTCGCAACATCATCAGCACCAAGTGACACAGGGTAGTCCTCTTCATTTGCCAACGGCAACTGCGTCAGTTGTCACAGCTCATCATTATTCGAATGCAACGGGCTCGGAACTTTCACCAGAAGGTCACCCGGCTACGGAGGATCAGGAAGATTGTCGAATACCATCAGCGCCGTCCGGTATCTCGACAAGACAACAGCTAATCAACAGCCCCTGTCCCATTTGCGGGGACAAAATTAGCGGATTCCACTATGGCATTTTCTCTTGCGAATCGTGCAAAGGATTTTTTAAGCGCACCGTCCAGAACCGCAAGAACTATGTGTGCCTTAGAGGCGCAGGCTGCCCGGTTACCGTGGCTACGAGGAAGAAATGTCCAGCCTGTCGCTTTGATAAGTGCCTGAACATGGGTATGAAGCTTGAGGCGATCCGGGAGGATCGTACGAGAGGTGGCAGAAGTACCTACCAATGTACGTATACATTGCCTGCCAATCTTGTTGGTAGTCCTGCCGGTGGCATGGCTGGCGACAAAATGACCACCGGGGGCAATTGCAGTCCCGCACCACCTGGTACCGAACACCATTACTCCATCAGGCATCACTCGAATCATTCCCATAAAATGCAAGTGGTGCCACAACTTTTACAAGACATTATGGATGTCGAGCATCTTTGGCACTATAACGACAACGATCGCATCACCAGTGGACAAAGTGCCAGTGGCGTTGGTGGGACTGTTAATCCTGGTAAAAGTAACTGTGTACCGGATTCGATGCTTGTTGGAGTAGGAGCTAGCGGGGCTAGCTCAACAGGTGCAGGCTCTATCACTAACGATGGAAACGGCGGAGGACCAGGTGTAGAATGCTCGTCGAACGGTACTCCCGGAAATGGTAATCCCAGTAGTAGAAGAACAGATACTTCGAGGCCCTGCTCAACTGGACCACCGGGAATCGGTGGTCACGAGCAACGTTCCCAATCTGTCAATACCGCTAGCAATGGCAATTCTCAGATCAGTAACAACACAAACGGAAATCCTACGCAACATCCTGATTTTCTCTCGAACCTCTGTAATATTGCCGATCATCGGCTCTATAAAATAGTCAAGTGGTGTAAGAGCTTACCGCTCTTCAAAAACATCTCGATTGACGATCAAATCTGTTTACTCATCAACTCGTGGTGCGAGCTTCTGCTTTTTTCGTGCTGCTTTCGCAGCATGAGTACGCCTGGTGAAATCAGAGTGTCTCTCGGCAAGTCGATTACCCTGGAGCAGGCTAAACAGCTTGGTTTAGCGACCTGCATCGAGAGGATGCTTGCTTTTACAAACAATTTGAGACGTCTCAGGGTGGATCAATACGAATACGTTGCAATGAAGGTGATTGTTCTGTTAACGTCTGACACGAGCGAATTAAAAGAACCGGAAAAAGTGAGGGCGTCACAGGAAAAAGCTTTGCAAGCGCTACAACAATATACCATCGCAAGGTATCCAGAAATGCCAGCGAAATTCGGTGAACTTTTACTAAGAATTCCAGATCTACAAAGAACGTGTCAAGCAGGCAAGGAATTATTAAGCGCGAAGCGCGCCGAAGGGGAAGGCAGCTCCTTCAATTTGTTGATGGAATTGTTGAGAGGAGACCATTGA
- Protein Sequence
- MSEQNGPNEGPGPGPGPGPGPGWWPAAQPWKSTCSASSTAGSSSAGSSANPVVSASVSASCVTSSSPVSSSGSTPSSSACPSSSSVGPSCTITPARSSEAGKNVSVTTINVPPNQEMHDGKGVCKYRGGQNGVTVSVVSSCGSVLGCGNASVASTTDVTSSSSSNSGPHSIGIGIGVSIHGPPNIADIDDADDSDGEISKIDFRGVNLRTKKKRDACGSQSGDKIGDGDVDTDGNGCCDGSDSAQQQQPERPMSWEGELSDQEMSSNTITNQDPHEETSMEGVQVCGASPGPVEQKFPIKPEPDFRSSPGFAFGSFHEAGQPLHSQQMQHQQQQQQRGIENLEQAQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQSRHPHSHSQHHQHQVTQGSPLHLPTATASVVTAHHYSNATGSELSPEGHPATEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMAGDKMTTGGNCSPAPPGTEHHYSIRHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRITSGQSASGVGGTVNPGKSNCVPDSMLVGVGASGASSTGAGSITNDGNGGGPGVECSSNGTPGNGNPSSRRTDTSRPCSTGPPGIGGHEQRSQSVNTASNGNSQISNNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQAKQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733987;
- 90% Identity
- iTF_01498275;
- 80% Identity
- iTF_01498275;