Tatt005748.1
Basic Information
- Insect
- Trypoxylon attenuatum
- Gene Symbol
- retn_1
- Assembly
- GCA_963989405.1
- Location
- OZ022489.1:34467922-34486240[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-26 9.1e-23 80.6 0.0 2 89 37 122 36 122 0.96
Sequence Information
- Coding Sequence
- ATGAGGCCAATTGCATCGGCGGCTGCATCATCATCATGCGATACTCGATGCAGTCGTGTGGATCCATTATATTATCGAGCGCTCTACGAGATTAACGACGACCCCAAGCGGAAGGAATTCCTCGACGACCTCTTCAGTTACATGCAGAAACGAGGAACGCCGATCAATCGACTGCCCATTATGGCCAAGTCCGTCCTGGATCTCTACGAGCTGTACAACTTGGTGATCGCACGGGGTGGTCTCGTCGATGTGATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTTCACCTGCCCTCGAGCATCACTTCCGCCGCGTTCACTCTGCGCACTCAGTACATGAAATACTTGTATCCGTACGAGTGTGAGAAGAGGCGATTGTCGACCCCAGCAGAATTGCAAGCGGCGATCGACGGAAATCGACGAGAAGGCAGGAGAAGCAGCTATGGTGCTTACGCGGGAGGTGGAGGAGGCGGCGACAGTTTGGTTCAAAGGAATCCGCACACGCCGAATTCGTTGGCCTTGCACGCTCAAATGTCACCCCTCTCACTGGTGACCGCAGTCGCAGCTGGAGGACAGCATCATGGGCCGCAAGCTCTTGTCAACGGAAGTGCGGCACACACTCCTCTACCTCATCATCCACATCATCCACAGCATCCCCAAGGACCCCTTGGCCAGCCACCAAACGCCGGACCAATTCCTGGTATGGCACCCTCCGAATTCGAAGCACGTATGGTGGAATACGTGAAATTACTGAACAAAGAGCTAAGAGGAGCAGGCGGAGTCACACCCCCGCCAATGATCCATCGACAGGGTAGTGCCTCGCCACCATCCTCGACACCACCGCGGGACAGCGCGCTCAGTGCTCTCGAAATGTCCCGTTTGACCCTCTGGAATATGTACAACAATAACACCCTCTATCCTGGGGTAGGACATCAGCCACCTCTTTCTCCACAGGCCTCGCACTCCCCAGTACCTCCAGCATCGAGTCCAGAACCACAACGAGAAGCTCTTGATTTGGGGCTCAGGTCATCACCCACGTCTTCTTCACCACCTAGGCAAAGTCCACCCTCGTCCGGTGGCAGTATTCAAGTGAAGAGGGATCCGGAACTAACGAGTATACCGGGGCCACCGCCAGCGAAAAGGCTACTCTCGGACGACGACAGTCCCCCCGAAAAGAACTCGGCATCGCTGGGGACgcatattaaaatttccaaCCGAGGTGACGGTAGAAACGGAGACAATTCTTTGGTGGTCAGTATGGAGCTGAACGGCGTGATGTACCAAGGGGTCCTTTTCGCTCAGACTGACAGTAGGACCGCTACGAGTGCGGCGACCAACAACAATACGAAAACATCGCGAAGCAGCATCGTCTCGTGA
- Protein Sequence
- MRPIASAAASSSCDTRCSRVDPLYYRALYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGGGGGDSLVQRNPHTPNSLALHAQMSPLSLVTAVAAGGQHHGPQALVNGSAAHTPLPHHPHHPQHPQGPLGQPPNAGPIPGMAPSEFEARMVEYVKLLNKELRGAGGVTPPPMIHRQGSASPPSSTPPRDSALSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQASHSPVPPASSPEPQREALDLGLRSSPTSSSPPRQSPPSSGGSIQVKRDPELTSIPGPPPAKRLLSDDDSPPEKNSASLGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDSRTATSAATNNNTKTSRSSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_00360003;
- 80% Identity
- -