Tjap007712.1
Basic Information
- Insect
- Trissolcus japonicus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030522925.1
- Location
- JAPYZS010000337.1:7800-10753[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-116 2.2e-111 372.6 32.8 1 300 29 326 29 326 0.97 2 2 0.0051 1.4e+02 2.2 3.6 196 237 359 399 327 401 0.53
Sequence Information
- Coding Sequence
- ATGGAACCGTCCGTCGCCGGACGAAGGCGCAATGCCACCAAGCACTCCGCCGAGGATCAGGCGCTGGATCAAATTGCCAAGgagGCGGAAGCAAGATTAGCTGCTCGGAGGTTAGCAAGAGCGGAAGCAAGGGAAATCAGAATGCGCGAGCTGGAAAGACAACAGAAGGAAGCCGAGGAAAATGCCGACAGAGTTTACGACATGAATGCAGATAGCAACAGAGTGCTGAGAGTCACTCCCGACCCGATGCGAACTTCCCGTCTGTTGACGAATTCAAATAACTTTCAGTCCAGCAGAAGATCGTCTGAGGATTCGTTGGAGGATGCTGGTCTTGGTAAAGATCTGAGAtCGGAGCTAAAAGAATTCGAAGAAAAATTCAGGAAAGCAATGATCGCGAACGCTCAGCTGGACAATGAAAAGTCGTCGTACGCCTATCAGGTTGACTTGCTGAAGGACAAACTCGAGGAGCTGGAGGAGACGATCGCTCAACTGAGACGCGAACTTCGCGAGAAAAATCGCGAGGCAGAACAGCTGAAGCGCACGAGTCAACGATTGAAGGAGGATTATGATATCTGTAAAGCTCAGCTAACAGAGAGAGATACACTCATAGAGgaAAACGGACTTGTCATCGTAGAAGATGAAGGAAGCGAAAATGAGGACACGCCAAAAGAGAACGGTCCGGTTTGCAGAAAGAGAGTACTAGTCAGTACCGAAGCAGCGGAGTTACTACAAAATGCAGGCGAAGGGTCCTTAGacgTTAGACTGAGAAAATTCGCAGCCGAGAAGAAGGAGCTACAAGATGAAATACGACACCTGAGGTTAGAGCTCGAGGAAGCTAGAAATCGTATGAGGGCCGAACGTTCGCCAGGTTCAATCATAGGTGTCTTTTCCGACTCGGATGACGTTCAACGTGAGGCCAACAAGCTTCTGGCggattacaaatttaaactgCAGAAGGCCGAGCAAGACATGTCAACATTGCAGGCCACTGTGGCCAGACTGGAAAGTCAAGTTATACGATACAAGTCGGCCGCAGAAGCTTCGGAAAAAGTAGAGGACGAATTAAAGGTCGAGAAGAGAAAATTACAAAGAGAAgttcGAGAATCTCAAGCCCGCGTAGAGGAGCTCGAGACGGCGAACTCGCATCTGCAACGGCGACtagacaaattgaaaaacgcaAAATCGGCCCTACTAAAAGAGCTCTGA
- Protein Sequence
- MEPSVAGRRRNATKHSAEDQALDQIAKEAEARLAARRLARAEAREIRMRELERQQKEAEENADRVYDMNADSNRVLRVTPDPMRTSRLLTNSNNFQSSRRSSEDSLEDAGLGKDLRSELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETIAQLRRELREKNREAEQLKRTSQRLKEDYDICKAQLTERDTLIEENGLVIVEDEGSENEDTPKENGPVCRKRVLVSTEAAELLQNAGEGSLDVRLRKFAAEKKELQDEIRHLRLELEEARNRMRAERSPGSIIGVFSDSDDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKVEDELKVEKRKLQREVRESQARVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01492887;
- 80% Identity
- -