Tbro004344.1
Basic Information
- Insect
- Trissolcus brochymenae
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030523145.1
- Location
- JAQQRF010000137.1:82661-85719[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-116 2.2e-111 372.4 32.8 1 300 29 326 29 326 0.97 2 2 0.0051 1.3e+02 2.2 3.6 196 237 359 399 327 401 0.53
Sequence Information
- Coding Sequence
- ATGGAACCGTCCGTCGCCGGACGAAGGCGCAATGCCACCAAGCACTCGGCTGAGGATCAGGCGCTGGATCAAATTGCCAAGGAgGCGGAAGCAAGATTAGCTGCTCGGAGGTTAGCAAGAGCGGAAGCAAGGGAAATCAGAATGCGCGAGCTGGAAAGACAACAGAAAGAAGCCGAGGAAAATGCCGACAGAGTTTACGACATGAATGCAGATAGCAACAGAGTACTGAGAGTGACTCCCGACCCGATGCGAACTTCCCGTCTGTTGAcgaattcaaataactttcaGTCTAGCAGAAGATCGTCCGAGGATTCATTGGAAGATGCTGGTCTTGGCAAAGATCTGAGaTCGGAGCTGAAAGAATTTGAGGAAAAGTTCAGGAAAGCAATGATCGCGAATGCCCAGCTGGACAATGAAAAGTCGTCGTACGCCTATCAGGTTGACTTGCTGAAAGACAAACTCGAGGAGCTGGAGGAGACGATCGCTCAACTGAGACGCGAACTTCGCGAGAAAAATCGCGAGGCAGAACAATTGAAGCGCACGAGTCAACGATTAAAGGAAGATTATGATATTTGTAAAGCTCAGCTAACAGAAAGGGATACACTCATAGAGGAAAACGGACTTGTTATCGTAGAAGATGAAGGAAGCGAAAATGAGGACGCGCCAAAAGAGAATGGTCCGGTTTGCAGAAAGAGAGTACTAGTCAGTACCGAAGCAGCAGAGTTACTACAAAATGCAGGCGAGGGATCCCTAGacGTTAGACTGAGAAAATTCGCAGCTGAAAAAAAGGAGCTACAAGATGAAATACGACACCTGAGGTTAGAGCTCGAGGAAGCTAGAAATCGTATGAGGGCCGAACGTTCGCCAGGTTCGATCATAGGTGTCTTTTCCGACTCGGATGACGTTCAACGTGAGGCCAACAAGCTTCTGGCggattacaaatttaaactgCAGAAGGCCGAGCAAGACATGTCAACTTTGCAGGCTACCGTAGCCAGATTGGAAAGCCAAGTTATACGATACAAGTCGGCCGCAGAAGCGTCCGAAAAAGTAGAGGACGAgctaaaagttgaaaagagaaaattgcAAAGAGAAgtccGAGAATCCCAAGCCCGTGTGGAGGAGCTCGAGACGGCGAATTCGCATCTGCAACGACGActagacaaattgaaaaacgcAAAATCGGCCCTACTGAAAGAGCTCTGA
- Protein Sequence
- MEPSVAGRRRNATKHSAEDQALDQIAKEAEARLAARRLARAEAREIRMRELERQQKEAEENADRVYDMNADSNRVLRVTPDPMRTSRLLTNSNNFQSSRRSSEDSLEDAGLGKDLRSELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETIAQLRRELREKNREAEQLKRTSQRLKEDYDICKAQLTERDTLIEENGLVIVEDEGSENEDAPKENGPVCRKRVLVSTEAAELLQNAGEGSLDVRLRKFAAEKKELQDEIRHLRLELEEARNRMRAERSPGSIIGVFSDSDDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKVEDELKVEKRKLQREVRESQARVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01493585;
- 80% Identity
- -