Tjap014221.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trissolcus japonicus
Gene Symbol
tfip11
Assembly
GCA_030522925.1
Location
JAPYZS010001748.1:4758-7250[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-91 1.8e-87 294.0 14.2 1 275 392 659 392 659 0.98
2 2 0.015 2e+02 2.0 0.1 243 273 672 702 663 704 0.82

Sequence Information

Coding Sequence
ATGTCAGACGACGAGATGGAACGCTTTGAGATCACAGATTATGATCTGGACAATGAGTTCAACATGAACCGTCCGAGAAAGAAGCTGACAAAAAGTCAACAAATGCTGGGGATATGGGCTGAGAGCGACGAGGAAGACGCCCGGCCGTCTTTCAAGATGGCAAACAAAAAGCCAAAGAATTACAGCGCGCCCGTGAGTTTCGTCGCGGGGGGCATCCAACAAGCCGGACAACCAAAGACGGAAGAGAAAAAGGCCGAAGAAGAAAATGAGGAAAGCGCTGACGAGGGGAGCAAATTTGGCCGAGGCTCTTCAAGCGACTCCGATAATGAGCGCCCCACTATGTGCCCAAAATCTAGGGGCAGATTTTCGTTACACACAGACGCTGATATCGCTGGGTTGAGAAAGAAACGTAGCTTCAATCCCAAGCTGGCGGAAAAAGGCGTCGGCAGCTGGGAAGTTCACACTAAAGGAATCGGAGCAAAACTTCTTCTCCAGATGGGTTTCCAACCTGGAAAAGGTTTAGGCAAACAGTTGCAGGGTATCAGCGCCCCAGTGGAAGCTCACGTGAGAAAAGGCCGAGGTGCGATTGGCGCTTATGGGCCGGAAAAAGTGGCAAAAGTGGGTAAGCTGTTGGACGAGCAAGGAGACGACCAGGAGATGAAAGGAGAGAGCAAAGCCAAAAGCTCACAATGGCGGAAAGCTGACGCTAAGAAGAAGGTGAGCTACGCTTATAGGAGCGTGGATCAGCTGTTGGAAGATTCAAAATCGAAGCCCCTGAGAAAGGGCGGGAAGGTGGTGACTGAGATGAGCAAGGTCAAAGTCATCGACATGACAGGGCCGGAGCAGAGAGTTCTGAGTGGTTACCACGCGATAGCAAGCAGTCACCAGCGACCTGACGATTCGGTGGTCAGCGCCCCTGTAGAGAAAAAGACGTGCCAGCATTTTGCTCTGCCTGAACTGACCCACAACTTGAGCATCCTGGTGGATCTTTGCGAACAGGATATCATCCAAAATGACAGGAAGAAACGGTACCTGAGCGACAGGATTGTCGCGTTGGATGCCGAGAAGAAGGCTCTCGGGAAAACAATGAACCACACTGAGATGCTGATGAAGAACACCGAATATGTGCTCGGGGTTGTGGAGAAACTAACTGACCCCATGAACGAGGTGTCGTTGAGTGAAACTGCTGAGGCGTTTAAGAACCTGCAAGATAATTATTACGAGGAGTACAAGATGTTCGATCTGGGCAACCTTGCGAGCAGTTTGGTGGGTTCGAAGATGAAGTGTCATCTCGCTAAGTGGAACCCTCTGAGCCAACCGAATTATCCCCTCAAGTTGTTCAAGGAATGGAAGGACATCCTCGAGTGCGGTAAAAGCACTTTACAACCCGGGGCCATGAACCCCTACGACCAGCTGGTTTGGCACTCCCTCATGCCGTCAATTCGAGGCGCCATTCACCAATGGGACTGCCGTCATCCTGAGGATCTCATCGTCTTCTTAGAAGACTGGCTCACCCTCATCCCCAACTGGATCCTTGAGAACATCCTGGATCTACAGGTACTTCCAAAACTCACTCTCGAAGTTGAGGACTGGAACCCCGTGATCGACACCGTGCCCATCCACACCTGGATCCATCCGTGGTTGCCACTAATCAGAAACAGATTGGGCACGGAGATCTATCCCATCATCAGGAGGAAACTCGGCTCGGCTCTCGGTGGTTGGCATCCCTCTGACAGATCGGCCAGACTCATGCTAGAACCCTGGTCTCAGGTCTTTTCGAAAAATGACATGGAAGCCTTTCTGGTCAAGAACATCGTGCCAAAACTACAGGTTGCTTTGTCAGAATTTGTCATCAATCCACATCAGCAACACCTCGACCACTGGAACTGGGTTATCGAGTGGAAACAACTGCTTCCTCTGCACACCATGGCCAATCTCCTTGACAAATTCTTCTTTCCGAAGTGGCTCCAGGTATTGGCCATGTGGCTCAACCATAATCCCAATTACGAACAGATCACGAACTGGTACGTCGGATGGAAAGGCATGCTGGACAACAAACTGCTCGCTGAACCGGTCATCAAGGAGCATTTCAACAAAGCTCTCGACATGATGAACAGGGCTGTCGCGTCGCCTCAGGCCCTGCCCCCGGGCGCTGCCGAACAGGTCTCCTACCTCACCAGCATCGAGAGAAATCACGCCCAGGTGCAGCCGCAAATCTCCTCGGCTGCCCAGCCAAGGATCGATCGACTAGCCGAGGCTGTGAAAACGGCCGTCCAGATCCCGCAAGGCTTCAAGGATCTCGTCCAGAAGAAGTGCGAGGAGAGGGGCATCCTGTTTATGCCAATCCCGAACAAACACAGGGAAGGCAAGGTCGTGtacaaaattggaaatttacAGGCGTACATCGACGGTAACACGCTCTTTGCTTGTCATAACGGAATCAACTGGATACCTACAAGTTTGAATACTTTGCTGGATACAGCGGAGGATTGA
Protein Sequence
MSDDEMERFEITDYDLDNEFNMNRPRKKLTKSQQMLGIWAESDEEDARPSFKMANKKPKNYSAPVSFVAGGIQQAGQPKTEEKKAEEENEESADEGSKFGRGSSSDSDNERPTMCPKSRGRFSLHTDADIAGLRKKRSFNPKLAEKGVGSWEVHTKGIGAKLLLQMGFQPGKGLGKQLQGISAPVEAHVRKGRGAIGAYGPEKVAKVGKLLDEQGDDQEMKGESKAKSSQWRKADAKKKVSYAYRSVDQLLEDSKSKPLRKGGKVVTEMSKVKVIDMTGPEQRVLSGYHAIASSHQRPDDSVVSAPVEKKTCQHFALPELTHNLSILVDLCEQDIIQNDRKKRYLSDRIVALDAEKKALGKTMNHTEMLMKNTEYVLGVVEKLTDPMNEVSLSETAEAFKNLQDNYYEEYKMFDLGNLASSLVGSKMKCHLAKWNPLSQPNYPLKLFKEWKDILECGKSTLQPGAMNPYDQLVWHSLMPSIRGAIHQWDCRHPEDLIVFLEDWLTLIPNWILENILDLQVLPKLTLEVEDWNPVIDTVPIHTWIHPWLPLIRNRLGTEIYPIIRRKLGSALGGWHPSDRSARLMLEPWSQVFSKNDMEAFLVKNIVPKLQVALSEFVINPHQQHLDHWNWVIEWKQLLPLHTMANLLDKFFFPKWLQVLAMWLNHNPNYEQITNWYVGWKGMLDNKLLAEPVIKEHFNKALDMMNRAVASPQALPPGAAEQVSYLTSIERNHAQVQPQISSAAQPRIDRLAEAVKTAVQIPQGFKDLVQKKCEERGILFMPIPNKHREGKVVYKIGNLQAYIDGNTLFACHNGINWIPTSLNTLLDTAED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01492885;
90% Identity
iTF_01492885;
80% Identity
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