Tbro003469.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trissolcus brochymenae
Gene Symbol
tfip11
Assembly
GCA_030523145.1
Location
JAQQRF010000097.1:43337-45820[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.6e-92 8.5e-88 295.0 15.0 1 275 389 656 389 656 0.98
2 2 0.0099 1.3e+02 2.5 0.1 243 273 669 699 660 703 0.79

Sequence Information

Coding Sequence
atgtcAGACGACGAGATGGAACGTTTTGAGATCACAGACTATGATCTGGACAATGAGTTCAACATGAACCGTCCAAGGAAGAAGCTCACAAAAAGTCAACAAATGTTGGGAATATGGGCCGAGAGCGACGAAGAAGACGCCAGGCCGTCTTTCAAGATGGCAAACAAGAAGCCAAAGAATTACAGTGCACCTGTGAGTTTCGTCGCGGGAGGAATTCAACAAGCCGGACAACCAAAGACTGAAGAGAAAAAGGACGAAGAAATGGAAGATAGTGCTGATGAAGGGAGCAAATTTGGCCGAGGCTCATCAAGCGACTCCGAGAATGAACGCCCCTCAATGTCAACAAAATCTCGGCCTAGGTTCAGCTTGCACACAGATGCCGACATTGCCGggttaagaaaaaaacgtaACTTCAATCCCAAGCTGGCAGAAAAGGGTGTGGGCAGTTGGGAAGTTCACACCAAGGGAATCGGAGCAAAACTTCTTCTTCAGATGGGTTTCCAGCCTGGAAAAGGTTTAGGCAAACAGTTGCAGGGTATCAATGCCCCGGTGGAAGCTCACGTAAGAAAAGGTCGAGGTGCCATCGGTGCTTATGGACCggaaaaagttgcaaaagtAGGTAAGCTGTTGGACGAGCAAGATGACCAGGAGATGAAAGGAGAGAGCAAAGCTAAAACGTCACAATGGCGAAAGGCAGACGCGAAGAAGAAGGTGACTTATGCTTATAGGAGCGTGGATCAGTTATTAGAAGATTCAAAATCGAAACCCATGAGAAAAGGGGGAAACGTGGTCACTGAGATGAGCAAAGTCAAGGTCATTGATATGACAGGACCGGAGCAGAGGGTCCTGAGTGGTTACCATGCGATTGCAAGCAGTCACCAGCGGCCTGACGATTCAGTGGTCGCCCCTGCAGAGAAAAAGACATGTCAACATTTTGCCCTGCCTGAACTAACCCACAATTTGAGTATCCTGGTAGATCTTTGCGAGCAGGatatcattcaaaatgacAGGAAAAAAAGGTACCTCAGCGACAGGATAGTCGCCTTGGATGCCGAGAAGAAGGCTCTTtctaaaacaacaaatcacACTGAAATGCTGATGAAGAACACCGAATATGTACTCGGGATTGTGGAGAAACTGACAGACCCCATGAACGAGGTGTCGTTGAGTGAAACCGCTGAGGCATTTAAGAATCTGCAAGATAATTATTACGAGGAATACAAGATGTTCGATCTGGGTAATTTCGCGAGCAGTTTGGTGGGTTCGAAAATGAAGAGCCATCTGGCTAAGTGGAACCCCTTGAACCAACCGAATTATCCCCTTAAGTTGTTCAAAGAATGGAAGGACATCCTCGAGTGTGGCAAAAGCACATTACAAACTGGGGCGATGAACCCTTACGACCAACTGGTTTGGCATTCCCTCATGCCTTCGATTCGAGGCGCCATTCACCAGTGGGACTGCCGTCATCCAGAGGAGCTCATCGTCTTCCTAGAAGATTGGCTCACTCTCATCCCCAACTGGATCCTTGAAAACATCCTGGATCTACAAGTACTTCCAAAGCTCACCCTCGAAGTGGAGGACTGGAACCCTGTGATTGACACCGTACCTATCCACACTTGGATTCATCCGTGGCTGCCTTTGATCAGAAACAGATTAGGCACAGAGATCTACCCCATTATTAGGAGGAAACTCGGCTCTGCTCTCGGCGGTTGGCATCCCTCAGACAGATCGGCTAGACTCATGCTAGAACCCTGGTCTCAAGTCTTTTCTAAGAACGATATGGAAGCCTTCTTGGTCAAAAACATTGTGCCAAAATTGCAGGTTGCATTGTCCGAATTTGTCATCAACCCGCATCAGCAACACCTCGACCACTGGAACTGGGTGATCGAGTGGAAGCAACTGCTCCCTCTGCACACCATGGCCAAACTCCTTGACAAGTTTTTCTTTCCGAAATGGCTCCAGGTATTGGCAATGTGGCTCAATCACAATCCCAATTACGAACAGATCACAAACTGGTACGTCGGATGGAAAGGCATGTTGGATAACAAACTGCTCGCTGAACCGGCCATCAAGGAACATTTCAACAAAGCTCTCGACATGATGAACAGAGCTGTCGCGTCACCTCAGGCTCTGCCTCCGGGTGCGGCCGAACAAGTCTCGTACCTCACCAGCATTGAAAGAAATCAGGCCCAAGTGCAGCCGCAGATCTCCTCGGCTGCCCAGCCGAGAATCGACCGACTAGCCGAGGCTGTTAAAACGGCCGTTCAGATCCCACAAGGTTTCAAGGATCTGGTCCAGAAGAAGTGCGAGGAGAGGGGCATCTTGTTTATGCCGATCCCGAACAAACATAGGGAAGGCAAAGTCGTCTATAAAATTGGCAAGATACAGGCGTATATTGACGGTAACACGCTTTTCGCCTGTCACAACGGAGTCAACTGGATACCGACAAGTTTAAATACTTTGCTCGATATTGCAGAGGATTAA
Protein Sequence
MSDDEMERFEITDYDLDNEFNMNRPRKKLTKSQQMLGIWAESDEEDARPSFKMANKKPKNYSAPVSFVAGGIQQAGQPKTEEKKDEEMEDSADEGSKFGRGSSSDSENERPSMSTKSRPRFSLHTDADIAGLRKKRNFNPKLAEKGVGSWEVHTKGIGAKLLLQMGFQPGKGLGKQLQGINAPVEAHVRKGRGAIGAYGPEKVAKVGKLLDEQDDQEMKGESKAKTSQWRKADAKKKVTYAYRSVDQLLEDSKSKPMRKGGNVVTEMSKVKVIDMTGPEQRVLSGYHAIASSHQRPDDSVVAPAEKKTCQHFALPELTHNLSILVDLCEQDIIQNDRKKRYLSDRIVALDAEKKALSKTTNHTEMLMKNTEYVLGIVEKLTDPMNEVSLSETAEAFKNLQDNYYEEYKMFDLGNFASSLVGSKMKSHLAKWNPLNQPNYPLKLFKEWKDILECGKSTLQTGAMNPYDQLVWHSLMPSIRGAIHQWDCRHPEELIVFLEDWLTLIPNWILENILDLQVLPKLTLEVEDWNPVIDTVPIHTWIHPWLPLIRNRLGTEIYPIIRRKLGSALGGWHPSDRSARLMLEPWSQVFSKNDMEAFLVKNIVPKLQVALSEFVINPHQQHLDHWNWVIEWKQLLPLHTMAKLLDKFFFPKWLQVLAMWLNHNPNYEQITNWYVGWKGMLDNKLLAEPAIKEHFNKALDMMNRAVASPQALPPGAAEQVSYLTSIERNQAQVQPQISSAAQPRIDRLAEAVKTAVQIPQGFKDLVQKKCEERGILFMPIPNKHREGKVVYKIGKIQAYIDGNTLFACHNGVNWIPTSLNTLLDIAED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01493583;
90% Identity
iTF_01493583;
80% Identity
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