Tper007123.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trionymus perrisii
Gene Symbol
stc
Assembly
GCA_900050545.1
Location
FIZV01025679.1:25863-29770[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.91 2.5e+04 -4.0 1.6 15 19 256 260 255 260 0.81
2 15 0.053 1.5e+03 -0.0 0.1 4 10 290 296 289 297 0.94
3 15 2.4e-07 0.0068 17.0 14.2 3 19 310 326 309 326 0.93
4 15 2.2e-09 6.1e-05 23.5 9.6 1 18 362 379 362 380 0.98
5 15 3.4e-06 0.094 13.4 11.5 1 19 418 436 418 436 0.98
6 15 0.06 1.7e+03 -0.2 0.5 5 10 466 471 466 472 0.96
7 15 4e-07 0.011 16.4 11.0 4 19 484 499 477 499 0.87
8 15 1 2.8e+04 -4.2 2.3 6 10 528 532 527 532 0.88
9 15 0.00031 8.5 7.1 8.2 1 11 538 548 538 549 0.97
10 15 0.78 2.1e+04 -3.8 1.5 4 10 553 559 552 559 0.86
11 15 2.5e-07 0.0069 17.0 11.4 1 18 565 582 565 583 0.97
12 15 0.51 1.4e+04 -3.2 1.0 6 10 612 616 611 617 0.66
13 15 1 2.8e+04 -5.6 10.1 8 18 628 639 619 640 0.75
14 15 1.8e-07 0.005 17.4 9.8 1 16 676 691 676 702 0.89
15 15 8.4e-06 0.23 12.1 14.3 1 19 708 727 708 727 0.97

Sequence Information

Coding Sequence
ATGAgccaaaatttggaagaaattttcaccaaagcAGCTAGTTCTAATTTAACAGCCACTGCTGAAGAATTCGTACCCAGAACGGCGTCAAATTTTCCTACAAATCGTAATTCAAATTCGACAGAAGATATGGATAATAATAggtACGACTACAGGAATCAAAGATATGATAGAAGACATCCTTATTATGAGAACAATACGTATTACAATCGGGGCCGAAGTGGACAATCGTCTAGTAGTTCTTACTTTAATAAACCTGCACCAAAAGGCAGAGATAACAGGAATGAATTTGATAATGGTTACGCTGAATCTTCCACTTATTACGGCGGTTCTTTTAATTCTCGTTATGACAATTCTAAGCGATACCCTTCGGATCATAAGAACAATTACAGGAATCcccatgtaaaaaaaagggatttcaattatgatgatgatgaagagTATGATGACAGATACCAGCAAAACTCTCGttataatgtttttgaaaaccgAAACCACAGGTCGAATTCTTCCAGTAATTCTACCAATAAATCCCACGATACGAATGGATCCGTTAATAACATCAATAAAAaaaaatcaacaatctGTCAACGAGAAAGATTAACAGAACAACTGAACGATGGTATTTTAGAATGTTTGGTTTGCTGTGAACGGATCAAACAACGTGAAGCGGTCTGGAGTTGTTCAAATTGTTATCACGTCTTGCATTTGTGGTGTGTCACCAAATGGgcaaaatcttccaaaaatgACAATAATAACTGGAGATGTCCAGCCTGCCAAAATGAAAGCGTCCAGATACCTGAAAAATACTTGtgtttttgtggaaaatctAGACTACAAGCAGAATGGAATCGTAACGACACGGCTCATTCTTGCGGTGAAATATGCGgtaaaagtaaagaaaatccGACTACGTGGTTTATATGCGAACATAAATGTAACTTGTTATGTCACCCTGGACCCTGTCCTTCATGTACCCTTCAAGTGACTCGggaGTGTGGATGTGGTCGAAGTACCCGGACCGTACAATGTAGTTTTAAAACTCCAATTCTTTGCGGATCAGTTTGCGATCGGTTACTGAATTGTGGTATTCATCGATGTTTGAAAACATGCCATTTTGGGGAATGTGAACCATGTGatatgaaaatagaaaaagcgTGTTATTGTAATAAACTGAAGAAAGAATTGACGTGCGGTTCGCaagaacaagaaaatttcagttgcGGAGAAAAATGCGACAAAACTCTGACCTGTGGTAATCATAAATGTGATCTTATTTGTCACCAAGAAGAATGTGGTCTCTGCCCAAAATCACCGATAGTGGTGAATTCGTGTTGTTGCGGTAAAACTCCAATAACAGAAAACACCCGTCAGTCGTGTTTGGATCCGATGCCGACTTGTGAGCAAATTTGTGGGAAACGTTTGCCTTGTGGGTCGCCGAGTAAACCTCATTTTTGCGAATCAGTATGTCATGATGGTGACTGTAATCCATGTAAGAAGAATACTTTCATGAGGTGTCGTTGTGGAGCTAAAGAAATGTCGATACCTTGTTCTAAGCTTAATAAAAATGCCGAATTCGAGTGTCAAAAGAAGTGTAATAAGAAACGATCATGTGGAAAACATAAATGCAATAAGCTATGTTGTATCGATGTAGAACATATTTGTCCTCAACGCTGTACAGGTACTCTGAGTTGTGGTAAACATCAATGTGATATTTTATGTCATCGGGGCAAATGTGGACGTTGCCTGCAAAGCAgttttgaagaactgtactgcCACTGCGGACATTCTGTGATTTACCCACCAGTACCATGTGGAACGAAACCTCCTGCTTGTGATCAGCCATGTCAACGTCAACACGACTGCGAACATCAGCCTTTACACGTTTGTCATTCCGATCGTAGCTGTCCACCCTGTATAGTATTTACTGATAAACTTTGTTACGGTGGTCACGAGTTGCGCAAAACCATTCCCTGTTACCAAAAAGAGTTCTCTTGCGGACTACCATGTGGCCGACCTTTACCGTGCGGATTTCACAGATGTCAAGTGCCATGTCACGCCGGAGATTGCTTGaccgtttcaaaaaaatgtacgcaACCTTGCACGAAACCACGTGATTTATGCGGGCATCCGTGTAACGCGCCATGTCACACCGGGTATTGTCCCGATACACCGTGTCGTGAAATGGTCAAAGTGACGTGCGCCTGCGGTAATTTGGTCGCCGATCACCACTGTTACGAGCATACGGACGATTATAGACGTATCGTTTCTGCAACCCTGGCGGctaaaatgaacgaattgCAGATAGAGAATTCGGTCAATATACAAGATATTTCCGATAAAATTAACGCCGAGAAGGTCAACTTGAGGACCCTTGAATGCTCCGATGAGTGCAAGTTGATTATGCGCAATCGTCGATTAGCTTTAGCTCTTCAAATACAGAACCCTGACTTGAGTGCTAAATTAACACCGCGGTATTCGGACTTCATGAAGAGTTGGGTTAAAAAAGATGCGAATTTTTGTCGCCACGTTCATGAGAAACTTACAGCTTTAGTGAAATTAGCTAAAGAGTCTAAACAGAAAAGCAGAAGTTTTTCGTTCGAAGTTATGAATAAAGAAAAACGTCAATTTGTACACGAATATTGTGCTCATTTCGGCTGTGAATCGGAAGCATATGATGCAGAACCTAAACGAAACGTGGTTGCTATTGCTGTTAAAGGAAGGTGTTGGTTACCTGCCTATTCGGTATTAGAAGTTTTGCAACGCGAAAGTGGTCAGCGTAAGGTGCCTTTACCAGTGCTCAATAATAAGAAATTCAGGAACGAAAGTGATACATCGAATGGTTTGCCACCGACAATAATCCTACCTGTGTTACCAAGTGCTAGCTCCAATTCGAGATTTAACTATTTCGGAgattaa
Protein Sequence
MSQNLEEIFTKAASSNLTATAEEFVPRTASNFPTNRNSNSTEDMDNNRYDYRNQRYDRRHPYYENNTYYNRGRSGQSSSSSYFNKPAPKGRDNRNEFDNGYAESSTYYGGSFNSRYDNSKRYPSDHKNNYRNPHVKKRDFNYDDDEEYDDRYQQNSRYNVFENRNHRSNSSSNSTNKSHDTNGSVNNINKKKSTICQRERLTEQLNDGILECLVCCERIKQREAVWSCSNCYHVLHLWCVTKWAKSSKNDNNNWRCPACQNESVQIPEKYLCFCGKSRLQAEWNRNDTAHSCGEICGKSKENPTTWFICEHKCNLLCHPGPCPSCTLQVTRECGCGRSTRTVQCSFKTPILCGSVCDRLLNCGIHRCLKTCHFGECEPCDMKIEKACYCNKLKKELTCGSQEQENFSCGEKCDKTLTCGNHKCDLICHQEECGLCPKSPIVVNSCCCGKTPITENTRQSCLDPMPTCEQICGKRLPCGSPSKPHFCESVCHDGDCNPCKKNTFMRCRCGAKEMSIPCSKLNKNAEFECQKKCNKKRSCGKHKCNKLCCIDVEHICPQRCTGTLSCGKHQCDILCHRGKCGRCLQSSFEELYCHCGHSVIYPPVPCGTKPPACDQPCQRQHDCEHQPLHVCHSDRSCPPCIVFTDKLCYGGHELRKTIPCYQKEFSCGLPCGRPLPCGFHRCQVPCHAGDCLTVSKKCTQPCTKPRDLCGHPCNAPCHTGYCPDTPCREMVKVTCACGNLVADHHCYEHTDDYRRIVSATLAAKMNELQIENSVNIQDISDKINAEKVNLRTLECSDECKLIMRNRRLALALQIQNPDLSAKLTPRYSDFMKSWVKKDANFCRHVHEKLTALVKLAKESKQKSRSFSFEVMNKEKRQFVHEYCAHFGCESEAYDAEPKRNVVAIAVKGRCWLPAYSVLEVLQRESGQRKVPLPVLNNKKFRNESDTSNGLPPTIILPVLPSASSNSRFNYFGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01264087;
90% Identity
iTF_01150911;
80% Identity
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