Tper020626.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_900050545.1
- Location
- FIZV01079709.1:11105-15246[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-92 1.1e-87 294.7 25.6 1 300 30 339 30 339 0.89 2 2 0.054 1.5e+03 -1.2 7.5 120 172 337 389 336 413 0.80
Sequence Information
- Coding Sequence
- ATGGACAGTTACGCCATTGGCGGTCGTAAAAGGGCACCAAGTAATCATACAATCGAAGATCAAGCTTTAGATCAAATCGCTAAACAGGCTGAATGCCGTTTGGCTGCTCGTCGACAAGCTCGTGCTGAAGCTAAAGAAATACGAATGCGTGAAATTGAAAGACAACAAAGGGAAGCCGAAGAAAATGCggacaaaattttcgatataaatagttcagTGGACTCGGCGAATCGTGGATTACGAAATACATCTTGCGTTAATAATAGGAATACCTCTATTATATCATCACCAGTAAGCAACACAAGTAGAAGGAGTTCCGAGGACTCGTTGGAGGATGGATTTAATTATCGAGATATCAAACTAGAACTAAAAGAACTCGAAGAGAAATTTCGTAAAGCCATGATTCAAAATGCTCAGTTAGACAATGAGAAGTCAGCTATTTTATATCaagttgaattattcaaagatAAATATCACGATTTAGAAGCAGCATTTTCAGTATTACAAaaagaaCATAAAGACAAATGCAGAGAACACGAACAGCTGAAAAGATTATTTATCAAGCAAAAAGAAGATTTAGATTTCTTTAGGTCACAATTAGAAGAAAGAGACAGATTGATCGAGGAGCAAGGTTTAGTTGTGATAACAAATGGTGATGAAAATGGTATCCATAGTTCGCTAGAAGACGAGCACAACGATAGCAATCATATTGATTATAAACGAAAATTATCTAATCGAGTATTGATATCATCGCAATCTGCCGAATTGTTGCAGAATTTAGGAGAAGGTTCtttagAtgatagattaaaaaaatacgctcaAGAACGTAAAGAACTTTTAAGTGAAATCAGTAAACTTAAATTAGAATTAGATGAAGAACGAATAAAATCTTCTGGTAATTGCTTCGGTATAATAAATGGTTCCAATAATGATGAATTTGACGAATCaaGAGACGTATCAAGCTTACTCGGAGATTACAAATTCAAGTGGCAAAAAGCCGAACAAGATATATCAACATTGCAAGCTAATGTTGCCCGATTAGAAAGTCAAGTTATTAGGTATAAATCAGCTGCAGAAACGTCAGAGAAAATCGAAGATGaattaaaagtagaaaaaagaaaattacaaagagAGTTACGCGAAGCGCAATCGAGAGTTGAAGAACTGGAGACGACGAATATGCATTTGCAGCGGCGAttggataaattgaaaaatgctaaATCGGCGctgttgaaagaaatttga
- Protein Sequence
- MDSYAIGGRKRAPSNHTIEDQALDQIAKQAECRLAARRQARAEAKEIRMREIERQQREAEENADKIFDINSSVDSANRGLRNTSCVNNRNTSIISSPVSNTSRRSSEDSLEDGFNYRDIKLELKELEEKFRKAMIQNAQLDNEKSAILYQVELFKDKYHDLEAAFSVLQKEHKDKCREHEQLKRLFIKQKEDLDFFRSQLEERDRLIEEQGLVVITNGDENGIHSSLEDEHNDSNHIDYKRKLSNRVLISSQSAELLQNLGEGSLDDRLKKYAQERKELLSEISKLKLELDEERIKSSGNCFGIINGSNNDEFDESRDVSSLLGDYKFKWQKAEQDISTLQANVARLESQVIRYKSAAETSEKIEDELKVEKRKLQRELREAQSRVEELETTNMHLQRRLDKLKNAKSALLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01150345;
- 90% Identity
- iTF_01150345;
- 80% Identity
- -