Tnig014999.1
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010009122.1:11414-15516[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-113 8.7e-109 365.0 34.0 1 300 29 328 29 328 0.96 2 2 0.0022 1.2e+02 3.4 3.1 120 171 326 377 325 384 0.93
Sequence Information
- Coding Sequence
- ATGGAGTCTTCGGTGGCAGGACGAAGGCGAACTGCCACCAAGCACTCTGCCGAGGACCAGGCGCTAGATCAGATCGCCAAAGAGGCAGAAGCAAGACTGGCAGCTCGAAGACAAGCAAGGGCTGAGGCAAGGGAGATTCGAATGAGAGAACTAGAGCGACAGCAAAAAGAGGCTGAGGAGAATGCTGATAGGGTTTACGATATGTGTACAGACAATAATCGACCAATACGGATGACTCCAGATCCTGTGCGGACTTCACGTTTGCTTGGAAATGCCAATAATTTCCAATCAAGTCGAAGATCTTCGGAAGATTCGTTAGAAGATGCGGGCATTATGAAGGATCCTCGAttagAAATGAAGGAGATTgaagaaaaatttcgaaaagccATGATTGCTAATGCCCAGTTAGACAACGAAAAGTCATCATATGCATATCAGGTAGATCTTCTGAAAGATAAACTGGAAGAGCTAGAAGAAACAACAGCTCAACTTAGGCGTGAACTCAGGGAGAAGAATCGAGAAGCCGAGCAGGCAAAGCGTTTAAGTCAGCGCTTGAAAGAAGATTTAGATGTCTGTCAGGCGCAACTTTTAGAAAGGGATACATTAATTCAAGAAAACGGGCTTGTTATAGTAGAAGATGAGGATAGTGATAAAGATGGTGATGATGatactgtaaaaatgaatggacCTTCCAGGCGGAAACGAGTATTAGTCAGTACCGAAGCTGCTGAATTGTTACAAAATGCTGGAGAAGGTTCACTAGATGTTCGACTTCGAAAGTTTGCCTCAGAAAATAAAGAATTGCAGGACGAAGTAAGACATTTGAGGCTAGAATTGGAGGAAGCTAGAAATAGGATGAGGCCTGAAAGGTCGAGTTCCCTCTTGGGTTCTTTTACAGATTCGGATGATATACAACGAGAAACCAATAAGCTATTAGCTGattataagtttaaaattcAGAAGGCCGAACAAGACGTAGCAACGTTGCAAGCAACAGTGGCAAGGTTAGAAAGTCAAGTTATTCGTTATAAATCAGCTGCTGAAGCTTCAGAGAAAGCAGAAGATGATTTAAAAGTGGAAAAGAGAAAACTACAAAGAGAGGTCAGAGAATCACAAAGCCGTGTAGAAGAACTGGAAGTATCTAATTCTCATCTGCAACGTCGATTAGACAAACTTAAGAATGCTAAGGTCGCCTTGTTGAAAGATCTTTGA
- Protein Sequence
- MESSVAGRRRTATKHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTDNNRPIRMTPDPVRTSRLLGNANNFQSSRRSSEDSLEDAGIMKDPRLEMKEIEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETTAQLRRELREKNREAEQAKRLSQRLKEDLDVCQAQLLERDTLIQENGLVIVEDEDSDKDGDDDTVKMNGPSRRKRVLVSTEAAELLQNAGEGSLDVRLRKFASENKELQDEVRHLRLELEEARNRMRPERSSSLLGSFTDSDDIQRETNKLLADYKFKIQKAEQDVATLQATVARLESQVIRYKSAAEASEKAEDDLKVEKRKLQREVRESQSRVEELEVSNSHLQRRLDKLKNAKVALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01488575;
- 80% Identity
- -